RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 WDR7Q9Y4E6 1490 aa21.6■■□□□ 1.05
ARHGEF1-204ENST00000378152 PKD2Q13563 968 aa21.6■■□□□ 1.05
ARHGEF1-204ENST00000378152 TMC1Q8TDI8 760 aa21.59■■□□□ 1.05
ARHGEF1-204ENST00000378152 ABCA9Q8IUA7 1624 aa21.58■■□□□ 1.05
ARHGEF1-204ENST00000378152 KIAA1107Q9UPP5 1409 aa21.58■■□□□ 1.05
ARHGEF1-204ENST00000378152 ARHGAP5Q13017 1502 aa21.57■■□□□ 1.04
ARHGEF1-204ENST00000378152 PLCH2O75038 1416 aa21.57■■□□□ 1.04
ARHGEF1-204ENST00000378152 CCDC141Q6ZP82 1450 aa21.57■■□□□ 1.04
ARHGEF1-204ENST00000378152 PNISRQ8TF01 805 aaKnown RBP21.56■■□□□ 1.04
ARHGEF1-204ENST00000378152 RNF123Q5XPI4 1314 aa21.55■■□□□ 1.04
ARHGEF1-204ENST00000378152 C9orf84Q5VXU9 1444 aa21.55■■□□□ 1.04
ARHGEF1-204ENST00000378152 MYT1LQ9UL68 1186 aa21.55■■□□□ 1.04
ARHGEF1-204ENST00000378152 ANKRD30AQ9BXX3 1397 aa21.54■■□□□ 1.04
ARHGEF1-204ENST00000378152 SYCP2Q9BX26 1530 aa21.53■■□□□ 1.04
ARHGEF1-204ENST00000378152 PLXNC1O60486 1568 aa21.52■■□□□ 1.04
ARHGEF1-204ENST00000378152 ABCC1P33527 1531 aa21.52■■□□□ 1.04
ARHGEF1-204ENST00000378152 ANP32AP39687 249 aaKnown RBP21.52■■□□□ 1.04
ARHGEF1-204ENST00000378152 RSPH4AQ5TD94 716 aa21.52■■□□□ 1.04
ARHGEF1-204ENST00000378152 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
ARHGEF1-204ENST00000378152 CARD11Q9BXL7 1154 aa21.51■■□□□ 1.03
ARHGEF1-204ENST00000378152 KDM5CP41229 1560 aa21.5■■□□□ 1.03
ARHGEF1-204ENST00000378152 SALL2Q9Y467 1007 aaPredicted RBP21.49■■□□□ 1.03
ARHGEF1-204ENST00000378152 KDM5DQ9BY66 1539 aa21.49■■□□□ 1.03
ARHGEF1-204ENST00000378152 IPO9Q96P70 1041 aaKnown RBP21.48■■□□□ 1.03
ARHGEF1-204ENST00000378152 ASXL2Q76L83 1435 aa21.47■■□□□ 1.03
ARHGEF1-204ENST00000378152 ST20-MTHFSA0A0A6YYL1 179 aa21.46■■□□□ 1.03
ARHGEF1-204ENST00000378152 ARID4BQ4LE39 1312 aaPredicted RBP21.45■■□□□ 1.02
ARHGEF1-204ENST00000378152 ARHGEF12Q9NZN5 1544 aa21.45■■□□□ 1.02
ARHGEF1-204ENST00000378152 ZBTB47Q9UFB7 747 aaPredicted RBP21.45■■□□□ 1.02
ARHGEF1-204ENST00000378152 KIF15Q9NS87 1388 aa21.43■■□□□ 1.02
ARHGEF1-204ENST00000378152 ANKRD50Q9ULJ7 1429 aa21.43■■□□□ 1.02
ARHGEF1-204ENST00000378152 ROCK2O75116 1388 aaKnown RBP21.42■■□□□ 1.02
ARHGEF1-204ENST00000378152 NUP155O75694 1391 aa21.42■■□□□ 1.02
ARHGEF1-204ENST00000378152 NPM2Q86SE8 214 aaKnown RBP21.42■■□□□ 1.02
ARHGEF1-204ENST00000378152 EXOC6Q8TAG9 804 aa21.42■■□□□ 1.02
ARHGEF1-204ENST00000378152 DCAF11Q8TEB1 546 aa21.41■■□□□ 1.02
ARHGEF1-204ENST00000378152 HNRNPMP52272 730 aaKnown RBP eCLIP21.4■■□□□ 1.02
ARHGEF1-204ENST00000378152 MYBBP1AQ9BQG0 1328 aaKnown RBP21.4■■□□□ 1.02
ARHGEF1-204ENST00000378152 RRP1P56182 461 aaKnown RBP21.39■■□□□ 1.02
ARHGEF1-204ENST00000378152 RALGAPBQ86X10 1494 aa21.39■■□□□ 1.02
ARHGEF1-204ENST00000378152 UNC13BO14795 1591 aa21.39■■□□□ 1.02
ARHGEF1-204ENST00000378152 RIMBP3CA6NJZ7 1639 aa21.39■■□□□ 1.01
ARHGEF1-204ENST00000378152 RIMBP3BA6NNM3 1639 aa21.39■■□□□ 1.01
ARHGEF1-204ENST00000378152 RIMBP3Q9UFD9 1639 aa21.39■■□□□ 1.01
ARHGEF1-204ENST00000378152 TSPY4P0CV99 314 aa21.39■■□□□ 1.01
ARHGEF1-204ENST00000378152 TSPY10P0CW01 314 aa21.39■■□□□ 1.01
ARHGEF1-204ENST00000378152 EFCAB2Q5VUJ9 269 aa21.39■■□□□ 1.01
ARHGEF1-204ENST00000378152 CFAP74Q9C0B2 1584 aa21.38■■□□□ 1.01
ARHGEF1-204ENST00000378152 LRPPRCP42704 1394 aaKnown RBP21.38■■□□□ 1.01
ARHGEF1-204ENST00000378152 UHRF1BP1Q6BDS2 1440 aa21.37■■□□□ 1.01
ARHGEF1-204ENST00000378152 BRD4O60885 1362 aaPredicted RBP21.36■■□□□ 1.01
ARHGEF1-204ENST00000378152 RTL5Q5HYW3 569 aaPredicted RBP21.36■■□□□ 1.01
ARHGEF1-204ENST00000378152 RCAN3Q9UKA8 241 aa21.36■■□□□ 1.01
ARHGEF1-204ENST00000378152 DUOX2Q9NRD8 1548 aa21.35■■□□□ 1.01
ARHGEF1-204ENST00000378152 RALBP1Q15311 655 aa21.35■■□□□ 1.01
ARHGEF1-204ENST00000378152 RTEL1-TNFRSF6BF6WH68 1400 aa21.34■■□□□ 1.01
ARHGEF1-204ENST00000378152 FANCAO15360 1455 aa21.34■■□□□ 1.01
ARHGEF1-204ENST00000378152 INO80Q9ULG1 1556 aaPredicted RBP21.34■■□□□ 1.01
ARHGEF1-204ENST00000378152 ZFYVE16Q7Z3T8 1539 aa21.33■■□□□ 1.01
ARHGEF1-204ENST00000378152 MAGI2Q86UL8 1455 aa21.32■■□□□ 1
ARHGEF1-204ENST00000378152 ERBINQ96RT1 1412 aa21.31■■□□□ 1
ARHGEF1-204ENST00000378152 TRAPPC8Q9Y2L5 1435 aa21.31■■□□□ 1
ARHGEF1-204ENST00000378152 CDCA7LQ96GN5 454 aa21.3■■□□□ 1
ARHGEF1-204ENST00000378152 IQGAP3Q86VI3 1631 aa21.29■■□□□ 1
ARHGEF1-204ENST00000378152 NPM1P06748 294 aaKnown RBP eCLIP21.28■■□□□ 1
ARHGEF1-204ENST00000378152 GLI2P10070 1586 aa21.27■■□□□ 1
ARHGEF1-204ENST00000378152 PDE4AP27815 886 aa21.27■■□□□ 1
ARHGEF1-204ENST00000378152 PLIN1O60240 522 aa21.27■□□□□ 0.99
ARHGEF1-204ENST00000378152 NLRP13Q86W25 1043 aa21.27■□□□□ 0.99
ARHGEF1-204ENST00000378152 TCERG1O14776 1098 aaKnown RBP21.26■□□□□ 0.99
ARHGEF1-204ENST00000378152 RGL3Q3MIN7 710 aa21.26■□□□□ 0.99
ARHGEF1-204ENST00000378152 ANO8Q9HCE9 1232 aaPredicted RBP21.26■□□□□ 0.99
ARHGEF1-204ENST00000378152 KTN1Q86UP2 1357 aaKnown RBP21.26■□□□□ 0.99
ARHGEF1-204ENST00000378152 LAS1LQ9Y4W2 734 aaKnown RBP21.25■□□□□ 0.99
ARHGEF1-204ENST00000378152 MAP3K4Q9Y6R4 1608 aa21.25■□□□□ 0.99
ARHGEF1-204ENST00000378152 ADGRL1O94910 1474 aa21.25■□□□□ 0.99
ARHGEF1-204ENST00000378152 FAM135AQ9P2D6 1515 aa21.24■□□□□ 0.99
ARHGEF1-204ENST00000378152 CC2D1BQ5T0F9 858 aaKnown RBP21.24■□□□□ 0.99
ARHGEF1-204ENST00000378152 ATP7AQ04656 1500 aa21.24■□□□□ 0.99
ARHGEF1-204ENST00000378152 DEPDC5O75140 1603 aa21.24■□□□□ 0.99
ARHGEF1-204ENST00000378152 NBPF1Q3BBV0 1214 aa21.23■□□□□ 0.99
ARHGEF1-204ENST00000378152 SKAP1Q86WV1 359 aa21.23■□□□□ 0.99
ARHGEF1-204ENST00000378152 EIF2AK4Q9P2K8 1649 aaKnown RBP21.22■□□□□ 0.99
ARHGEF1-204ENST00000378152 E9PCH4 1651 aa21.22■□□□□ 0.99
ARHGEF1-204ENST00000378152 PARD3Q8TEW0 1356 aa21.21■□□□□ 0.99
ARHGEF1-204ENST00000378152 BACH2Q9BYV9 841 aa21.2■□□□□ 0.98
ARHGEF1-204ENST00000378152 CD109Q6YHK3 1445 aa21.2■□□□□ 0.98
ARHGEF1-204ENST00000378152 PDE3BQ13370 1112 aa21.2■□□□□ 0.98
ARHGEF1-204ENST00000378152 NEO1Q92859 1461 aa21.19■□□□□ 0.98
ARHGEF1-204ENST00000378152 PER1O15534 1290 aaPredicted RBP21.18■□□□□ 0.98
ARHGEF1-204ENST00000378152 SCAPERQ9BY12 1400 aa21.17■□□□□ 0.98
ARHGEF1-204ENST00000378152 KIDINS220Q9ULH0 1771 aa21.17■□□□□ 0.98
ARHGEF1-204ENST00000378152 ZNF518AQ6AHZ1 1483 aa21.17■□□□□ 0.98
ARHGEF1-204ENST00000378152 CRBNQ96SW2 442 aa21.16■□□□□ 0.98
ARHGEF1-204ENST00000378152 NEFMP07197 916 aa21.16■□□□□ 0.98
ARHGEF1-204ENST00000378152 SPAG9O60271 1321 aaKnown RBP21.16■□□□□ 0.98
ARHGEF1-204ENST00000378152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.15■□□□□ 0.981e-6■■□□□ 14.4
ARHGEF1-204ENST00000378152 POGZQ7Z3K3 1410 aa21.14■□□□□ 0.98
ARHGEF1-204ENST00000378152 VWDEQ8N2E2 1590 aa21.14■□□□□ 0.97
ARHGEF1-204ENST00000378152 PRAG1Q86YV5 1406 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms