RNA–Protein interactions for RNA: ENST00000378383.5

FNDC3A-201, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 2 BASIC

Gene FNDC3A, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-201ENST00000378383 CARMIL2Q6F5E8 1435 aa13.45□□□□□ -0.26
FNDC3A-201ENST00000378383 KIAA1107Q9UPP5 1409 aa13.45□□□□□ -0.26
FNDC3A-201ENST00000378383 CEP170Q5SW79 1584 aa13.45□□□□□ -0.26
FNDC3A-201ENST00000378383 ARID4BQ4LE39 1312 aaPredicted RBP13.44□□□□□ -0.26
FNDC3A-201ENST00000378383 C11orf95C9JLR9 678 aaPredicted RBP13.44□□□□□ -0.26
FNDC3A-201ENST00000378383 SAMD1Q6SPF0 538 aaPredicted RBP13.44□□□□□ -0.26
FNDC3A-201ENST00000378383 CFDP1Q9UEE9 299 aaPredicted RBP13.44□□□□□ -0.26
FNDC3A-201ENST00000378383 SHANK2Q9UPX8 1470 aa13.44□□□□□ -0.26
FNDC3A-201ENST00000378383 BRPF1P55201 1214 aaPredicted RBP13.44□□□□□ -0.26
FNDC3A-201ENST00000378383 ANKRD30AQ9BXX3 1397 aa13.42□□□□□ -0.26
FNDC3A-201ENST00000378383 PLB1Q6P1J6 1458 aa13.42□□□□□ -0.26
FNDC3A-201ENST00000378383 KIF7Q2M1P5 1343 aa13.41□□□□□ -0.26
FNDC3A-201ENST00000378383 UHRF1BP1Q6BDS2 1440 aa13.41□□□□□ -0.26
FNDC3A-201ENST00000378383 ARID3CA6NKF2 412 aa13.4□□□□□ -0.26
FNDC3A-201ENST00000378383 ABCA8O94911 1581 aa13.4□□□□□ -0.26
FNDC3A-201ENST00000378383 CHMP7Q8WUX9 453 aaPredicted RBP13.4□□□□□ -0.26
FNDC3A-201ENST00000378383 KIF14Q15058 1648 aa13.4□□□□□ -0.26
FNDC3A-201ENST00000378383 KDM5DQ9BY66 1539 aa13.4□□□□□ -0.26
FNDC3A-201ENST00000378383 ZBED9Q6R2W3 1325 aa13.4□□□□□ -0.26
FNDC3A-201ENST00000378383 ABCC10Q5T3U5 1492 aa13.39□□□□□ -0.27
FNDC3A-201ENST00000378383 JPH4Q96JJ6 628 aa13.39□□□□□ -0.27
FNDC3A-201ENST00000378383 ANP32EQ9BTT0 268 aa13.38□□□□□ -0.27
FNDC3A-201ENST00000378383 ANKRD50Q9ULJ7 1429 aa13.38□□□□□ -0.27
FNDC3A-201ENST00000378383 RBM19Q9Y4C8 960 aaKnown RBP13.38□□□□□ -0.27
FNDC3A-201ENST00000378383 ARHGEF12Q9NZN5 1544 aa13.37□□□□□ -0.27
FNDC3A-201ENST00000378383 CDC42BPAQ5VT25 1732 aa13.36□□□□□ -0.27
FNDC3A-201ENST00000378383 CCDC184Q52MB2 194 aa13.35□□□□□ -0.27
FNDC3A-201ENST00000378383 DHX29Q7Z478 1369 aaKnown RBP13.35□□□□□ -0.27
FNDC3A-201ENST00000378383 PTPRGP23470 1445 aa13.35□□□□□ -0.27
FNDC3A-201ENST00000378383 ARHGEF5Q12774 1597 aa13.35□□□□□ -0.27
FNDC3A-201ENST00000378383 PLEKHD1A6NEE1 506 aa13.35□□□□□ -0.27
FNDC3A-201ENST00000378383 ROCK2O75116 1388 aaKnown RBP13.35□□□□□ -0.27
FNDC3A-201ENST00000378383 ATP10BO94823 1461 aa13.35□□□□□ -0.27
FNDC3A-201ENST00000378383 KDM5CP41229 1560 aa13.34□□□□□ -0.27
FNDC3A-201ENST00000378383 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
FNDC3A-201ENST00000378383 MRS2Q9HD23 443 aa13.34□□□□□ -0.27
FNDC3A-201ENST00000378383 RALGAPBQ86X10 1494 aa13.34□□□□□ -0.27
FNDC3A-201ENST00000378383 PPP4R2Q9NY27 417 aa13.33□□□□□ -0.28
FNDC3A-201ENST00000378383 USP47Q96K76 1375 aa13.33□□□□□ -0.28
FNDC3A-201ENST00000378383 C9orf84Q5VXU9 1444 aa13.33□□□□□ -0.28
FNDC3A-201ENST00000378383 RSPH4AQ5TD94 716 aa13.31□□□□□ -0.28
FNDC3A-201ENST00000378383 BCORL1Q5H9F3 1711 aa13.31□□□□□ -0.28
FNDC3A-201ENST00000378383 KTN1Q86UP2 1357 aaKnown RBP13.29□□□□□ -0.28
FNDC3A-201ENST00000378383 NUP155O75694 1391 aa13.29□□□□□ -0.28
FNDC3A-201ENST00000378383 FANCIQ9NVI1 1328 aa13.29□□□□□ -0.28
FNDC3A-201ENST00000378383 FAM9BQ8IZU0 186 aa13.29□□□□□ -0.28
FNDC3A-201ENST00000378383 TSPY4P0CV99 314 aa13.28□□□□□ -0.28
FNDC3A-201ENST00000378383 TSPY10P0CW01 314 aa13.28□□□□□ -0.28
FNDC3A-201ENST00000378383 ZNF777Q9ULD5 760 aaPredicted RBP13.28□□□□□ -0.28
FNDC3A-201ENST00000378383 SMG6Q86US8 1419 aaKnown RBP13.28□□□□□ -0.28
FNDC3A-201ENST00000378383 RNF123Q5XPI4 1314 aa13.26□□□□□ -0.29
FNDC3A-201ENST00000378383 HS6ST3Q8IZP7 471 aa13.26□□□□□ -0.29
FNDC3A-201ENST00000378383 KIF15Q9NS87 1388 aa13.25□□□□□ -0.29
FNDC3A-201ENST00000378383 U3KPZ7 1027 aaPredicted RBP13.25□□□□□ -0.29
FNDC3A-201ENST00000378383 CCDC141Q6ZP82 1450 aa13.25□□□□□ -0.29
FNDC3A-201ENST00000378383 MAST1Q9Y2H9 1570 aa13.24□□□□□ -0.29
FNDC3A-201ENST00000378383 PREX2Q70Z35 1606 aa13.23□□□□□ -0.29
FNDC3A-201ENST00000378383 LMOD2Q6P5Q4 547 aa13.22□□□□□ -0.29
FNDC3A-201ENST00000378383 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.22□□□□□ -0.29
FNDC3A-201ENST00000378383 PNISRQ8TF01 805 aaKnown RBP13.22□□□□□ -0.29
FNDC3A-201ENST00000378383 CARD11Q9BXL7 1154 aa13.22□□□□□ -0.29
FNDC3A-201ENST00000378383 SAMD9LQ8IVG5 1584 aa13.21□□□□□ -0.29
FNDC3A-201ENST00000378383 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.29
FNDC3A-201ENST00000378383 NUDCQ9Y266 331 aa13.21□□□□□ -0.29
FNDC3A-201ENST00000378383 FAM135AQ9P2D6 1515 aa13.21□□□□□ -0.3
FNDC3A-201ENST00000378383 CDC42BPBQ9Y5S2 1711 aa13.21□□□□□ -0.3
FNDC3A-201ENST00000378383 BRD4O60885 1362 aaPredicted RBP13.21□□□□□ -0.3
FNDC3A-201ENST00000378383 LRPPRCP42704 1394 aaKnown RBP13.21□□□□□ -0.3
FNDC3A-201ENST00000378383 RALBP1Q15311 655 aa13.2□□□□□ -0.3
FNDC3A-201ENST00000378383 IRX6P78412 446 aaPredicted RBP13.2□□□□□ -0.3
FNDC3A-201ENST00000378383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.2□□□□□ -0.33e-6■■■□□ 15.4
FNDC3A-201ENST00000378383 GPRASP1Q5JY77 1395 aa13.19□□□□□ -0.3
FNDC3A-201ENST00000378383 E9PCH4 1651 aa13.19□□□□□ -0.3
FNDC3A-201ENST00000378383 UNC13BO14795 1591 aa13.19□□□□□ -0.3
FNDC3A-201ENST00000378383 NEUROD2Q15784 382 aa13.19□□□□□ -0.3
FNDC3A-201ENST00000378383 ATP10AO60312 1499 aa13.18□□□□□ -0.3
FNDC3A-201ENST00000378383 LAMC1P11047 1609 aa13.18□□□□□ -0.3
FNDC3A-201ENST00000378383 HNRNPMP52272 730 aaKnown RBP eCLIP13.18□□□□□ -0.3
FNDC3A-201ENST00000378383 PRAG1Q86YV5 1406 aa13.17□□□□□ -0.3
FNDC3A-201ENST00000378383 PLEKHH2Q8IVE3 1493 aa13.17□□□□□ -0.3
FNDC3A-201ENST00000378383 GTPBP6O43824 516 aaPredicted RBP13.17□□□□□ -0.3
FNDC3A-201ENST00000378383 PLXNC1O60486 1568 aa13.17□□□□□ -0.3
FNDC3A-201ENST00000378383 INSRP06213 1382 aa13.17□□□□□ -0.3
FNDC3A-201ENST00000378383 ZNF326Q5BKZ1 582 aaKnown RBP13.17□□□□□ -0.3
FNDC3A-201ENST00000378383 SHROOM2Q13796 1616 aa13.16□□□□□ -0.3
FNDC3A-201ENST00000378383 TRPM1Q7Z4N2 1603 aa13.16□□□□□ -0.3
FNDC3A-201ENST00000378383 MYBBP1AQ9BQG0 1328 aaKnown RBP13.16□□□□□ -0.3
FNDC3A-201ENST00000378383 WASHC2CQ9Y4E1 1318 aa13.16□□□□□ -0.3
FNDC3A-201ENST00000378383 ST20-MTHFSA0A0A6YYL1 179 aa13.16□□□□□ -0.3
FNDC3A-201ENST00000378383 DCAF11Q8TEB1 546 aa13.15□□□□□ -0.3
FNDC3A-201ENST00000378383 CCDC144AA2RUR9 1427 aa13.15□□□□□ -0.3
FNDC3A-201ENST00000378383 TMC1Q8TDI8 760 aa13.15□□□□□ -0.3
FNDC3A-201ENST00000378383 IQGAP3Q86VI3 1631 aa13.14□□□□□ -0.31
FNDC3A-201ENST00000378383 ZMYM4Q5VZL5 1548 aa13.14□□□□□ -0.31
FNDC3A-201ENST00000378383 PLA2R1Q13018 1463 aa13.14□□□□□ -0.31
FNDC3A-201ENST00000378383 MAGI2Q86UL8 1455 aa13.14□□□□□ -0.31
FNDC3A-201ENST00000378383 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
FNDC3A-201ENST00000378383 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
FNDC3A-201ENST00000378383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.12□□□□□ -0.31
FNDC3A-201ENST00000378383 ZMYND15Q9H091 742 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms