RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ANKRD30AQ9BXX3 1397 aa25.15■■□□□ 1.62
PCDHA1-202ENST00000394633 BCORL1Q5H9F3 1711 aa25.15■■□□□ 1.62
PCDHA1-202ENST00000394633 MSH5O43196 834 aa25.14■■□□□ 1.62
PCDHA1-202ENST00000394633 TRAPPC8Q9Y2L5 1435 aa25.14■■□□□ 1.62
PCDHA1-202ENST00000394633 CD109Q6YHK3 1445 aa25.12■■□□□ 1.61
PCDHA1-202ENST00000394633 FANCIQ9NVI1 1328 aa25.11■■□□□ 1.61
PCDHA1-202ENST00000394633 KIF15Q9NS87 1388 aa25.1■■□□□ 1.61
PCDHA1-202ENST00000394633 RSPH4AQ5TD94 716 aa25.09■■□□□ 1.61
PCDHA1-202ENST00000394633 MAST1Q9Y2H9 1570 aa25.09■■□□□ 1.61
PCDHA1-202ENST00000394633 DHX29Q7Z478 1369 aaKnown RBP25.09■■□□□ 1.61
PCDHA1-202ENST00000394633 ANKRD50Q9ULJ7 1429 aa25.08■■□□□ 1.61
PCDHA1-202ENST00000394633 ADGRL1O94910 1474 aa25.07■■□□□ 1.6
PCDHA1-202ENST00000394633 AFAP1Q8N556 730 aa25.07■■□□□ 1.6
PCDHA1-202ENST00000394633 KDM5CP41229 1560 aa25.06■■□□□ 1.6
PCDHA1-202ENST00000394633 USP47Q96K76 1375 aa25.05■■□□□ 1.6
PCDHA1-202ENST00000394633 SCAPERQ9BY12 1400 aa25.03■■□□□ 1.6
PCDHA1-202ENST00000394633 DIP2BQ9P265 1576 aa25.03■■□□□ 1.6
PCDHA1-202ENST00000394633 MAP3K4Q9Y6R4 1608 aa25.03■■□□□ 1.6
PCDHA1-202ENST00000394633 PLXNC1O60486 1568 aa25.02■■□□□ 1.6
PCDHA1-202ENST00000394633 PKD2Q13563 968 aa25.01■■□□□ 1.59
PCDHA1-202ENST00000394633 B4GALNT3Q6L9W6 998 aa25■■□□□ 1.59
PCDHA1-202ENST00000394633 ZFYVE16Q7Z3T8 1539 aa24.99■■□□□ 1.59
PCDHA1-202ENST00000394633 GLI2P10070 1586 aa24.98■■□□□ 1.59
PCDHA1-202ENST00000394633 ZNF326Q5BKZ1 582 aaKnown RBP24.98■■□□□ 1.59
PCDHA1-202ENST00000394633 SMG6Q86US8 1419 aaKnown RBP24.97■■□□□ 1.59
PCDHA1-202ENST00000394633 CFAP74Q9C0B2 1584 aa24.96■■□□□ 1.59
PCDHA1-202ENST00000394633 FAM69CQ0P6D2 419 aa24.96■■□□□ 1.59
PCDHA1-202ENST00000394633 SPAG9O60271 1321 aaKnown RBP24.96■■□□□ 1.59
PCDHA1-202ENST00000394633 UHRF1BP1Q6BDS2 1440 aa24.95■■□□□ 1.59
PCDHA1-202ENST00000394633 RALGAPBQ86X10 1494 aa24.95■■□□□ 1.58
PCDHA1-202ENST00000394633 POLR3GLQ9BT43 218 aa24.94■■□□□ 1.58
PCDHA1-202ENST00000394633 INO80Q9ULG1 1556 aaPredicted RBP24.94■■□□□ 1.58
PCDHA1-202ENST00000394633 ARID4BQ4LE39 1312 aaPredicted RBP24.94■■□□□ 1.58
PCDHA1-202ENST00000394633 ATP7AQ04656 1500 aa24.92■■□□□ 1.58
PCDHA1-202ENST00000394633 CNGB1Q14028 1251 aaPredicted RBP24.92■■□□□ 1.58
PCDHA1-202ENST00000394633 TSPOAP1O95153 1857 aa24.91■■□□□ 1.58
PCDHA1-202ENST00000394633 KDM5DQ9BY66 1539 aa24.9■■□□□ 1.58
PCDHA1-202ENST00000394633 DUOX2Q9NRD8 1548 aa24.9■■□□□ 1.58
PCDHA1-202ENST00000394633 RTEL1-TNFRSF6BF6WH68 1400 aa24.9■■□□□ 1.58
PCDHA1-202ENST00000394633 ZNF518AQ6AHZ1 1483 aa24.9■■□□□ 1.58
PCDHA1-202ENST00000394633 NEO1Q92859 1461 aa24.9■■□□□ 1.58
PCDHA1-202ENST00000394633 POGZQ7Z3K3 1410 aa24.89■■□□□ 1.58
PCDHA1-202ENST00000394633 NUDCQ9Y266 331 aa24.88■■□□□ 1.57
PCDHA1-202ENST00000394633 NUP155O75694 1391 aa24.88■■□□□ 1.57
PCDHA1-202ENST00000394633 KIF13AQ9H1H9 1805 aa24.88■■□□□ 1.57
PCDHA1-202ENST00000394633 PPRC1Q5VV67 1664 aaKnown RBP24.88■■□□□ 1.57
PCDHA1-202ENST00000394633 KIDINS220Q9ULH0 1771 aa24.87■■□□□ 1.57
PCDHA1-202ENST00000394633 ROCK2O75116 1388 aaKnown RBP24.87■■□□□ 1.57
PCDHA1-202ENST00000394633 RNF123Q5XPI4 1314 aa24.86■■□□□ 1.57
PCDHA1-202ENST00000394633 RAPGEF3O95398 923 aa24.84■■□□□ 1.57
PCDHA1-202ENST00000394633 ERBINQ96RT1 1412 aa24.84■■□□□ 1.57
PCDHA1-202ENST00000394633 UNC13BO14795 1591 aa24.83■■□□□ 1.57
PCDHA1-202ENST00000394633 PNISRQ8TF01 805 aaKnown RBP24.83■■□□□ 1.57
PCDHA1-202ENST00000394633 MYT1LQ9UL68 1186 aa24.83■■□□□ 1.57
PCDHA1-202ENST00000394633 E9PCH4 1651 aa24.83■■□□□ 1.57
PCDHA1-202ENST00000394633 ERICH6Q7L0X2 663 aa24.82■■□□□ 1.56
PCDHA1-202ENST00000394633 CARD11Q9BXL7 1154 aa24.82■■□□□ 1.56
PCDHA1-202ENST00000394633 RICTORQ6R327 1708 aa24.8■■□□□ 1.56
PCDHA1-202ENST00000394633 FAM135AQ9P2D6 1515 aa24.8■■□□□ 1.56
PCDHA1-202ENST00000394633 HECW2Q9P2P5 1572 aa24.79■■□□□ 1.56
PCDHA1-202ENST00000394633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.78■■□□□ 1.56
PCDHA1-202ENST00000394633 TMC1Q8TDI8 760 aa24.77■■□□□ 1.56
PCDHA1-202ENST00000394633 MAGI2Q86UL8 1455 aa24.76■■□□□ 1.55
PCDHA1-202ENST00000394633 FRMPD1Q5SYB0 1578 aa24.76■■□□□ 1.55
PCDHA1-202ENST00000394633 ST20-MTHFSA0A0A6YYL1 179 aa24.76■■□□□ 1.55
PCDHA1-202ENST00000394633 BCL11AQ9H165 835 aa24.76■■□□□ 1.55
PCDHA1-202ENST00000394633 MLH3Q9UHC1 1453 aa24.75■■□□□ 1.55
PCDHA1-202ENST00000394633 KDM2AQ9Y2K7 1162 aa24.75■■□□□ 1.55
PCDHA1-202ENST00000394633 LRPPRCP42704 1394 aaKnown RBP24.75■■□□□ 1.55
PCDHA1-202ENST00000394633 SENP3-EIF4A1A0A087X0R7 540 aa24.74■■□□□ 1.55
PCDHA1-202ENST00000394633 ABCA6Q8N139 1617 aa24.74■■□□□ 1.55
PCDHA1-202ENST00000394633 IQGAP3Q86VI3 1631 aa24.73■■□□□ 1.55
PCDHA1-202ENST00000394633 DCAF11Q8TEB1 546 aa24.72■■□□□ 1.55
PCDHA1-202ENST00000394633 BRD4O60885 1362 aaPredicted RBP24.71■■□□□ 1.55
PCDHA1-202ENST00000394633 TRPM1Q7Z4N2 1603 aa24.71■■□□□ 1.55
PCDHA1-202ENST00000394633 KTN1Q86UP2 1357 aaKnown RBP24.7■■□□□ 1.55
PCDHA1-202ENST00000394633 DEPDC5O75140 1603 aa24.7■■□□□ 1.54
PCDHA1-202ENST00000394633 MYBBP1AQ9BQG0 1328 aaKnown RBP24.7■■□□□ 1.54
PCDHA1-202ENST00000394633 CCDC136Q96JN2 1154 aa24.69■■□□□ 1.54
PCDHA1-202ENST00000394633 A2MP01023 1474 aa24.68■■□□□ 1.54
PCDHA1-202ENST00000394633 KIF3BO15066 747 aa24.67■■□□□ 1.54
PCDHA1-202ENST00000394633 RALBP1Q15311 655 aa24.67■■□□□ 1.54
PCDHA1-202ENST00000394633 YEATS2Q9ULM3 1422 aa24.67■■□□□ 1.54
PCDHA1-202ENST00000394633 MROH1Q8NDA8 1641 aa24.67■■□□□ 1.54
PCDHA1-202ENST00000394633 EIF2AK4Q9P2K8 1649 aaKnown RBP24.67■■□□□ 1.54
PCDHA1-202ENST00000394633 DIP2CQ9Y2E4 1556 aa24.66■■□□□ 1.54
PCDHA1-202ENST00000394633 COL17A1Q9UMD9 1497 aaPredicted RBP24.64■■□□□ 1.53
PCDHA1-202ENST00000394633 DNAJC5Q9H3Z4 198 aa24.63■■□□□ 1.53
PCDHA1-202ENST00000394633 PRAG1Q86YV5 1406 aa24.63■■□□□ 1.53
PCDHA1-202ENST00000394633 PRDM15P57071 1507 aaPredicted RBP24.62■■□□□ 1.53
PCDHA1-202ENST00000394633 ZMYM4Q5VZL5 1548 aa24.61■■□□□ 1.53
PCDHA1-202ENST00000394633 VWDEQ8N2E2 1590 aa24.6■■□□□ 1.53
PCDHA1-202ENST00000394633 PLA2R1Q13018 1463 aa24.59■■□□□ 1.53
PCDHA1-202ENST00000394633 PARD3Q8TEW0 1356 aa24.59■■□□□ 1.53
PCDHA1-202ENST00000394633 CCDC144AA2RUR9 1427 aa24.58■■□□□ 1.53
PCDHA1-202ENST00000394633 NOP58Q9Y2X3 529 aaKnown RBP24.58■■□□□ 1.52
PCDHA1-202ENST00000394633 RNF17Q9BXT8 1623 aaKnown RBP24.57■■□□□ 1.52
PCDHA1-202ENST00000394633 LAMC1P11047 1609 aa24.57■■□□□ 1.52
PCDHA1-202ENST00000394633 RRP1P56182 461 aaKnown RBP24.54■■□□□ 1.52
PCDHA1-202ENST00000394633 NLRP13Q86W25 1043 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms