RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 RBM19Q9Y4C8 960 aaKnown RBP11.06□□□□□ -0.64
GAPVD1-207ENST00000394105 ZC3H13Q5T200 1668 aaKnown RBP11.06□□□□□ -0.64
GAPVD1-207ENST00000394105 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
GAPVD1-207ENST00000394105 CHMP7Q8WUX9 453 aaPredicted RBP11.05□□□□□ -0.64
GAPVD1-207ENST00000394105 HNRNPMP52272 730 aaKnown RBP eCLIP11.05□□□□□ -0.646e-13■■■■■ 43.1
GAPVD1-207ENST00000394105 PPRC1Q5VV67 1664 aaKnown RBP11.04□□□□□ -0.64
GAPVD1-207ENST00000394105 CCER2I3L3R5 266 aa11.04□□□□□ -0.64
GAPVD1-207ENST00000394105 FKBP8Q14318 412 aa11.04□□□□□ -0.64
GAPVD1-207ENST00000394105 ANP32EQ9BTT0 268 aa11.03□□□□□ -0.64
GAPVD1-207ENST00000394105 GPRASP1Q5JY77 1395 aa11.02□□□□□ -0.64
GAPVD1-207ENST00000394105 KIF15Q9NS87 1388 aa11.02□□□□□ -0.64
GAPVD1-207ENST00000394105 PRKRIP1Q9H875 184 aaPredicted RBP11.02□□□□□ -0.65
GAPVD1-207ENST00000394105 CARMIL2Q6F5E8 1435 aa11.02□□□□□ -0.65
GAPVD1-207ENST00000394105 ARAP3Q8WWN8 1544 aa11.02□□□□□ -0.65
GAPVD1-207ENST00000394105 PLCH2O75038 1416 aa11.01□□□□□ -0.65
GAPVD1-207ENST00000394105 PER1O15534 1290 aaPredicted RBP11.01□□□□□ -0.65
GAPVD1-207ENST00000394105 TESK2Q96S53 571 aa11.01□□□□□ -0.65
GAPVD1-207ENST00000394105 CFDP1Q9UEE9 299 aaPredicted RBP11□□□□□ -0.65
GAPVD1-207ENST00000394105 ZNF518AQ6AHZ1 1483 aa11□□□□□ -0.65
GAPVD1-207ENST00000394105 MYO5BQ9ULV0 1848 aa11□□□□□ -0.65
GAPVD1-207ENST00000394105 WDR7Q9Y4E6 1490 aa10.99□□□□□ -0.65
GAPVD1-207ENST00000394105 PTPRTO14522 1441 aa10.99□□□□□ -0.65
GAPVD1-207ENST00000394105 PKD2Q13563 968 aa10.99□□□□□ -0.65
GAPVD1-207ENST00000394105 ABCA6Q8N139 1617 aa10.99□□□□□ -0.65
GAPVD1-207ENST00000394105 LRPPRCP42704 1394 aaKnown RBP10.98□□□□□ -0.65
GAPVD1-207ENST00000394105 TRPM2O94759 1503 aa10.98□□□□□ -0.65
GAPVD1-207ENST00000394105 TET3O43151 1660 aa10.98□□□□□ -0.65
GAPVD1-207ENST00000394105 NBPF1Q3BBV0 1214 aa10.97□□□□□ -0.65
GAPVD1-207ENST00000394105 ARHGAP5Q13017 1502 aa10.97□□□□□ -0.65
GAPVD1-207ENST00000394105 USP47Q96K76 1375 aa10.97□□□□□ -0.65
GAPVD1-207ENST00000394105 PIK3C2BO00750 1634 aa10.97□□□□□ -0.65
GAPVD1-207ENST00000394105 MYO3AQ8NEV4 1616 aa10.96□□□□□ -0.65
GAPVD1-207ENST00000394105 DISP3Q9P2K9 1392 aa10.96□□□□□ -0.65
GAPVD1-207ENST00000394105 PPLO60437 1756 aa10.96□□□□□ -0.65
GAPVD1-207ENST00000394105 DUOX2Q9NRD8 1548 aa10.96□□□□□ -0.65
GAPVD1-207ENST00000394105 NEURL4Q96JN8 1562 aa10.96□□□□□ -0.65
GAPVD1-207ENST00000394105 RICTORQ6R327 1708 aa10.96□□□□□ -0.65
GAPVD1-207ENST00000394105 IRX6P78412 446 aaPredicted RBP10.96□□□□□ -0.66
GAPVD1-207ENST00000394105 FBLN2P98095 1184 aa10.96□□□□□ -0.66
GAPVD1-207ENST00000394105 RNF123Q5XPI4 1314 aa10.96□□□□□ -0.66
GAPVD1-207ENST00000394105 COL17A1Q9UMD9 1497 aaPredicted RBP10.95□□□□□ -0.66
GAPVD1-207ENST00000394105 SHPRHQ149N8 1683 aa10.95□□□□□ -0.66
GAPVD1-207ENST00000394105 KIAA1210Q9ULL0 1709 aa10.95□□□□□ -0.66
GAPVD1-207ENST00000394105 NRXN1Q9ULB1 1477 aa10.95□□□□□ -0.66
GAPVD1-207ENST00000394105 SLC4A1APQ9BWU0 796 aaKnown RBP10.95□□□□□ -0.66
GAPVD1-207ENST00000394105 ANKRD30AQ9BXX3 1397 aa10.94□□□□□ -0.66
GAPVD1-207ENST00000394105 EIF2AK4Q9P2K8 1649 aaKnown RBP10.94□□□□□ -0.66
GAPVD1-207ENST00000394105 NUP155O75694 1391 aa10.94□□□□□ -0.66
GAPVD1-207ENST00000394105 CFAP65Q6ZU64 1925 aaKnown RBP10.93□□□□□ -0.66
GAPVD1-207ENST00000394105 ERBINQ96RT1 1412 aa10.93□□□□□ -0.66
GAPVD1-207ENST00000394105 ADGRB1O14514 1584 aa10.92□□□□□ -0.66
GAPVD1-207ENST00000394105 SYNMO15061 1565 aa10.91□□□□□ -0.66
GAPVD1-207ENST00000394105 SETD1AO15047 1707 aaKnown RBP10.91□□□□□ -0.66
GAPVD1-207ENST00000394105 ATP7AQ04656 1500 aa10.91□□□□□ -0.66
GAPVD1-207ENST00000394105 EFCAB6Q5THR3 1501 aa10.91□□□□□ -0.66
GAPVD1-207ENST00000394105 BCL11AQ9H165 835 aa10.91□□□□□ -0.66
GAPVD1-207ENST00000394105 MAP3K4Q9Y6R4 1608 aa10.9□□□□□ -0.66
GAPVD1-207ENST00000394105 PARD3Q8TEW0 1356 aa10.89□□□□□ -0.67
GAPVD1-207ENST00000394105 ZNF777Q9ULD5 760 aaPredicted RBP10.89□□□□□ -0.67
GAPVD1-207ENST00000394105 ASXL1Q8IXJ9 1541 aa10.89□□□□□ -0.67
GAPVD1-207ENST00000394105 EIF4G2P78344 907 aaKnown RBP eCLIP10.88□□□□□ -0.67
GAPVD1-207ENST00000394105 PNISRQ8TF01 805 aaKnown RBP10.88□□□□□ -0.67
GAPVD1-207ENST00000394105 ST20-MTHFSA0A0A6YYL1 179 aa10.87□□□□□ -0.67
GAPVD1-207ENST00000394105 ADGRB3O60242 1522 aa10.87□□□□□ -0.67
GAPVD1-207ENST00000394105 LMTK2Q8IWU2 1503 aa10.87□□□□□ -0.67
GAPVD1-207ENST00000394105 HECW2Q9P2P5 1572 aa10.87□□□□□ -0.67
GAPVD1-207ENST00000394105 AFAP1Q8N556 730 aa10.86□□□□□ -0.67
GAPVD1-207ENST00000394105 ARHGEF28Q8N1W1 1705 aaKnown RBP10.86□□□□□ -0.67
GAPVD1-207ENST00000394105 RTEL1-TNFRSF6BF6WH68 1400 aa10.86□□□□□ -0.67
GAPVD1-207ENST00000394105 SENP3-EIF4A1A0A087X0R7 540 aa10.85□□□□□ -0.67
GAPVD1-207ENST00000394105 PLEKHD1A6NEE1 506 aa10.85□□□□□ -0.67
GAPVD1-207ENST00000394105 PAK3O75914 559 aaPredicted RBP10.84□□□□□ -0.67
GAPVD1-207ENST00000394105 KIF1BO60333 1816 aa10.84□□□□□ -0.67
GAPVD1-207ENST00000394105 DIP2CQ9Y2E4 1556 aa10.83□□□□□ -0.68
GAPVD1-207ENST00000394105 ASXL2Q76L83 1435 aa10.83□□□□□ -0.68
GAPVD1-207ENST00000394105 FANCAO15360 1455 aa10.83□□□□□ -0.68
GAPVD1-207ENST00000394105 ERVK-7P63135 1459 aa10.82□□□□□ -0.68
GAPVD1-207ENST00000394105 CAMSAP1Q5T5Y3 1602 aa10.82□□□□□ -0.68
GAPVD1-207ENST00000394105 BLMP54132 1417 aaPredicted RBP10.81□□□□□ -0.68
GAPVD1-207ENST00000394105 ZBED9Q6R2W3 1325 aa10.8□□□□□ -0.68
GAPVD1-207ENST00000394105 NEXMIFQ5QGS0 1516 aa10.79□□□□□ -0.68
GAPVD1-207ENST00000394105 SMG6Q86US8 1419 aaKnown RBP10.79□□□□□ -0.68
GAPVD1-207ENST00000394105 QRICH2Q9H0J4 1663 aa10.79□□□□□ -0.68
GAPVD1-207ENST00000394105 FANCIQ9NVI1 1328 aa10.79□□□□□ -0.68
GAPVD1-207ENST00000394105 CDK11AQ9UQ88 783 aaPredicted RBP10.79□□□□□ -0.68
GAPVD1-207ENST00000394105 NPATQ14207 1427 aa10.78□□□□□ -0.68
GAPVD1-207ENST00000394105 KIF13AQ9H1H9 1805 aa10.78□□□□□ -0.68
GAPVD1-207ENST00000394105 SCAPERQ9BY12 1400 aa10.78□□□□□ -0.68
GAPVD1-207ENST00000394105 NRXN3Q9Y4C0 1643 aa10.78□□□□□ -0.68
GAPVD1-207ENST00000394105 ANP32CO43423 234 aa10.78□□□□□ -0.68
GAPVD1-207ENST00000394105 DCAF11Q8TEB1 546 aa10.78□□□□□ -0.68
GAPVD1-207ENST00000394105 TMEM131LA2VDJ0 1609 aa10.77□□□□□ -0.68
GAPVD1-207ENST00000394105 MYOM2P54296 1465 aa10.77□□□□□ -0.68
GAPVD1-207ENST00000394105 MYT1Q01538 1121 aa10.77□□□□□ -0.69
GAPVD1-207ENST00000394105 ABCC3O15438 1527 aa10.77□□□□□ -0.69
GAPVD1-207ENST00000394105 ZNF521Q96K83 1311 aa10.76□□□□□ -0.69
GAPVD1-207ENST00000394105 B4GALNT3Q6L9W6 998 aa10.76□□□□□ -0.69
GAPVD1-207ENST00000394105 CCDC144AA2RUR9 1427 aa10.76□□□□□ -0.69
GAPVD1-207ENST00000394105 SETBP1Q9Y6X0 1596 aa10.76□□□□□ -0.69
GAPVD1-207ENST00000394105 SKAP1Q86WV1 359 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms