RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 ANO8Q9HCE9 1232 aaPredicted RBP18.55■□□□□ 0.56
CCDC57-203ENST00000392343 NLRP13Q86W25 1043 aa18.55■□□□□ 0.56
CCDC57-203ENST00000392343 HNRNPMP52272 730 aaKnown RBP eCLIP18.53■□□□□ 0.561e-6■■■■□ 23.2
CCDC57-203ENST00000392343 CRBNQ96SW2 442 aa18.53■□□□□ 0.56
CCDC57-203ENST00000392343 KIAA0586Q9BVV6 1533 aa18.53■□□□□ 0.56
CCDC57-203ENST00000392343 UHRF1BP1Q6BDS2 1440 aa18.53■□□□□ 0.56
CCDC57-203ENST00000392343 SLC4A3P48751 1232 aa18.52■□□□□ 0.56
CCDC57-203ENST00000392343 KTN1Q86UP2 1357 aaKnown RBP18.52■□□□□ 0.55
CCDC57-203ENST00000392343 TSPY4P0CV99 314 aa18.51■□□□□ 0.55
CCDC57-203ENST00000392343 TSPY10P0CW01 314 aa18.51■□□□□ 0.55
CCDC57-203ENST00000392343 ADGBQ8N7X0 1667 aa18.5■□□□□ 0.55
CCDC57-203ENST00000392343 C20orf194Q5TEA3 1177 aa18.5■□□□□ 0.55
CCDC57-203ENST00000392343 ADGRL2O95490 1459 aa18.48■□□□□ 0.55
CCDC57-203ENST00000392343 PER1O15534 1290 aaPredicted RBP18.48■□□□□ 0.55
CCDC57-203ENST00000392343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.47■□□□□ 0.552e-9■■□□□ 14
CCDC57-203ENST00000392343 PLEKHD1A6NEE1 506 aa18.47■□□□□ 0.55
CCDC57-203ENST00000392343 PDE3BQ13370 1112 aa18.47■□□□□ 0.55
CCDC57-203ENST00000392343 C9orf84Q5VXU9 1444 aa18.46■□□□□ 0.55
CCDC57-203ENST00000392343 PARD3Q8TEW0 1356 aa18.46■□□□□ 0.55
CCDC57-203ENST00000392343 PANK3Q9H999 370 aa18.46■□□□□ 0.55
CCDC57-203ENST00000392343 MS4A1P11836 297 aa18.45■□□□□ 0.54
CCDC57-203ENST00000392343 CHMP7Q8WUX9 453 aaPredicted RBP18.45■□□□□ 0.54
CCDC57-203ENST00000392343 ITSN2Q9NZM3 1697 aa18.44■□□□□ 0.54
CCDC57-203ENST00000392343 CROCC2H7BZ55 1655 aa18.42■□□□□ 0.54
CCDC57-203ENST00000392343 GRIN2AQ12879 1464 aa18.41■□□□□ 0.54
CCDC57-203ENST00000392343 DISP3Q9P2K9 1392 aa18.41■□□□□ 0.54
CCDC57-203ENST00000392343 ARHGEF12Q9NZN5 1544 aa18.41■□□□□ 0.54
CCDC57-203ENST00000392343 ADAMTS8Q9UP79 889 aa18.4■□□□□ 0.54
CCDC57-203ENST00000392343 PPM1GO15355 546 aaPredicted RBP18.4■□□□□ 0.54
CCDC57-203ENST00000392343 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.53
CCDC57-203ENST00000392343 JPH4Q96JJ6 628 aa18.39■□□□□ 0.53
CCDC57-203ENST00000392343 E9PCH4 1651 aa18.39■□□□□ 0.53
CCDC57-203ENST00000392343 USP35Q9P2H5 1018 aa18.38■□□□□ 0.53
CCDC57-203ENST00000392343 TESK2Q96S53 571 aa18.36■□□□□ 0.53
CCDC57-203ENST00000392343 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.36■□□□□ 0.53
CCDC57-203ENST00000392343 BRPF3Q9ULD4 1205 aa18.36■□□□□ 0.53
CCDC57-203ENST00000392343 PRAG1Q86YV5 1406 aa18.36■□□□□ 0.53
CCDC57-203ENST00000392343 CEP170Q5SW79 1584 aa18.36■□□□□ 0.53
CCDC57-203ENST00000392343 CCDC144AA2RUR9 1427 aa18.36■□□□□ 0.53
CCDC57-203ENST00000392343 CDC42BPAQ5VT25 1732 aa18.35■□□□□ 0.53
CCDC57-203ENST00000392343 RGS3P49796 1198 aa18.35■□□□□ 0.53
CCDC57-203ENST00000392343 NFKBIBQ15653 356 aa18.35■□□□□ 0.53
CCDC57-203ENST00000392343 DAXXQ9UER7 740 aaPredicted RBP18.34■□□□□ 0.53
CCDC57-203ENST00000392343 DDRGK1Q96HY6 314 aa18.34■□□□□ 0.53
CCDC57-203ENST00000392343 IFT140Q96RY7 1462 aa18.33■□□□□ 0.53
CCDC57-203ENST00000392343 KDM5DQ9BY66 1539 aa18.33■□□□□ 0.52
CCDC57-203ENST00000392343 TMF1P82094 1093 aa18.31■□□□□ 0.52
CCDC57-203ENST00000392343 ADCY10Q96PN6 1610 aa18.31■□□□□ 0.52
CCDC57-203ENST00000392343 MAGI1Q96QZ7 1491 aaPredicted RBP18.3■□□□□ 0.52
CCDC57-203ENST00000392343 PRKCSHP14314 528 aaPredicted RBP18.3■□□□□ 0.52
CCDC57-203ENST00000392343 FAM135AQ9P2D6 1515 aa18.3■□□□□ 0.52
CCDC57-203ENST00000392343 BLMP54132 1417 aaPredicted RBP18.3■□□□□ 0.52
CCDC57-203ENST00000392343 PLEKHH1Q9ULM0 1364 aa18.3■□□□□ 0.52
CCDC57-203ENST00000392343 WASHC2CQ9Y4E1 1318 aa18.3■□□□□ 0.52
CCDC57-203ENST00000392343 GSE1Q14687 1217 aa18.3■□□□□ 0.52
CCDC57-203ENST00000392343 ATP10BO94823 1461 aa18.3■□□□□ 0.52
CCDC57-203ENST00000392343 TRPM1Q7Z4N2 1603 aa18.3■□□□□ 0.52
CCDC57-203ENST00000392343 KDM2BQ8NHM5 1336 aa18.29■□□□□ 0.52
CCDC57-203ENST00000392343 WDR43Q15061 677 aaKnown RBP eCLIP18.29■□□□□ 0.52
CCDC57-203ENST00000392343 CCDC146Q8IYE0 955 aa18.29■□□□□ 0.52
CCDC57-203ENST00000392343 ABCC10Q5T3U5 1492 aa18.29■□□□□ 0.52
CCDC57-203ENST00000392343 PTPRGP23470 1445 aa18.29■□□□□ 0.52
CCDC57-203ENST00000392343 CARMIL2Q6F5E8 1435 aa18.29■□□□□ 0.52
CCDC57-203ENST00000392343 DUSP27Q5VZP5 1158 aa18.28■□□□□ 0.52
CCDC57-203ENST00000392343 FRAT1Q92837 279 aaPredicted RBP18.28■□□□□ 0.52
CCDC57-203ENST00000392343 ERBINQ96RT1 1412 aa18.28■□□□□ 0.52
CCDC57-203ENST00000392343 A2MP01023 1474 aa18.27■□□□□ 0.52
CCDC57-203ENST00000392343 COL17A1Q9UMD9 1497 aaPredicted RBP18.27■□□□□ 0.52
CCDC57-203ENST00000392343 SHANK2Q9UPX8 1470 aa18.27■□□□□ 0.52
CCDC57-203ENST00000392343 EIF4G3O43432 1585 aaKnown RBP18.27■□□□□ 0.52
CCDC57-203ENST00000392343 C8orf34Q49A92 452 aa18.27■□□□□ 0.51
CCDC57-203ENST00000392343 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
CCDC57-203ENST00000392343 PPP2R1AP30153 589 aa18.26■□□□□ 0.51
CCDC57-203ENST00000392343 CENPQQ7L2Z9 268 aaPredicted RBP18.26■□□□□ 0.51
CCDC57-203ENST00000392343 KNSTRNQ9Y448 316 aa18.26■□□□□ 0.51
CCDC57-203ENST00000392343 FAM161AQ3B820 660 aa18.25■□□□□ 0.51
CCDC57-203ENST00000392343 ZMYM4Q5VZL5 1548 aa18.25■□□□□ 0.51
CCDC57-203ENST00000392343 FRAT2O75474 233 aaPredicted RBP18.24■□□□□ 0.51
CCDC57-203ENST00000392343 GOLGA2Q08379 1002 aa18.24■□□□□ 0.51
CCDC57-203ENST00000392343 SPINK5Q9NQ38 1064 aaPredicted RBP18.23■□□□□ 0.51
CCDC57-203ENST00000392343 ERCC6Q03468 1493 aa18.23■□□□□ 0.51
CCDC57-203ENST00000392343 BCAR3O75815 825 aa18.22■□□□□ 0.51
CCDC57-203ENST00000392343 GPRASP1Q5JY77 1395 aa18.22■□□□□ 0.51
CCDC57-203ENST00000392343 MAGI2Q86UL8 1455 aa18.19■□□□□ 0.5
CCDC57-203ENST00000392343 CCDC141Q6ZP82 1450 aa18.19■□□□□ 0.5
CCDC57-203ENST00000392343 ABCA8O94911 1581 aa18.18■□□□□ 0.5
CCDC57-203ENST00000392343 APAF1O14727 1248 aa18.18■□□□□ 0.5
CCDC57-203ENST00000392343 PRDM15P57071 1507 aaPredicted RBP18.18■□□□□ 0.5
CCDC57-203ENST00000392343 SYNJ2O15056 1496 aa18.17■□□□□ 0.5
CCDC57-203ENST00000392343 AMER1Q5JTC6 1135 aaPredicted RBP18.17■□□□□ 0.5
CCDC57-203ENST00000392343 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.17■□□□□ 0.5
CCDC57-203ENST00000392343 SLFN5Q08AF3 891 aa18.17■□□□□ 0.5
CCDC57-203ENST00000392343 PLEKHH2Q8IVE3 1493 aa18.17■□□□□ 0.5
CCDC57-203ENST00000392343 SAMD9LQ8IVG5 1584 aa18.17■□□□□ 0.5
CCDC57-203ENST00000392343 ZNF521Q96K83 1311 aa18.16■□□□□ 0.5
CCDC57-203ENST00000392343 IGHDP01880 384 aa18.16■□□□□ 0.5
CCDC57-203ENST00000392343 DMRT2Q9Y5R5 561 aa18.16■□□□□ 0.5
CCDC57-203ENST00000392343 SLC24A1O60721 1099 aa18.15■□□□□ 0.5
CCDC57-203ENST00000392343 SYCP2Q9BX26 1530 aa18.13■□□□□ 0.49
CCDC57-203ENST00000392343 WDR7Q9Y4E6 1490 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms