RNA–Protein interactions for RNA: ENST00000387416.2

MT-TS1-201, Transcript of mitochondrially encoded tRNA serine 1 (UCN), humanhuman

BASIC

Gene MT-TS1, Length 69 nt, Biotype Mt tRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-TS1-201ENST00000387416 DMRT2Q9Y5R5 561 aa13.06□□□□□ -0.32
MT-TS1-201ENST00000387416 KIF15Q9NS87 1388 aa13.06□□□□□ -0.32
MT-TS1-201ENST00000387416 EIF2AK4Q9P2K8 1649 aaKnown RBP13.05□□□□□ -0.32
MT-TS1-201ENST00000387416 CLTCQ00610 1675 aaKnown RBP13.05□□□□□ -0.32
MT-TS1-201ENST00000387416 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
MT-TS1-201ENST00000387416 HSPA2P54652 639 aa13.04□□□□□ -0.32
MT-TS1-201ENST00000387416 RRP7BPQ9NSQ0 103 aa13.04□□□□□ -0.32
MT-TS1-201ENST00000387416 CROCC2H7BZ55 1655 aa13.04□□□□□ -0.32
MT-TS1-201ENST00000387416 KDM5DQ9BY66 1539 aa13.03□□□□□ -0.32
MT-TS1-201ENST00000387416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.03□□□□□ -0.32
MT-TS1-201ENST00000387416 PTPRKQ15262 1439 aa13.03□□□□□ -0.32
MT-TS1-201ENST00000387416 NCOA1Q15788 1441 aa13.03□□□□□ -0.32
MT-TS1-201ENST00000387416 RNF17Q9BXT8 1623 aaKnown RBP13.02□□□□□ -0.32
MT-TS1-201ENST00000387416 CHIC2Q9UKJ5 165 aa13.02□□□□□ -0.33
MT-TS1-201ENST00000387416 ADGRL2O95490 1459 aa13.01□□□□□ -0.33
MT-TS1-201ENST00000387416 PZPP20742 1482 aa13□□□□□ -0.33
MT-TS1-201ENST00000387416 KANK1Q14678 1352 aa13□□□□□ -0.33
MT-TS1-201ENST00000387416 ZC3H13Q5T200 1668 aaKnown RBP12.99□□□□□ -0.33
MT-TS1-201ENST00000387416 TNRQ92752 1358 aa12.98□□□□□ -0.33
MT-TS1-201ENST00000387416 ROCK1Q13464 1354 aa12.97□□□□□ -0.33
MT-TS1-201ENST00000387416 ABCC3O15438 1527 aa12.97□□□□□ -0.33
MT-TS1-201ENST00000387416 FBXO31Q5XUX0 539 aaPredicted RBP12.96□□□□□ -0.33
MT-TS1-201ENST00000387416 PKD2Q13563 968 aa12.95□□□□□ -0.34
MT-TS1-201ENST00000387416 PPARGC1BQ86YN6 1023 aaKnown RBP12.95□□□□□ -0.34
MT-TS1-201ENST00000387416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.34
MT-TS1-201ENST00000387416 A2ML1A8K2U0 1454 aa12.95□□□□□ -0.34
MT-TS1-201ENST00000387416 NLRP1Q9C000 1473 aa12.95□□□□□ -0.34
MT-TS1-201ENST00000387416 PTPRTO14522 1441 aa12.95□□□□□ -0.34
MT-TS1-201ENST00000387416 ARHGAP31Q2M1Z3 1444 aa12.95□□□□□ -0.34
MT-TS1-201ENST00000387416 ANKRD50Q9ULJ7 1429 aa12.95□□□□□ -0.34
MT-TS1-201ENST00000387416 PRDM15P57071 1507 aaPredicted RBP12.94□□□□□ -0.34
MT-TS1-201ENST00000387416 ZNF142P52746 1687 aaPredicted RBP12.94□□□□□ -0.34
MT-TS1-201ENST00000387416 THEMISQ8N1K5 641 aaPredicted RBP12.94□□□□□ -0.34
MT-TS1-201ENST00000387416 MROH1Q8NDA8 1641 aa12.94□□□□□ -0.34
MT-TS1-201ENST00000387416 PLA2R1Q13018 1463 aa12.93□□□□□ -0.34
MT-TS1-201ENST00000387416 DEPDC5O75140 1603 aa12.93□□□□□ -0.34
MT-TS1-201ENST00000387416 MYO3AQ8NEV4 1616 aa12.93□□□□□ -0.34
MT-TS1-201ENST00000387416 CEP170BQ9Y4F5 1589 aaPredicted RBP12.93□□□□□ -0.34
MT-TS1-201ENST00000387416 RRBP1Q9P2E9 1410 aaKnown RBP12.92□□□□□ -0.34
MT-TS1-201ENST00000387416 STRCQ7RTU9 1775 aa12.92□□□□□ -0.34
MT-TS1-201ENST00000387416 LMTK2Q8IWU2 1503 aa12.91□□□□□ -0.34
MT-TS1-201ENST00000387416 CAMSAP1Q5T5Y3 1602 aa12.91□□□□□ -0.34
MT-TS1-201ENST00000387416 SPATA31D1Q6ZQQ2 1576 aa12.9□□□□□ -0.34
MT-TS1-201ENST00000387416 ERVK-7P63135 1459 aa12.9□□□□□ -0.34
MT-TS1-201ENST00000387416 CEP152O94986 1710 aa12.89□□□□□ -0.35
MT-TS1-201ENST00000387416 ITGAEP38570 1179 aa12.89□□□□□ -0.35
MT-TS1-201ENST00000387416 ANKLE2Q86XL3 938 aa12.89□□□□□ -0.35
MT-TS1-201ENST00000387416 VWDEQ8N2E2 1590 aa12.89□□□□□ -0.35
MT-TS1-201ENST00000387416 CFAP65Q6ZU64 1925 aaKnown RBP12.88□□□□□ -0.35
MT-TS1-201ENST00000387416 NCKAP5LQ9HCH0 1330 aa12.87□□□□□ -0.35
MT-TS1-201ENST00000387416 UGGT1Q9NYU2 1555 aa12.86□□□□□ -0.35
MT-TS1-201ENST00000387416 RPRD2Q5VT52 1461 aaKnown RBP12.86□□□□□ -0.35
MT-TS1-201ENST00000387416 FBXO41Q8TF61 875 aa12.86□□□□□ -0.35
MT-TS1-201ENST00000387416 SLC52A1Q9NWF4 448 aa12.86□□□□□ -0.35
MT-TS1-201ENST00000387416 CERKQ8TCT0 537 aa12.85□□□□□ -0.35
MT-TS1-201ENST00000387416 UNC13BO14795 1591 aa12.83□□□□□ -0.36
MT-TS1-201ENST00000387416 ILDR1Q86SU0 546 aaPredicted RBP12.83□□□□□ -0.36
MT-TS1-201ENST00000387416 STAG3Q9UJ98 1225 aa12.83□□□□□ -0.36
MT-TS1-201ENST00000387416 EFCAB6Q5THR3 1501 aa12.83□□□□□ -0.36
MT-TS1-201ENST00000387416 NUP155O75694 1391 aa12.82□□□□□ -0.36
MT-TS1-201ENST00000387416 NOS1P29475 1434 aa12.82□□□□□ -0.36
MT-TS1-201ENST00000387416 TET3O43151 1660 aa12.82□□□□□ -0.36
MT-TS1-201ENST00000387416 ACIN1Q9UKV3 1341 aaKnown RBP12.82□□□□□ -0.36
MT-TS1-201ENST00000387416 EID1Q9Y6B2 187 aa12.81□□□□□ -0.36
MT-TS1-201ENST00000387416 MED14O60244 1454 aa12.8□□□□□ -0.36
MT-TS1-201ENST00000387416 IDI1Q13907 227 aa12.8□□□□□ -0.36
MT-TS1-201ENST00000387416 KDM5AP29375 1690 aaKnown RBP12.8□□□□□ -0.36
MT-TS1-201ENST00000387416 GCC2Q8IWJ2 1684 aa12.8□□□□□ -0.36
MT-TS1-201ENST00000387416 HDGFP51858 240 aaKnown RBP12.79□□□□□ -0.36
MT-TS1-201ENST00000387416 IQGAP3Q86VI3 1631 aa12.79□□□□□ -0.36
MT-TS1-201ENST00000387416 POLR1AO95602 1720 aaPredicted RBP12.79□□□□□ -0.36
MT-TS1-201ENST00000387416 TXNDC2Q86VQ3 553 aa12.78□□□□□ -0.36
MT-TS1-201ENST00000387416 UBR1Q8IWV7 1749 aa12.78□□□□□ -0.36
MT-TS1-201ENST00000387416 HFM1A2PYH4 1435 aa12.78□□□□□ -0.36
MT-TS1-201ENST00000387416 NPHP4O75161 1426 aaPredicted RBP12.78□□□□□ -0.36
MT-TS1-201ENST00000387416 NAIPQ13075 1403 aa12.78□□□□□ -0.36
MT-TS1-201ENST00000387416 IQSEC2Q5JU85 1478 aa12.78□□□□□ -0.36
MT-TS1-201ENST00000387416 SLIT1O75093 1534 aa12.78□□□□□ -0.36
MT-TS1-201ENST00000387416 TMEM2Q9UHN6 1383 aa12.77□□□□□ -0.37
MT-TS1-201ENST00000387416 ARHGAP23Q9P227 1491 aa12.77□□□□□ -0.37
MT-TS1-201ENST00000387416 SCAF11Q99590 1463 aaKnown RBP12.76□□□□□ -0.37
MT-TS1-201ENST00000387416 LTBP4Q8N2S1 1624 aa12.76□□□□□ -0.37
MT-TS1-201ENST00000387416 PIK3C2BO00750 1634 aa12.75□□□□□ -0.37
MT-TS1-201ENST00000387416 SYNMO15061 1565 aa12.75□□□□□ -0.37
MT-TS1-201ENST00000387416 NEURL4Q96JN8 1562 aa12.75□□□□□ -0.37
MT-TS1-201ENST00000387416 ZNF335Q9H4Z2 1342 aaPredicted RBP12.74□□□□□ -0.37
MT-TS1-201ENST00000387416 LTKP29376 864 aa12.73□□□□□ -0.37
MT-TS1-201ENST00000387416 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.73□□□□□ -0.37
MT-TS1-201ENST00000387416 TRIM52Q96A61 297 aa12.73□□□□□ -0.37
MT-TS1-201ENST00000387416 E9PCH4 1651 aa12.73□□□□□ -0.37
MT-TS1-201ENST00000387416 IQGAP1P46940 1657 aa12.72□□□□□ -0.37
MT-TS1-201ENST00000387416 ADGRB3O60242 1522 aa12.72□□□□□ -0.37
MT-TS1-201ENST00000387416 CPS1P31327 1500 aa12.72□□□□□ -0.37
MT-TS1-201ENST00000387416 CHGAP10645 457 aaKnown RBP12.69□□□□□ -0.38
MT-TS1-201ENST00000387416 SLC4A1APQ9BWU0 796 aaKnown RBP12.69□□□□□ -0.38
MT-TS1-201ENST00000387416 PPP1R15AO75807 674 aaPredicted RBP12.68□□□□□ -0.38
MT-TS1-201ENST00000387416 TMEM131LA2VDJ0 1609 aa12.67□□□□□ -0.38
MT-TS1-201ENST00000387416 RIMS2Q9UQ26 1411 aa12.67□□□□□ -0.38
MT-TS1-201ENST00000387416 ZFYVE9O95405 1425 aa12.66□□□□□ -0.38
MT-TS1-201ENST00000387416 BCANQ96GW7 911 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms