RNA–Protein interactions for RNA: ENST00000378383.5

FNDC3A-201, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 2 BASIC

Gene FNDC3A, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-201ENST00000378383 CHIC1Q5VXU3 224 aa20.98■□□□□ 0.95
FNDC3A-201ENST00000378383 NISCHQ9Y2I1 1504 aa20.22■□□□□ 0.83
FNDC3A-201ENST00000378383 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
FNDC3A-201ENST00000378383 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
FNDC3A-201ENST00000378383 EHMT2Q96KQ7 1210 aa18.1■□□□□ 0.49
FNDC3A-201ENST00000378383 SLC24A1O60721 1099 aa17.76■□□□□ 0.43
FNDC3A-201ENST00000378383 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
FNDC3A-201ENST00000378383 KCNA4P22459 653 aa17.32■□□□□ 0.36
FNDC3A-201ENST00000378383 CCDC180Q9P1Z9 1646 aa17.26■□□□□ 0.35
FNDC3A-201ENST00000378383 CSRNP3Q8WYN3 585 aa17.15■□□□□ 0.34
FNDC3A-201ENST00000378383 ZCCHC6Q5VYS8 1495 aaKnown RBP17.14■□□□□ 0.33
FNDC3A-201ENST00000378383 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
FNDC3A-201ENST00000378383 RTN4Q9NQC3 1192 aaKnown RBP16.82■□□□□ 0.28
FNDC3A-201ENST00000378383 DCAF1Q9Y4B6 1507 aa16.76■□□□□ 0.27
FNDC3A-201ENST00000378383 ADRA2BP18089 450 aa16.73■□□□□ 0.27
FNDC3A-201ENST00000378383 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
FNDC3A-201ENST00000378383 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
FNDC3A-201ENST00000378383 AMER1Q5JTC6 1135 aaPredicted RBP16.58■□□□□ 0.25
FNDC3A-201ENST00000378383 SENP3Q9H4L4 574 aaPredicted RBP16.57■□□□□ 0.24
FNDC3A-201ENST00000378383 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
FNDC3A-201ENST00000378383 MYO15BQ96JP2 1530 aa16.3■□□□□ 0.2
FNDC3A-201ENST00000378383 ABCC9O60706 1549 aa16.15■□□□□ 0.18
FNDC3A-201ENST00000378383 PPP6R1Q9UPN7 881 aa16.1■□□□□ 0.17
FNDC3A-201ENST00000378383 ZBTB22O15209 634 aa16.04■□□□□ 0.16
FNDC3A-201ENST00000378383 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
FNDC3A-201ENST00000378383 HRCP23327 699 aa15.97■□□□□ 0.15
FNDC3A-201ENST00000378383 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
FNDC3A-201ENST00000378383 SCRIBQ14160 1630 aa15.94■□□□□ 0.14
FNDC3A-201ENST00000378383 NACADO15069 1562 aa15.93■□□□□ 0.14
FNDC3A-201ENST00000378383 RB1CC1Q8TDY2 1594 aa15.86■□□□□ 0.13
FNDC3A-201ENST00000378383 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.12
FNDC3A-201ENST00000378383 PCGF6Q9BYE7 350 aa15.8■□□□□ 0.12
FNDC3A-201ENST00000378383 LOC105371045A0A1W2PR82 267 aa15.77■□□□□ 0.12
FNDC3A-201ENST00000378383 NPM3O75607 178 aaKnown RBP15.68■□□□□ 0.1
FNDC3A-201ENST00000378383 TRIM26Q12899 539 aaPredicted RBP15.66■□□□□ 0.1
FNDC3A-201ENST00000378383 CECR2Q9BXF3 1484 aa15.65■□□□□ 0.1
FNDC3A-201ENST00000378383 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
FNDC3A-201ENST00000378383 MROH2BQ7Z745 1585 aa15.64■□□□□ 0.09
FNDC3A-201ENST00000378383 PRKCSHP14314 528 aaPredicted RBP15.62■□□□□ 0.09
FNDC3A-201ENST00000378383 BAZ1AQ9NRL2 1556 aaPredicted RBP15.55■□□□□ 0.08
FNDC3A-201ENST00000378383 WIZO95785 1651 aa15.52■□□□□ 0.08
FNDC3A-201ENST00000378383 EIF4G1Q04637 1599 aaKnown RBP15.46■□□□□ 0.07
FNDC3A-201ENST00000378383 ZEB1P37275 1124 aaPredicted RBP15.43■□□□□ 0.06
FNDC3A-201ENST00000378383 PPARGC1BQ86YN6 1023 aaKnown RBP15.41■□□□□ 0.06
FNDC3A-201ENST00000378383 TOP2AP11388 1531 aaKnown RBP15.4■□□□□ 0.06
FNDC3A-201ENST00000378383 SMARCA4P51532 1647 aa15.37■□□□□ 0.05
FNDC3A-201ENST00000378383 FOXD1Q16676 465 aa15.36■□□□□ 0.05
FNDC3A-201ENST00000378383 FKBP8Q14318 412 aa15.36■□□□□ 0.05
FNDC3A-201ENST00000378383 FOXD4L1Q9NU39 408 aa15.34■□□□□ 0.05
FNDC3A-201ENST00000378383 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.04
FNDC3A-201ENST00000378383 TAOK2Q9UL54 1235 aa15.31■□□□□ 0.04
FNDC3A-201ENST00000378383 UNC13AQ9UPW8 1703 aa15.3■□□□□ 0.04
FNDC3A-201ENST00000378383 DAXXQ9UER7 740 aaPredicted RBP15.29■□□□□ 0.04
FNDC3A-201ENST00000378383 PLCB2Q00722 1185 aa15.29■□□□□ 0.04
FNDC3A-201ENST00000378383 CCDC88BA6NC98 1476 aa15.28■□□□□ 0.04
FNDC3A-201ENST00000378383 SMARCA2P51531 1590 aa15.28■□□□□ 0.04
FNDC3A-201ENST00000378383 BCANQ96GW7 911 aa15.25■□□□□ 0.03
FNDC3A-201ENST00000378383 PEG3Q9GZU2 1588 aa15.2■□□□□ 0.02
FNDC3A-201ENST00000378383 EEA1Q15075 1411 aa15.19■□□□□ 0.02
FNDC3A-201ENST00000378383 WRNQ14191 1432 aaPredicted RBP eCLIP15.18■□□□□ 0.02
FNDC3A-201ENST00000378383 BICRAQ9NZM4 1560 aa15.15■□□□□ 0.02
FNDC3A-201ENST00000378383 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
FNDC3A-201ENST00000378383 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
FNDC3A-201ENST00000378383 HAP1P54257 671 aaPredicted RBP15.09■□□□□ 0.01
FNDC3A-201ENST00000378383 TPRNQ4KMQ1 711 aa15.05■□□□□ -0
FNDC3A-201ENST00000378383 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
FNDC3A-201ENST00000378383 SOGA1O94964 1423 aa15.04■□□□□ -0
FNDC3A-201ENST00000378383 CEP162Q5TB80 1403 aa15.04■□□□□ -0
FNDC3A-201ENST00000378383 TIMELESSQ9UNS1 1208 aa15□□□□□ -0.01
FNDC3A-201ENST00000378383 GOLGA3Q08378 1498 aa14.98□□□□□ -0.01
FNDC3A-201ENST00000378383 ATAD2BQ9ULI0 1458 aa14.97□□□□□ -0.01
FNDC3A-201ENST00000378383 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
FNDC3A-201ENST00000378383 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
FNDC3A-201ENST00000378383 RUSC2Q8N2Y8 1516 aa14.93□□□□□ -0.02
FNDC3A-201ENST00000378383 KIF21BO75037 1637 aa14.92□□□□□ -0.02
FNDC3A-201ENST00000378383 CEP164Q9UPV0 1460 aa14.91□□□□□ -0.02
FNDC3A-201ENST00000378383 ARXQ96QS3 562 aa14.9□□□□□ -0.02
FNDC3A-201ENST00000378383 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
FNDC3A-201ENST00000378383 SYNJ1O43426 1573 aa14.88□□□□□ -0.03
FNDC3A-201ENST00000378383 CCER1Q8TC90 406 aaPredicted RBP14.87□□□□□ -0.03
FNDC3A-201ENST00000378383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.85□□□□□ -0.03
FNDC3A-201ENST00000378383 UBTFP17480 764 aaKnown RBP14.85□□□□□ -0.03
FNDC3A-201ENST00000378383 TULP1O00294 542 aaPredicted RBP14.84□□□□□ -0.03
FNDC3A-201ENST00000378383 VSIG10Q8N0Z9 540 aa14.82□□□□□ -0.04
FNDC3A-201ENST00000378383 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
FNDC3A-201ENST00000378383 TOP2BQ02880 1626 aa14.79□□□□□ -0.04
FNDC3A-201ENST00000378383 CLIP1P30622 1438 aa14.76□□□□□ -0.05
FNDC3A-201ENST00000378383 VPS8Q8N3P4 1428 aa14.75□□□□□ -0.05
FNDC3A-201ENST00000378383 BIVM-ERCC5R4GMW8 1640 aa14.75□□□□□ -0.05
FNDC3A-201ENST00000378383 HMGXB3Q12766 1538 aa14.75□□□□□ -0.05
FNDC3A-201ENST00000378383 NCAPD3P42695 1498 aa14.74□□□□□ -0.05
FNDC3A-201ENST00000378383 ERICH3Q5RHP9 1530 aa14.71□□□□□ -0.05
FNDC3A-201ENST00000378383 RAPGEF2Q9Y4G8 1499 aa14.7□□□□□ -0.06
FNDC3A-201ENST00000378383 PRXQ9BXM0 1461 aa14.67□□□□□ -0.06
FNDC3A-201ENST00000378383 KDM2AQ9Y2K7 1162 aa14.66□□□□□ -0.06
FNDC3A-201ENST00000378383 DIEXFQ68CQ4 756 aaKnown RBP14.65□□□□□ -0.06
FNDC3A-201ENST00000378383 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
FNDC3A-201ENST00000378383 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
FNDC3A-201ENST00000378383 CFTRP13569 1480 aa14.6□□□□□ -0.07
FNDC3A-201ENST00000378383 TTBK1Q5TCY1 1321 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms