RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 RALBP1Q15311 655 aa21.75■■□□□ 1.07
CNP-201ENST00000393888 CRBNQ96SW2 442 aa21.75■■□□□ 1.07
CNP-201ENST00000393888 WASHC2CQ9Y4E1 1318 aa21.74■■□□□ 1.07
CNP-201ENST00000393888 KIAA0586Q9BVV6 1533 aa21.74■■□□□ 1.07
CNP-201ENST00000393888 CFDP1Q9UEE9 299 aaPredicted RBP21.72■■□□□ 1.07
CNP-201ENST00000393888 DCAF11Q8TEB1 546 aa21.71■■□□□ 1.07
CNP-201ENST00000393888 JPH4Q96JJ6 628 aa21.7■■□□□ 1.06
CNP-201ENST00000393888 RALGAPBQ86X10 1494 aa21.69■■□□□ 1.06
CNP-201ENST00000393888 GSE1Q14687 1217 aa21.68■■□□□ 1.06
CNP-201ENST00000393888 NFKBIBQ15653 356 aa21.68■■□□□ 1.06
CNP-201ENST00000393888 C20orf194Q5TEA3 1177 aa21.68■■□□□ 1.06
CNP-201ENST00000393888 NLRP13Q86W25 1043 aa21.68■■□□□ 1.06
CNP-201ENST00000393888 CAMSAP2Q08AD1 1489 aa21.67■■□□□ 1.06
CNP-201ENST00000393888 DNAJC5Q9H3Z4 198 aa21.67■■□□□ 1.06
CNP-201ENST00000393888 CC2D1BQ5T0F9 858 aaKnown RBP21.67■■□□□ 1.06
CNP-201ENST00000393888 PDE3BQ13370 1112 aa21.66■■□□□ 1.06
CNP-201ENST00000393888 PRG4Q92954 1404 aaPredicted RBP21.66■■□□□ 1.06
CNP-201ENST00000393888 DDRGK1Q96HY6 314 aa21.66■■□□□ 1.06
CNP-201ENST00000393888 NUP155O75694 1391 aa21.64■■□□□ 1.06
CNP-201ENST00000393888 UHRF1BP1Q6BDS2 1440 aa21.64■■□□□ 1.06
CNP-201ENST00000393888 NUP153P49790 1475 aaKnown RBP21.64■■□□□ 1.05
CNP-201ENST00000393888 KTN1Q86UP2 1357 aaKnown RBP21.64■■□□□ 1.05
CNP-201ENST00000393888 FRAT1Q92837 279 aaPredicted RBP21.64■■□□□ 1.05
CNP-201ENST00000393888 OSCARQ8IYS5 282 aa21.61■■□□□ 1.05
CNP-201ENST00000393888 DAXXQ9UER7 740 aaPredicted RBP21.6■■□□□ 1.05
CNP-201ENST00000393888 PARD3Q8TEW0 1356 aa21.6■■□□□ 1.05
CNP-201ENST00000393888 ANKRD50Q9ULJ7 1429 aa21.6■■□□□ 1.05
CNP-201ENST00000393888 DISP1Q96F81 1524 aa21.6■■□□□ 1.05
CNP-201ENST00000393888 E9PCH4 1651 aa21.59■■□□□ 1.05
CNP-201ENST00000393888 ADGBQ8N7X0 1667 aa21.59■■□□□ 1.05
CNP-201ENST00000393888 ANKRD30AQ9BXX3 1397 aa21.58■■□□□ 1.05
CNP-201ENST00000393888 PER1O15534 1290 aaPredicted RBP21.57■■□□□ 1.04
CNP-201ENST00000393888 NBPF1Q3BBV0 1214 aa21.56■■□□□ 1.04
CNP-201ENST00000393888 GPATCH8Q9UKJ3 1502 aaKnown RBP21.55■■□□□ 1.04
CNP-201ENST00000393888 RGL3Q3MIN7 710 aa21.55■■□□□ 1.04
CNP-201ENST00000393888 CLASP1Q7Z460 1538 aa21.55■■□□□ 1.04
CNP-201ENST00000393888 ERCC6L2Q5T890 1561 aa21.54■■□□□ 1.04
CNP-201ENST00000393888 KIAA0556O60303 1618 aa21.53■■□□□ 1.04
CNP-201ENST00000393888 RAPGEF6Q8TEU7 1601 aa21.53■■□□□ 1.04
CNP-201ENST00000393888 FRAT2O75474 233 aaPredicted RBP21.52■■□□□ 1.04
CNP-201ENST00000393888 KDM2BQ8NHM5 1336 aa21.52■■□□□ 1.04
CNP-201ENST00000393888 EIF5BO60841 1220 aaKnown RBP21.52■■□□□ 1.04
CNP-201ENST00000393888 RGS3P49796 1198 aa21.52■■□□□ 1.04
CNP-201ENST00000393888 ADGRL2O95490 1459 aa21.52■■□□□ 1.03
CNP-201ENST00000393888 TROQ12816 1431 aaPredicted RBP21.51■■□□□ 1.03
CNP-201ENST00000393888 PANK3Q9H999 370 aa21.51■■□□□ 1.03
CNP-201ENST00000393888 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
CNP-201ENST00000393888 C8orf34Q49A92 452 aa21.5■■□□□ 1.03
CNP-201ENST00000393888 ADAMTS8Q9UP79 889 aa21.49■■□□□ 1.03
CNP-201ENST00000393888 CROCC2H7BZ55 1655 aa21.49■■□□□ 1.03
CNP-201ENST00000393888 FAM161AQ3B820 660 aa21.48■■□□□ 1.03
CNP-201ENST00000393888 CARMIL2Q6F5E8 1435 aa21.48■■□□□ 1.03
CNP-201ENST00000393888 BLMP54132 1417 aaPredicted RBP21.47■■□□□ 1.03
CNP-201ENST00000393888 CENPQQ7L2Z9 268 aaPredicted RBP21.46■■□□□ 1.03
CNP-201ENST00000393888 DISP3Q9P2K9 1392 aa21.46■■□□□ 1.03
CNP-201ENST00000393888 ITSN2Q9NZM3 1697 aa21.46■■□□□ 1.03
CNP-201ENST00000393888 SHROOM2Q13796 1616 aa21.45■■□□□ 1.02
CNP-201ENST00000393888 PLB1Q6P1J6 1458 aa21.45■■□□□ 1.02
CNP-201ENST00000393888 C9orf84Q5VXU9 1444 aa21.43■■□□□ 1.02
CNP-201ENST00000393888 HNRNPMP52272 730 aaKnown RBP eCLIP21.42■■□□□ 1.02
CNP-201ENST00000393888 ZMYM4Q5VZL5 1548 aa21.42■■□□□ 1.02
CNP-201ENST00000393888 TSPY4P0CV99 314 aa21.42■■□□□ 1.02
CNP-201ENST00000393888 TSPY10P0CW01 314 aa21.42■■□□□ 1.02
CNP-201ENST00000393888 DUSP27Q5VZP5 1158 aa21.41■■□□□ 1.02
CNP-201ENST00000393888 PLEKHH1Q9ULM0 1364 aa21.41■■□□□ 1.02
CNP-201ENST00000393888 TESK2Q96S53 571 aa21.4■■□□□ 1.02
CNP-201ENST00000393888 PRAG1Q86YV5 1406 aa21.4■■□□□ 1.02
CNP-201ENST00000393888 KDM5DQ9BY66 1539 aa21.39■■□□□ 1.01
CNP-201ENST00000393888 TRPM1Q7Z4N2 1603 aa21.38■■□□□ 1.01
CNP-201ENST00000393888 PTPRGP23470 1445 aa21.38■■□□□ 1.01
CNP-201ENST00000393888 CDC42BPAQ5VT25 1732 aa21.35■■□□□ 1.01
CNP-201ENST00000393888 COL17A1Q9UMD9 1497 aaPredicted RBP21.35■■□□□ 1.01
CNP-201ENST00000393888 WDR43Q15061 677 aaKnown RBP eCLIP21.35■■□□□ 1.01
CNP-201ENST00000393888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.35■■□□□ 1.011e-6■□□□□ 11.2
CNP-201ENST00000393888 GOLGA2Q08379 1002 aa21.34■■□□□ 1.01
CNP-201ENST00000393888 CCDC146Q8IYE0 955 aa21.34■■□□□ 1.01
CNP-201ENST00000393888 CCDC144AA2RUR9 1427 aa21.33■■□□□ 1.01
CNP-201ENST00000393888 ERBINQ96RT1 1412 aa21.33■■□□□ 1
CNP-201ENST00000393888 PLEKHH2Q8IVE3 1493 aa21.32■■□□□ 1
CNP-201ENST00000393888 PLEKHD1A6NEE1 506 aa21.32■■□□□ 1
CNP-201ENST00000393888 TMF1P82094 1093 aa21.32■■□□□ 1
CNP-201ENST00000393888 BCAR3O75815 825 aa21.31■■□□□ 1
CNP-201ENST00000393888 PPP2R1AP30153 589 aa21.31■■□□□ 1
CNP-201ENST00000393888 POGKQ9P215 609 aa21.31■■□□□ 1
CNP-201ENST00000393888 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.31■■□□□ 1
CNP-201ENST00000393888 SPINK5Q9NQ38 1064 aaPredicted RBP21.31■■□□□ 1
CNP-201ENST00000393888 UBE2Q2Q8WVN8 375 aa21.3■■□□□ 1
CNP-201ENST00000393888 ADCY10Q96PN6 1610 aa21.3■■□□□ 1
CNP-201ENST00000393888 SEC24BO95487 1268 aa21.3■■□□□ 1
CNP-201ENST00000393888 INSRP06213 1382 aa21.29■■□□□ 1
CNP-201ENST00000393888 IGHDP01880 384 aa21.29■■□□□ 1
CNP-201ENST00000393888 FAM135AQ9P2D6 1515 aa21.28■■□□□ 1
CNP-201ENST00000393888 SLKQ9H2G2 1235 aaPredicted RBP21.28■■□□□ 1
CNP-201ENST00000393888 A2MP01023 1474 aa21.28■■□□□ 1
CNP-201ENST00000393888 ZNF521Q96K83 1311 aa21.27■■□□□ 1
CNP-201ENST00000393888 SLFN5Q08AF3 891 aa21.27■□□□□ 0.99
CNP-201ENST00000393888 KNSTRNQ9Y448 316 aa21.27■□□□□ 0.99
CNP-201ENST00000393888 USP19O94966 1318 aa21.26■□□□□ 0.99
CNP-201ENST00000393888 FAM43AQ8N2R8 423 aa21.26■□□□□ 0.99
CNP-201ENST00000393888 SHANK2Q9UPX8 1470 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms