RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 WASHC2AQ641Q2 1341 aa10.02□□□□□ -0.81
SMAD1-202ENST00000394092 UHRF1BP1Q6BDS2 1440 aa10.02□□□□□ -0.81
SMAD1-202ENST00000394092 HNRNPMP52272 730 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMAD1-202ENST00000394092 DUOX2Q9NRD8 1548 aa10.02□□□□□ -0.81
SMAD1-202ENST00000394092 CCDC7Q96M83 1385 aa10.02□□□□□ -0.81
SMAD1-202ENST00000394092 RALGAPBQ86X10 1494 aa10.01□□□□□ -0.81
SMAD1-202ENST00000394092 SPATA31E1Q6ZUB1 1445 aa10.01□□□□□ -0.81
SMAD1-202ENST00000394092 ABCC1P33527 1531 aa10.01□□□□□ -0.81
SMAD1-202ENST00000394092 NPM3O75607 178 aaKnown RBP10.01□□□□□ -0.81
SMAD1-202ENST00000394092 KDM5CP41229 1560 aa10.01□□□□□ -0.81
SMAD1-202ENST00000394092 ERBINQ96RT1 1412 aa10□□□□□ -0.81
SMAD1-202ENST00000394092 PLCH2O75038 1416 aa10□□□□□ -0.81
SMAD1-202ENST00000394092 NBPF8Q3BBV2 869 aa9.99□□□□□ -0.81
SMAD1-202ENST00000394092 MAGI2Q86UL8 1455 aa9.99□□□□□ -0.81
SMAD1-202ENST00000394092 KCNH8Q96L42 1107 aa9.99□□□□□ -0.81
SMAD1-202ENST00000394092 ARID4BQ4LE39 1312 aaPredicted RBP9.98□□□□□ -0.81
SMAD1-202ENST00000394092 USP47Q96K76 1375 aa9.97□□□□□ -0.81
SMAD1-202ENST00000394092 CCDC144AA2RUR9 1427 aa9.96□□□□□ -0.81
SMAD1-202ENST00000394092 EFCAB2Q5VUJ9 269 aa9.96□□□□□ -0.81
SMAD1-202ENST00000394092 EIF2AK4Q9P2K8 1649 aaKnown RBP9.96□□□□□ -0.81
SMAD1-202ENST00000394092 SUPT16HQ9Y5B9 1047 aaKnown RBP9.96□□□□□ -0.82
SMAD1-202ENST00000394092 LAMC1P11047 1609 aa9.96□□□□□ -0.82
SMAD1-202ENST00000394092 ROCK2O75116 1388 aaKnown RBP9.95□□□□□ -0.82
SMAD1-202ENST00000394092 ABCA9Q8IUA7 1624 aa9.95□□□□□ -0.82
SMAD1-202ENST00000394092 WDR7Q9Y4E6 1490 aa9.95□□□□□ -0.82
SMAD1-202ENST00000394092 BCORL1Q5H9F3 1711 aa9.95□□□□□ -0.82
SMAD1-202ENST00000394092 KIF7Q2M1P5 1343 aa9.95□□□□□ -0.82
SMAD1-202ENST00000394092 TRPM1Q7Z4N2 1603 aa9.94□□□□□ -0.82
SMAD1-202ENST00000394092 RTEL1-TNFRSF6BF6WH68 1400 aa9.94□□□□□ -0.82
SMAD1-202ENST00000394092 ATP10AO60312 1499 aa9.94□□□□□ -0.82
SMAD1-202ENST00000394092 ZFYVE16Q7Z3T8 1539 aa9.93□□□□□ -0.82
SMAD1-202ENST00000394092 NEFLP07196 543 aa9.93□□□□□ -0.82
SMAD1-202ENST00000394092 DEPDC5O75140 1603 aa9.92□□□□□ -0.82
SMAD1-202ENST00000394092 ABCB7O75027 752 aa9.92□□□□□ -0.82
SMAD1-202ENST00000394092 ZNF326Q5BKZ1 582 aaKnown RBP9.92□□□□□ -0.82
SMAD1-202ENST00000394092 INO80Q9ULG1 1556 aaPredicted RBP9.91□□□□□ -0.82
SMAD1-202ENST00000394092 TRHP20396 242 aaPredicted RBP9.91□□□□□ -0.82
SMAD1-202ENST00000394092 PRKRIP1Q9H875 184 aaPredicted RBP9.91□□□□□ -0.82
SMAD1-202ENST00000394092 E9PCH4 1651 aa9.91□□□□□ -0.82
SMAD1-202ENST00000394092 CARD11Q9BXL7 1154 aa9.9□□□□□ -0.82
SMAD1-202ENST00000394092 CFAP74Q9C0B2 1584 aa9.9□□□□□ -0.82
SMAD1-202ENST00000394092 SPHKAPQ2M3C7 1700 aa9.9□□□□□ -0.82
SMAD1-202ENST00000394092 CEP152O94986 1710 aa9.9□□□□□ -0.83
SMAD1-202ENST00000394092 TET3O43151 1660 aa9.9□□□□□ -0.83
SMAD1-202ENST00000394092 ATP7AQ04656 1500 aa9.9□□□□□ -0.83
SMAD1-202ENST00000394092 PRAG1Q86YV5 1406 aa9.9□□□□□ -0.83
SMAD1-202ENST00000394092 C11orf95C9JLR9 678 aaPredicted RBP9.9□□□□□ -0.83
SMAD1-202ENST00000394092 FANCAO15360 1455 aa9.89□□□□□ -0.83
SMAD1-202ENST00000394092 TRAPPC8Q9Y2L5 1435 aa9.89□□□□□ -0.83
SMAD1-202ENST00000394092 SPAG9O60271 1321 aaKnown RBP9.89□□□□□ -0.83
SMAD1-202ENST00000394092 DCAF11Q8TEB1 546 aa9.89□□□□□ -0.83
SMAD1-202ENST00000394092 RNF17Q9BXT8 1623 aaKnown RBP9.88□□□□□ -0.83
SMAD1-202ENST00000394092 HNRNPUQ00839 825 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMAD1-202ENST00000394092 TRPM2O94759 1503 aa9.88□□□□□ -0.83
SMAD1-202ENST00000394092 PRDM15P57071 1507 aaPredicted RBP9.88□□□□□ -0.83
SMAD1-202ENST00000394092 A2MP01023 1474 aa9.88□□□□□ -0.83
SMAD1-202ENST00000394092 PLA2R1Q13018 1463 aa9.88□□□□□ -0.83
SMAD1-202ENST00000394092 KTN1Q86UP2 1357 aaKnown RBP9.87□□□□□ -0.83
SMAD1-202ENST00000394092 ZNF219Q9P2Y4 722 aaPredicted RBP9.87□□□□□ -0.83
SMAD1-202ENST00000394092 GPRASP1Q5JY77 1395 aa9.87□□□□□ -0.83
SMAD1-202ENST00000394092 ADGRL1O94910 1474 aa9.86□□□□□ -0.83
SMAD1-202ENST00000394092 DHX29Q7Z478 1369 aaKnown RBP9.86□□□□□ -0.83
SMAD1-202ENST00000394092 MRS2Q9HD23 443 aa9.86□□□□□ -0.83
SMAD1-202ENST00000394092 KANK1Q14678 1352 aa9.85□□□□□ -0.83
SMAD1-202ENST00000394092 NEURL4Q96JN8 1562 aa9.85□□□□□ -0.83
SMAD1-202ENST00000394092 KDM2AQ9Y2K7 1162 aa9.85□□□□□ -0.83
SMAD1-202ENST00000394092 ASXL2Q76L83 1435 aa9.85□□□□□ -0.83
SMAD1-202ENST00000394092 VWDEQ8N2E2 1590 aa9.85□□□□□ -0.83
SMAD1-202ENST00000394092 MADDQ8WXG6 1647 aa9.84□□□□□ -0.83
SMAD1-202ENST00000394092 FKBP8Q14318 412 aa9.83□□□□□ -0.84
SMAD1-202ENST00000394092 STAC3Q96MF2 364 aa9.83□□□□□ -0.84
SMAD1-202ENST00000394092 RBM42Q9BTD8 480 aaKnown RBP9.83□□□□□ -0.84
SMAD1-202ENST00000394092 ZBED9Q6R2W3 1325 aa9.83□□□□□ -0.84
SMAD1-202ENST00000394092 KIAA1210Q9ULL0 1709 aa9.83□□□□□ -0.84
SMAD1-202ENST00000394092 CHRDL2Q6WN34 429 aa9.83□□□□□ -0.84
SMAD1-202ENST00000394092 ZNF518AQ6AHZ1 1483 aa9.82□□□□□ -0.84
SMAD1-202ENST00000394092 COL17A1Q9UMD9 1497 aaPredicted RBP9.82□□□□□ -0.84
SMAD1-202ENST00000394092 POLR3GLQ9BT43 218 aa9.82□□□□□ -0.84
SMAD1-202ENST00000394092 CLTCL1P53675 1640 aa9.82□□□□□ -0.84
SMAD1-202ENST00000394092 KIF1BO60333 1816 aa9.82□□□□□ -0.84
SMAD1-202ENST00000394092 IQGAP1P46940 1657 aa9.82□□□□□ -0.84
SMAD1-202ENST00000394092 KIDINS220Q9ULH0 1771 aa9.81□□□□□ -0.84
SMAD1-202ENST00000394092 PTPRTO14522 1441 aa9.81□□□□□ -0.84
SMAD1-202ENST00000394092 SCAPERQ9BY12 1400 aa9.81□□□□□ -0.84
SMAD1-202ENST00000394092 ST20-MTHFSA0A0A6YYL1 179 aa9.81□□□□□ -0.84
SMAD1-202ENST00000394092 NPM1P06748 294 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMAD1-202ENST00000394092 FAM9BQ8IZU0 186 aa9.8□□□□□ -0.84
SMAD1-202ENST00000394092 MROH1Q8NDA8 1641 aa9.8□□□□□ -0.84
SMAD1-202ENST00000394092 RGL3Q3MIN7 710 aa9.8□□□□□ -0.84
SMAD1-202ENST00000394092 EFCAB6Q5THR3 1501 aa9.79□□□□□ -0.84
SMAD1-202ENST00000394092 RALBP1Q15311 655 aa9.79□□□□□ -0.84
SMAD1-202ENST00000394092 ERICH6BQ5W0A0 696 aa9.79□□□□□ -0.84
SMAD1-202ENST00000394092 OSCARQ8IYS5 282 aa9.79□□□□□ -0.84
SMAD1-202ENST00000394092 AFAP1Q8N556 730 aa9.79□□□□□ -0.84
SMAD1-202ENST00000394092 LMTK2Q8IWU2 1503 aa9.79□□□□□ -0.84
SMAD1-202ENST00000394092 HECW2Q9P2P5 1572 aa9.79□□□□□ -0.84
SMAD1-202ENST00000394092 BRD4O60885 1362 aaPredicted RBP9.78□□□□□ -0.84
SMAD1-202ENST00000394092 CCDC184Q52MB2 194 aa9.78□□□□□ -0.84
SMAD1-202ENST00000394092 IFT172Q9UG01 1749 aa9.77□□□□□ -0.84
SMAD1-202ENST00000394092 MYBBP1AQ9BQG0 1328 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms