RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 FOXD1Q16676 465 aa21.15■□□□□ 0.98
COL4A3BP-203ENST00000380494 PODXL2Q9NZ53 605 aa21.15■□□□□ 0.98
COL4A3BP-203ENST00000380494 TRIM6-TRIM34B2RNG4 842 aa21.14■□□□□ 0.97
COL4A3BP-203ENST00000380494 E9PSI1 815 aa21.13■□□□□ 0.97
COL4A3BP-203ENST00000380494 CRBNQ96SW2 442 aa21.13■□□□□ 0.97
COL4A3BP-203ENST00000380494 TPM3P06753 285 aa21.13■□□□□ 0.97
COL4A3BP-203ENST00000380494 HSP90B1P14625 803 aaKnown RBP21.12■□□□□ 0.97
COL4A3BP-203ENST00000380494 LMOD3Q0VAK6 560 aa21.12■□□□□ 0.97
COL4A3BP-203ENST00000380494 TEX35Q5T0J7 233 aa21.12■□□□□ 0.97
COL4A3BP-203ENST00000380494 NUP155O75694 1391 aa21.11■□□□□ 0.97
COL4A3BP-203ENST00000380494 CHMP4CQ96CF2 233 aa21.11■□□□□ 0.97
COL4A3BP-203ENST00000380494 TPM2P07951 284 aa21.11■□□□□ 0.97
COL4A3BP-203ENST00000380494 STK31Q9BXU1 1019 aa21.11■□□□□ 0.97
COL4A3BP-203ENST00000380494 HDGFP51858 240 aaKnown RBP21.1■□□□□ 0.97
COL4A3BP-203ENST00000380494 PLEKHG5O94827 1062 aa21.09■□□□□ 0.97
COL4A3BP-203ENST00000380494 MRE11P49959 708 aa21.09■□□□□ 0.97
COL4A3BP-203ENST00000380494 FAM13BQ9NYF5 915 aa21.09■□□□□ 0.97
COL4A3BP-203ENST00000380494 A0A0U1RQG5 324 aaPredicted RBP21.09■□□□□ 0.97
COL4A3BP-203ENST00000380494 GOLGA6L19H0YKK7 550 aa21.09■□□□□ 0.97
COL4A3BP-203ENST00000380494 NGEFQ8N5V2 710 aa21.09■□□□□ 0.97
COL4A3BP-203ENST00000380494 NFKBIBQ15653 356 aa21.08■□□□□ 0.97
COL4A3BP-203ENST00000380494 CCDC146Q8IYE0 955 aa21.08■□□□□ 0.97
COL4A3BP-203ENST00000380494 CLUAP1Q96AJ1 413 aa21.08■□□□□ 0.97
COL4A3BP-203ENST00000380494 SPAG9O60271 1321 aaKnown RBP21.08■□□□□ 0.96
COL4A3BP-203ENST00000380494 CECR2Q9BXF3 1484 aa21.08■□□□□ 0.96
COL4A3BP-203ENST00000380494 AAMPQ13685 434 aa21.07■□□□□ 0.96
COL4A3BP-203ENST00000380494 ZKSCAN2Q63HK3 967 aa21.05■□□□□ 0.96
COL4A3BP-203ENST00000380494 NOL8Q76FK4 1167 aaKnown RBP21.03■□□□□ 0.96
COL4A3BP-203ENST00000380494 NUCB2P80303 420 aa21.02■□□□□ 0.96
COL4A3BP-203ENST00000380494 CCDC39Q9UFE4 941 aa21.02■□□□□ 0.96
COL4A3BP-203ENST00000380494 BECN2A8MW95 431 aa21.01■□□□□ 0.95
COL4A3BP-203ENST00000380494 PLIN1O60240 522 aa21.01■□□□□ 0.95
COL4A3BP-203ENST00000380494 CCDC70Q6NSX1 233 aa21.01■□□□□ 0.95
COL4A3BP-203ENST00000380494 REC8O95072 547 aa21■□□□□ 0.95
COL4A3BP-203ENST00000380494 FOXD4L5Q5VV16 416 aaPredicted RBP21■□□□□ 0.95
COL4A3BP-203ENST00000380494 FOXD4L4Q8WXT5 416 aaPredicted RBP21■□□□□ 0.95
COL4A3BP-203ENST00000380494 TERF2IPQ9NYB0 399 aa21■□□□□ 0.95
COL4A3BP-203ENST00000380494 SF3A1Q15459 793 aaKnown RBP20.99■□□□□ 0.95
COL4A3BP-203ENST00000380494 NOM1Q5C9Z4 860 aaKnown RBP20.99■□□□□ 0.95
COL4A3BP-203ENST00000380494 DIAPH3Q9NSV4 1193 aa20.98■□□□□ 0.95
COL4A3BP-203ENST00000380494 ANKRD45Q5TZF3 282 aa20.98■□□□□ 0.95
COL4A3BP-203ENST00000380494 H3BQV1 296 aa20.98■□□□□ 0.95
COL4A3BP-203ENST00000380494 IFFO2Q5TF58 517 aa20.98■□□□□ 0.95
COL4A3BP-203ENST00000380494 DDX19BQ9UMR2 479 aa20.98■□□□□ 0.95
COL4A3BP-203ENST00000380494 TPM1P09493 284 aa20.96■□□□□ 0.95
COL4A3BP-203ENST00000380494 ARGLU1Q9NWB6 273 aaPredicted RBP20.96■□□□□ 0.95
COL4A3BP-203ENST00000380494 CCDC18Q5T9S5 1454 aa20.96■□□□□ 0.95
COL4A3BP-203ENST00000380494 CNTLNQ9NXG0 1405 aa20.95■□□□□ 0.94
COL4A3BP-203ENST00000380494 MROH2BQ7Z745 1585 aa20.95■□□□□ 0.94
COL4A3BP-203ENST00000380494 USP47Q96K76 1375 aa20.95■□□□□ 0.94
COL4A3BP-203ENST00000380494 TOP2AP11388 1531 aaKnown RBP20.95■□□□□ 0.94
COL4A3BP-203ENST00000380494 TSR1Q2NL82 804 aaKnown RBP20.94■□□□□ 0.94
COL4A3BP-203ENST00000380494 ZNF592Q92610 1267 aa20.94■□□□□ 0.94
COL4A3BP-203ENST00000380494 NPHP1O15259 732 aa20.93■□□□□ 0.94
COL4A3BP-203ENST00000380494 PANK3Q9H999 370 aa20.93■□□□□ 0.94
COL4A3BP-203ENST00000380494 CLSTN1O94985 981 aa20.93■□□□□ 0.94
COL4A3BP-203ENST00000380494 LMOD2Q6P5Q4 547 aa20.93■□□□□ 0.94
COL4A3BP-203ENST00000380494 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.944e-6■■■□□ 19
COL4A3BP-203ENST00000380494 CARMIL2Q6F5E8 1435 aa20.92■□□□□ 0.94
COL4A3BP-203ENST00000380494 NASPP49321 788 aaPredicted RBP20.92■□□□□ 0.94
COL4A3BP-203ENST00000380494 RAPGEF2Q9Y4G8 1499 aa20.92■□□□□ 0.94
COL4A3BP-203ENST00000380494 COG6Q9Y2V7 657 aa20.92■□□□□ 0.94
COL4A3BP-203ENST00000380494 FAM184AQ8NB25 1140 aa20.92■□□□□ 0.94
COL4A3BP-203ENST00000380494 CCDC66A2RUB6 948 aa20.91■□□□□ 0.94
COL4A3BP-203ENST00000380494 ISY1Q9ULR0 285 aaKnown RBP20.91■□□□□ 0.94
COL4A3BP-203ENST00000380494 RSPH4AQ5TD94 716 aa20.9■□□□□ 0.94
COL4A3BP-203ENST00000380494 SLC4A10Q6U841 1118 aa20.9■□□□□ 0.94
COL4A3BP-203ENST00000380494 CCDC173Q0VFZ6 552 aa20.9■□□□□ 0.94
COL4A3BP-203ENST00000380494 CCAR2Q8N163 923 aaKnown RBP20.9■□□□□ 0.94
COL4A3BP-203ENST00000380494 R3HCC1Q9Y3T6 440 aaKnown RBP20.9■□□□□ 0.94
COL4A3BP-203ENST00000380494 ST20-MTHFSA0A0A6YYL1 179 aa20.9■□□□□ 0.94
COL4A3BP-203ENST00000380494 C22orf23Q9BZE7 217 aa20.9■□□□□ 0.94
COL4A3BP-203ENST00000380494 ACBD3Q9H3P7 528 aa20.9■□□□□ 0.94
COL4A3BP-203ENST00000380494 ROCK1Q13464 1354 aa20.89■□□□□ 0.93
COL4A3BP-203ENST00000380494 GORABQ5T7V8 394 aa20.89■□□□□ 0.93
COL4A3BP-203ENST00000380494 TPD52L1Q16890 204 aaPredicted RBP20.88■□□□□ 0.93
COL4A3BP-203ENST00000380494 RASSF8Q8NHQ8 419 aa20.88■□□□□ 0.93
COL4A3BP-203ENST00000380494 RUFY2Q8WXA3 655 aa20.88■□□□□ 0.93
COL4A3BP-203ENST00000380494 LETM1O95202 739 aaPredicted RBP20.87■□□□□ 0.93
COL4A3BP-203ENST00000380494 RILPL2Q969X0 211 aa20.87■□□□□ 0.93
COL4A3BP-203ENST00000380494 CWC15Q9P013 229 aaKnown RBP20.87■□□□□ 0.93
COL4A3BP-203ENST00000380494 STK26Q9P289 416 aa20.87■□□□□ 0.93
COL4A3BP-203ENST00000380494 CCDC7Q96M83 1385 aa20.87■□□□□ 0.93
COL4A3BP-203ENST00000380494 SOX12O15370 315 aa20.87■□□□□ 0.93
COL4A3BP-203ENST00000380494 UACAQ9BZF9 1416 aa20.86■□□□□ 0.93
COL4A3BP-203ENST00000380494 INTS3Q68E01 1043 aaKnown RBP20.86■□□□□ 0.93
COL4A3BP-203ENST00000380494 MCTP1Q6DN14 999 aa20.86■□□□□ 0.93
COL4A3BP-203ENST00000380494 DZIP1LQ8IYY4 767 aaKnown RBP20.86■□□□□ 0.93
COL4A3BP-203ENST00000380494 HMGN5P82970 282 aaKnown RBP20.86■□□□□ 0.93
COL4A3BP-203ENST00000380494 CCDC144AA2RUR9 1427 aa20.86■□□□□ 0.93
COL4A3BP-203ENST00000380494 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
COL4A3BP-203ENST00000380494 TRAK2O60296 914 aa20.85■□□□□ 0.93
COL4A3BP-203ENST00000380494 UBE2Q2Q8WVN8 375 aa20.85■□□□□ 0.93
COL4A3BP-203ENST00000380494 HOMER1Q86YM7 354 aa20.84■□□□□ 0.93
COL4A3BP-203ENST00000380494 BRPF3Q9ULD4 1205 aa20.84■□□□□ 0.93
COL4A3BP-203ENST00000380494 CREBRFQ8IUR6 639 aa20.83■□□□□ 0.92
COL4A3BP-203ENST00000380494 SASS6Q6UVJ0 657 aa20.82■□□□□ 0.92
COL4A3BP-203ENST00000380494 RRP7AQ9Y3A4 280 aaKnown RBP20.82■□□□□ 0.92
COL4A3BP-203ENST00000380494 IFT57Q9NWB7 429 aa20.82■□□□□ 0.92
COL4A3BP-203ENST00000380494 BRD4O60885 1362 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms