RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 NAP1L5Q96NT1 182 aaPredicted RBP24.48■■□□□ 1.51
CSPG5-202ENST00000383738 U2AF1L5P0DN76 240 aaPredicted RBP24.47■■□□□ 1.51
CSPG5-202ENST00000383738 U2AF1Q01081 240 aaKnown RBP eCLIP24.47■■□□□ 1.51
CSPG5-202ENST00000383738 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.46■■□□□ 1.51
CSPG5-202ENST00000383738 NUDCQ9Y266 331 aa24.46■■□□□ 1.51
CSPG5-202ENST00000383738 SPRYD3Q8NCJ5 442 aa24.46■■□□□ 1.51
CSPG5-202ENST00000383738 DDRGK1Q96HY6 314 aa24.45■■□□□ 1.5
CSPG5-202ENST00000383738 HSP90AA1P07900 732 aaKnown RBP24.44■■□□□ 1.5
CSPG5-202ENST00000383738 KTN1Q86UP2 1357 aaKnown RBP24.44■■□□□ 1.5
CSPG5-202ENST00000383738 C9orf84Q5VXU9 1444 aa24.43■■□□□ 1.5
CSPG5-202ENST00000383738 UPF2Q9HAU5 1272 aaKnown RBP24.4■■□□□ 1.5
CSPG5-202ENST00000383738 PRKRIP1Q9H875 184 aaPredicted RBP24.4■■□□□ 1.5
CSPG5-202ENST00000383738 RRP7AQ9Y3A4 280 aaKnown RBP24.4■■□□□ 1.5
CSPG5-202ENST00000383738 EID1Q9Y6B2 187 aa24.4■■□□□ 1.5
CSPG5-202ENST00000383738 CCDC184Q52MB2 194 aa24.39■■□□□ 1.5
CSPG5-202ENST00000383738 VGFO15240 615 aaPredicted RBP24.39■■□□□ 1.49
CSPG5-202ENST00000383738 HDGFL2Q7Z4V5 671 aaPredicted RBP24.39■■□□□ 1.49
CSPG5-202ENST00000383738 ERICH6BQ5W0A0 696 aa24.38■■□□□ 1.49
CSPG5-202ENST00000383738 NAIPQ13075 1403 aa24.38■■□□□ 1.49
CSPG5-202ENST00000383738 KIF7Q2M1P5 1343 aa24.37■■□□□ 1.49
CSPG5-202ENST00000383738 LTV1Q96GA3 475 aaPredicted RBP24.37■■□□□ 1.49
CSPG5-202ENST00000383738 MAGI1Q96QZ7 1491 aaPredicted RBP24.37■■□□□ 1.49
CSPG5-202ENST00000383738 WASHC2AQ641Q2 1341 aa24.36■■□□□ 1.49
CSPG5-202ENST00000383738 SLKQ9H2G2 1235 aaPredicted RBP24.36■■□□□ 1.49
CSPG5-202ENST00000383738 PLIN1O60240 522 aa24.35■■□□□ 1.49
CSPG5-202ENST00000383738 NGDNQ8NEJ9 315 aaKnown RBP24.35■■□□□ 1.49
CSPG5-202ENST00000383738 DAPK1P53355 1430 aa24.35■■□□□ 1.49
CSPG5-202ENST00000383738 GZF1Q9H116 711 aaPredicted RBP24.34■■□□□ 1.49
CSPG5-202ENST00000383738 EHBP1L1Q8N3D4 1523 aa24.34■■□□□ 1.49
CSPG5-202ENST00000383738 HFM1A2PYH4 1435 aa24.32■■□□□ 1.48
CSPG5-202ENST00000383738 EXOC6Q8TAG9 804 aa24.32■■□□□ 1.48
CSPG5-202ENST00000383738 BRPF3Q9ULD4 1205 aa24.32■■□□□ 1.48
CSPG5-202ENST00000383738 CUL7Q14999 1698 aa24.3■■□□□ 1.48
CSPG5-202ENST00000383738 KIF21AQ7Z4S6 1674 aa24.3■■□□□ 1.48
CSPG5-202ENST00000383738 HECW1Q76N89 1606 aa24.3■■□□□ 1.48
CSPG5-202ENST00000383738 MIA2Q96PC5 1412 aa24.3■■□□□ 1.48
CSPG5-202ENST00000383738 CABP2Q9NPB3 220 aa24.29■■□□□ 1.48
CSPG5-202ENST00000383738 FTSJ3Q8IY81 847 aaKnown RBP24.29■■□□□ 1.48
CSPG5-202ENST00000383738 PDE4AP27815 886 aa24.28■■□□□ 1.48
CSPG5-202ENST00000383738 RCAN3Q9UKA8 241 aa24.28■■□□□ 1.48
CSPG5-202ENST00000383738 NLRP13Q86W25 1043 aa24.28■■□□□ 1.48
CSPG5-202ENST00000383738 RALBP1Q15311 655 aa24.26■■□□□ 1.47
CSPG5-202ENST00000383738 THOC2Q8NI27 1593 aaKnown RBP24.26■■□□□ 1.47
CSPG5-202ENST00000383738 ABCC5O15440 1437 aa24.26■■□□□ 1.47
CSPG5-202ENST00000383738 PTPRKQ15262 1439 aa24.25■■□□□ 1.47
CSPG5-202ENST00000383738 TERF2IPQ9NYB0 399 aa24.24■■□□□ 1.47
CSPG5-202ENST00000383738 ARID3AQ99856 593 aa24.22■■□□□ 1.47
CSPG5-202ENST00000383738 SLC26A8Q96RN1 970 aa24.22■■□□□ 1.47
CSPG5-202ENST00000383738 NUTM2GQ5VZR2 741 aa24.21■■□□□ 1.47
CSPG5-202ENST00000383738 CLUAP1Q96AJ1 413 aa24.21■■□□□ 1.47
CSPG5-202ENST00000383738 EIF3AQ14152 1382 aaKnown RBP24.21■■□□□ 1.47
CSPG5-202ENST00000383738 FBXO31Q5XUX0 539 aaPredicted RBP24.21■■□□□ 1.47
CSPG5-202ENST00000383738 ANP32BQ92688 251 aaKnown RBP24.21■■□□□ 1.47
CSPG5-202ENST00000383738 ELL2O00472 640 aaPredicted RBP24.2■■□□□ 1.46
CSPG5-202ENST00000383738 GGNBP2Q9H3C7 697 aa24.2■■□□□ 1.46
CSPG5-202ENST00000383738 CCDC7Q96M83 1385 aa24.2■■□□□ 1.46
CSPG5-202ENST00000383738 C11orf95C9JLR9 678 aaPredicted RBP24.2■■□□□ 1.46
CSPG5-202ENST00000383738 CEBPAP49715 358 aaPredicted RBP24.2■■□□□ 1.46
CSPG5-202ENST00000383738 TRIM44Q96DX7 344 aaPredicted RBP24.2■■□□□ 1.46
CSPG5-202ENST00000383738 SUPT6HQ7KZ85 1726 aaKnown RBP24.19■■□□□ 1.46
CSPG5-202ENST00000383738 TCERG1O14776 1098 aaKnown RBP24.19■■□□□ 1.46
CSPG5-202ENST00000383738 BCL2L13Q9BXK5 485 aa24.19■■□□□ 1.46
CSPG5-202ENST00000383738 CD109Q6YHK3 1445 aa24.18■■□□□ 1.46
CSPG5-202ENST00000383738 BECN1Q14457 450 aa24.18■■□□□ 1.46
CSPG5-202ENST00000383738 CENPJQ9HC77 1338 aaPredicted RBP24.18■■□□□ 1.46
CSPG5-202ENST00000383738 SLC12A5Q9H2X9 1139 aa24.17■■□□□ 1.46
CSPG5-202ENST00000383738 ATP10BO94823 1461 aa24.17■■□□□ 1.46
CSPG5-202ENST00000383738 GSE1Q14687 1217 aa24.17■■□□□ 1.46
CSPG5-202ENST00000383738 TXNDC2Q86VQ3 553 aa24.17■■□□□ 1.46
CSPG5-202ENST00000383738 SKAP1Q86WV1 359 aa24.16■■□□□ 1.46
CSPG5-202ENST00000383738 KIAA1107Q9UPP5 1409 aa24.16■■□□□ 1.46
CSPG5-202ENST00000383738 CAMSAP2Q08AD1 1489 aa24.16■■□□□ 1.46
CSPG5-202ENST00000383738 WDR97A6NE52 1622 aa24.15■■□□□ 1.46
CSPG5-202ENST00000383738 APAF1O14727 1248 aa24.14■■□□□ 1.46
CSPG5-202ENST00000383738 CSB-PGBD3P0DP91 1061 aa24.14■■□□□ 1.45
CSPG5-202ENST00000383738 RBM33Q96EV2 1170 aaKnown RBP24.14■■□□□ 1.45
CSPG5-202ENST00000383738 EVC2Q86UK5 1308 aa24.14■■□□□ 1.45
CSPG5-202ENST00000383738 ZBED9Q6R2W3 1325 aa24.13■■□□□ 1.45
CSPG5-202ENST00000383738 TPRNQ4KMQ1 711 aa24.13■■□□□ 1.45
CSPG5-202ENST00000383738 NUP153P49790 1475 aaKnown RBP24.13■■□□□ 1.45
CSPG5-202ENST00000383738 NCOA1Q15788 1441 aa24.12■■□□□ 1.45
CSPG5-202ENST00000383738 APBB1O00213 710 aa24.11■■□□□ 1.45
CSPG5-202ENST00000383738 AMPHP49418 695 aa24.11■■□□□ 1.45
CSPG5-202ENST00000383738 PRAM1Q96QH2 718 aa24.1■■□□□ 1.45
CSPG5-202ENST00000383738 MYH16Q9H6N6 1097 aa24.1■■□□□ 1.45
CSPG5-202ENST00000383738 MYBBP1AQ9BQG0 1328 aaKnown RBP24.1■■□□□ 1.45
CSPG5-202ENST00000383738 NCLP19338 710 aaKnown RBP24.09■■□□□ 1.45
CSPG5-202ENST00000383738 AKNAQ7Z591 1439 aa24.09■■□□□ 1.45
CSPG5-202ENST00000383738 PTPN23Q9H3S7 1636 aa24.08■■□□□ 1.45
CSPG5-202ENST00000383738 VSIG10Q8N0Z9 540 aa24.08■■□□□ 1.44
CSPG5-202ENST00000383738 PLEKHH2Q8IVE3 1493 aa24.08■■□□□ 1.44
CSPG5-202ENST00000383738 PMFBP1Q8TBY8 1022 aa24.07■■□□□ 1.44
CSPG5-202ENST00000383738 GPATCH8Q9UKJ3 1502 aaKnown RBP24.07■■□□□ 1.44
CSPG5-202ENST00000383738 RTF1Q92541 710 aaKnown RBP24.06■■□□□ 1.44
CSPG5-202ENST00000383738 ZNF330Q9Y3S2 320 aaPredicted RBP24.06■■□□□ 1.44
CSPG5-202ENST00000383738 GOLGA2Q08379 1002 aa24.03■■□□□ 1.44
CSPG5-202ENST00000383738 NFKBIBQ15653 356 aa24.03■■□□□ 1.44
CSPG5-202ENST00000383738 ANKRD30BQ9BXX2 1392 aa24.02■■□□□ 1.44
CSPG5-202ENST00000383738 CCDC141Q6ZP82 1450 aa24.02■■□□□ 1.44
CSPG5-202ENST00000383738 ADGRL1O94910 1474 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms