RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 HECW2Q9P2P5 1572 aa7.37□□□□□ -1.23
GEN1-202ENST00000381254 UHRF1BP1LA0JNW5 1464 aa7.36□□□□□ -1.23
GEN1-202ENST00000381254 UPF2Q9HAU5 1272 aaKnown RBP7.36□□□□□ -1.23
GEN1-202ENST00000381254 POLD1P28340 1107 aa7.35□□□□□ -1.23
GEN1-202ENST00000381254 CHMP4BQ9H444 224 aaKnown RBP7.35□□□□□ -1.23
GEN1-202ENST00000381254 TARBP1Q13395 1621 aaKnown RBP7.35□□□□□ -1.23
GEN1-202ENST00000381254 TRPC5Q9UL62 973 aaPredicted RBP7.35□□□□□ -1.23
GEN1-202ENST00000381254 QTRT2Q9H974 415 aaKnown RBP7.34□□□□□ -1.23
GEN1-202ENST00000381254 MAGI2Q86UL8 1455 aa7.34□□□□□ -1.23
GEN1-202ENST00000381254 NGDNQ8NEJ9 315 aaKnown RBP7.34□□□□□ -1.23
GEN1-202ENST00000381254 CCDC125Q86Z20 511 aa7.34□□□□□ -1.24
GEN1-202ENST00000381254 ZNF518AQ6AHZ1 1483 aa7.34□□□□□ -1.24
GEN1-202ENST00000381254 CFAP44Q96MT7 982 aa7.33□□□□□ -1.24
GEN1-202ENST00000381254 RRP7BPQ9NSQ0 103 aa7.33□□□□□ -1.24
GEN1-202ENST00000381254 CCER2I3L3R5 266 aa7.33□□□□□ -1.24
GEN1-202ENST00000381254 ANP32BQ92688 251 aaKnown RBP7.33□□□□□ -1.24
GEN1-202ENST00000381254 FHOD3Q2V2M9 1422 aa7.33□□□□□ -1.24
GEN1-202ENST00000381254 ATAD2Q6PL18 1390 aa7.33□□□□□ -1.24
GEN1-202ENST00000381254 C11orf95C9JLR9 678 aaPredicted RBP7.33□□□□□ -1.24
GEN1-202ENST00000381254 MAGI3Q5TCQ9 1506 aa7.33□□□□□ -1.24
GEN1-202ENST00000381254 ZNF335Q9H4Z2 1342 aaPredicted RBP7.32□□□□□ -1.24
GEN1-202ENST00000381254 RBM6P78332 1123 aaKnown RBP7.32□□□□□ -1.24
GEN1-202ENST00000381254 USP21Q9UK80 565 aa7.32□□□□□ -1.24
GEN1-202ENST00000381254 SPATA31D1Q6ZQQ2 1576 aa7.32□□□□□ -1.24
GEN1-202ENST00000381254 DDRGK1Q96HY6 314 aa7.31□□□□□ -1.24
GEN1-202ENST00000381254 EIF4G2P78344 907 aaKnown RBP eCLIP7.31□□□□□ -1.24
GEN1-202ENST00000381254 GLIPR1L2Q4G1C9 344 aa7.31□□□□□ -1.24
GEN1-202ENST00000381254 ESCO1Q5FWF5 840 aa7.31□□□□□ -1.24
GEN1-202ENST00000381254 BCL11BQ9C0K0 894 aaPredicted RBP7.31□□□□□ -1.24
GEN1-202ENST00000381254 ZMYM3Q14202 1370 aa7.31□□□□□ -1.24
GEN1-202ENST00000381254 SENP3-EIF4A1A0A087X0R7 540 aa7.31□□□□□ -1.24
GEN1-202ENST00000381254 WASHC2AQ641Q2 1341 aa7.31□□□□□ -1.24
GEN1-202ENST00000381254 ANKRD30AQ9BXX3 1397 aa7.31□□□□□ -1.24
GEN1-202ENST00000381254 MS4A1P11836 297 aa7.3□□□□□ -1.24
GEN1-202ENST00000381254 GPRASP1Q5JY77 1395 aa7.3□□□□□ -1.24
GEN1-202ENST00000381254 VPS8Q8N3P4 1428 aa7.3□□□□□ -1.24
GEN1-202ENST00000381254 GPR162Q16538 588 aa7.3□□□□□ -1.24
GEN1-202ENST00000381254 PTPRTO14522 1441 aa7.3□□□□□ -1.24
GEN1-202ENST00000381254 YY1P25490 414 aa7.3□□□□□ -1.24
GEN1-202ENST00000381254 PCF11O94913 1555 aaKnown RBP7.3□□□□□ -1.24
GEN1-202ENST00000381254 SLC52A1Q9NWF4 448 aa7.29□□□□□ -1.24
GEN1-202ENST00000381254 VGFO15240 615 aaPredicted RBP7.29□□□□□ -1.24
GEN1-202ENST00000381254 SPATA31A6Q5VVP1 1343 aa7.29□□□□□ -1.24
GEN1-202ENST00000381254 SRPK2P78362 688 aaKnown RBP7.29□□□□□ -1.24
GEN1-202ENST00000381254 DIP2BQ9P265 1576 aa7.29□□□□□ -1.24
GEN1-202ENST00000381254 JCADQ9P266 1359 aa7.28□□□□□ -1.24
GEN1-202ENST00000381254 PPARGC1BQ86YN6 1023 aaKnown RBP7.28□□□□□ -1.24
GEN1-202ENST00000381254 SLC26A8Q96RN1 970 aa7.28□□□□□ -1.24
GEN1-202ENST00000381254 STK32BQ9NY57 414 aa7.28□□□□□ -1.24
GEN1-202ENST00000381254 STK26Q9P289 416 aa7.28□□□□□ -1.24
GEN1-202ENST00000381254 GLI2P10070 1586 aa7.27□□□□□ -1.25
GEN1-202ENST00000381254 PPM1GO15355 546 aaPredicted RBP7.27□□□□□ -1.25
GEN1-202ENST00000381254 POLR3GLQ9BT43 218 aa7.27□□□□□ -1.25
GEN1-202ENST00000381254 FYCO1Q9BQS8 1478 aa7.27□□□□□ -1.25
GEN1-202ENST00000381254 C19orf44Q9H6X5 657 aa7.26□□□□□ -1.25
GEN1-202ENST00000381254 SLAIN2Q9P270 581 aa7.26□□□□□ -1.25
GEN1-202ENST00000381254 NPHP4O75161 1426 aaPredicted RBP7.26□□□□□ -1.25
GEN1-202ENST00000381254 KCNA6P17658 529 aa7.26□□□□□ -1.25
GEN1-202ENST00000381254 NGEFQ8N5V2 710 aa7.26□□□□□ -1.25
GEN1-202ENST00000381254 STAC3Q96MF2 364 aa7.26□□□□□ -1.25
GEN1-202ENST00000381254 CANXP27824 592 aaKnown RBP7.26□□□□□ -1.25
GEN1-202ENST00000381254 CHMP4AQ9BY43 222 aa7.25□□□□□ -1.25
GEN1-202ENST00000381254 KIF14Q15058 1648 aa7.25□□□□□ -1.25
GEN1-202ENST00000381254 BEGAINQ9BUH8 593 aa7.25□□□□□ -1.25
GEN1-202ENST00000381254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.25□□□□□ -1.25
GEN1-202ENST00000381254 PLCH2O75038 1416 aa7.25□□□□□ -1.25
GEN1-202ENST00000381254 RPRD2Q5VT52 1461 aaKnown RBP7.25□□□□□ -1.25
GEN1-202ENST00000381254 ARXQ96QS3 562 aa7.24□□□□□ -1.25
GEN1-202ENST00000381254 STRN4Q9NRL3 753 aa7.24□□□□□ -1.25
GEN1-202ENST00000381254 TROQ12816 1431 aaPredicted RBP7.24□□□□□ -1.25
GEN1-202ENST00000381254 AIDAQ96BJ3 306 aa7.24□□□□□ -1.25
GEN1-202ENST00000381254 ABCA5Q8WWZ7 1642 aa7.24□□□□□ -1.25
GEN1-202ENST00000381254 BECN1Q14457 450 aa7.24□□□□□ -1.25
GEN1-202ENST00000381254 KIAA0556O60303 1618 aa7.24□□□□□ -1.25
GEN1-202ENST00000381254 KDM5BQ9UGL1 1544 aa7.23□□□□□ -1.25
GEN1-202ENST00000381254 PRDM11Q9NQV5 511 aa7.23□□□□□ -1.25
GEN1-202ENST00000381254 ROCK2O75116 1388 aaKnown RBP7.23□□□□□ -1.25
GEN1-202ENST00000381254 NPHP3Q7Z494 1330 aa7.23□□□□□ -1.25
GEN1-202ENST00000381254 HECW1Q76N89 1606 aa7.23□□□□□ -1.25
GEN1-202ENST00000381254 TMC1Q8TDI8 760 aa7.23□□□□□ -1.25
GEN1-202ENST00000381254 EIF3AQ14152 1382 aaKnown RBP7.23□□□□□ -1.25
GEN1-202ENST00000381254 ABCA8O94911 1581 aa7.22□□□□□ -1.25
GEN1-202ENST00000381254 PNNQ9H307 717 aaKnown RBP7.22□□□□□ -1.25
GEN1-202ENST00000381254 RIMS1Q86UR5 1692 aaKnown RBP7.22□□□□□ -1.25
GEN1-202ENST00000381254 AFF2P51816 1311 aa7.22□□□□□ -1.25
GEN1-202ENST00000381254 NUTM2FA1L443 756 aa7.22□□□□□ -1.25
GEN1-202ENST00000381254 LRRC9Q6ZRR7 1453 aa7.21□□□□□ -1.25
GEN1-202ENST00000381254 ARAP3Q8WWN8 1544 aa7.21□□□□□ -1.25
GEN1-202ENST00000381254 PTMSP20962 102 aa7.21□□□□□ -1.26
GEN1-202ENST00000381254 UGGT2Q9NYU1 1516 aa7.21□□□□□ -1.26
GEN1-202ENST00000381254 ILDR2Q71H61 639 aa7.21□□□□□ -1.26
GEN1-202ENST00000381254 SPON1Q9HCB6 807 aa7.21□□□□□ -1.26
GEN1-202ENST00000381254 HNRNPUQ00839 825 aaKnown RBP eCLIP7.2□□□□□ -1.26
GEN1-202ENST00000381254 NPATQ14207 1427 aa7.2□□□□□ -1.26
GEN1-202ENST00000381254 CCDC136Q96JN2 1154 aa7.2□□□□□ -1.26
GEN1-202ENST00000381254 CFAP53Q96M91 514 aa7.2□□□□□ -1.26
GEN1-202ENST00000381254 RUSC2Q8N2Y8 1516 aa7.2□□□□□ -1.26
GEN1-202ENST00000381254 RGL3Q3MIN7 710 aa7.2□□□□□ -1.26
GEN1-202ENST00000381254 PAXIP1Q6ZW49 1069 aaPredicted RBP7.2□□□□□ -1.26
GEN1-202ENST00000381254 WDR43Q15061 677 aaKnown RBP eCLIP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms