RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 NISCHQ9Y2I1 1504 aa33.31■■■□□ 2.92
ARHGEF1-204ENST00000378152 CCDC180Q9P1Z9 1646 aa29.12■■■□□ 2.25
ARHGEF1-204ENST00000378152 ZCCHC6Q5VYS8 1495 aaKnown RBP28.06■■■□□ 2.08
ARHGEF1-204ENST00000378152 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
ARHGEF1-204ENST00000378152 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
ARHGEF1-204ENST00000378152 SUPT5HO00267 1087 aaKnown RBP27.46■■□□□ 1.99
ARHGEF1-204ENST00000378152 MYO15BQ96JP2 1530 aa27.32■■□□□ 1.96
ARHGEF1-204ENST00000378152 ABCC9O60706 1549 aa27.05■■□□□ 1.92
ARHGEF1-204ENST00000378152 NACADO15069 1562 aa26.99■■□□□ 1.91
ARHGEF1-204ENST00000378152 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
ARHGEF1-204ENST00000378152 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
ARHGEF1-204ENST00000378152 RB1CC1Q8TDY2 1594 aa26.68■■□□□ 1.86
ARHGEF1-204ENST00000378152 HRCP23327 699 aa26.63■■□□□ 1.85
ARHGEF1-204ENST00000378152 SCRIBQ14160 1630 aa26.59■■□□□ 1.85
ARHGEF1-204ENST00000378152 PCGF6Q9BYE7 350 aa26.47■■□□□ 1.83
ARHGEF1-204ENST00000378152 UNC13AQ9UPW8 1703 aa26.23■■□□□ 1.79
ARHGEF1-204ENST00000378152 PPARGC1BQ86YN6 1023 aaKnown RBP26.2■■□□□ 1.79
ARHGEF1-204ENST00000378152 LOC105371045A0A1W2PR82 267 aa26.12■■□□□ 1.77
ARHGEF1-204ENST00000378152 BICRAQ9NZM4 1560 aa25.91■■□□□ 1.74
ARHGEF1-204ENST00000378152 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
ARHGEF1-204ENST00000378152 CECR2Q9BXF3 1484 aa25.77■■□□□ 1.72
ARHGEF1-204ENST00000378152 TRIM26Q12899 539 aaPredicted RBP25.72■■□□□ 1.71
ARHGEF1-204ENST00000378152 BAZ1AQ9NRL2 1556 aaPredicted RBP25.71■■□□□ 1.71
ARHGEF1-204ENST00000378152 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
ARHGEF1-204ENST00000378152 SMARCA4P51532 1647 aa25.6■■□□□ 1.69
ARHGEF1-204ENST00000378152 WIZO95785 1651 aa25.5■■□□□ 1.67
ARHGEF1-204ENST00000378152 TRIM41Q8WV44 630 aa25.43■■□□□ 1.66
ARHGEF1-204ENST00000378152 PABPN1Q86U42 306 aaKnown RBP eCLIP25.43■■□□□ 1.669e-7■■■□□ 16.5
ARHGEF1-204ENST00000378152 FAM9AQ8IZU1 332 aaPredicted RBP25.42■■□□□ 1.66
ARHGEF1-204ENST00000378152 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
ARHGEF1-204ENST00000378152 EHMT2Q96KQ7 1210 aa25.35■■□□□ 1.65
ARHGEF1-204ENST00000378152 TOP2AP11388 1531 aaKnown RBP25.31■■□□□ 1.64
ARHGEF1-204ENST00000378152 ZEB1P37275 1124 aaPredicted RBP25.26■■□□□ 1.63
ARHGEF1-204ENST00000378152 SMARCA2P51531 1590 aa25.11■■□□□ 1.61
ARHGEF1-204ENST00000378152 ATAD2BQ9ULI0 1458 aa25.07■■□□□ 1.6
ARHGEF1-204ENST00000378152 EIF4G1Q04637 1599 aaKnown RBP25.06■■□□□ 1.6
ARHGEF1-204ENST00000378152 CCDC88BA6NC98 1476 aa24.97■■□□□ 1.59
ARHGEF1-204ENST00000378152 HMGXB3Q12766 1538 aa24.92■■□□□ 1.58
ARHGEF1-204ENST00000378152 BAZ1BQ9UIG0 1483 aaKnown RBP24.9■■□□□ 1.58
ARHGEF1-204ENST00000378152 SCAF1Q9H7N4 1312 aaKnown RBP24.88■■□□□ 1.57
ARHGEF1-204ENST00000378152 NCAPD3P42695 1498 aa24.87■■□□□ 1.57
ARHGEF1-204ENST00000378152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.77■■□□□ 1.56
ARHGEF1-204ENST00000378152 CCER1Q8TC90 406 aaPredicted RBP24.69■■□□□ 1.54
ARHGEF1-204ENST00000378152 PELP1Q8IZL8 1130 aaKnown RBP24.66■■□□□ 1.54
ARHGEF1-204ENST00000378152 CC2D2AQ9P2K1 1620 aa24.62■■□□□ 1.53
ARHGEF1-204ENST00000378152 TTBK1Q5TCY1 1321 aaPredicted RBP24.6■■□□□ 1.53
ARHGEF1-204ENST00000378152 ABCC8Q09428 1581 aa24.45■■□□□ 1.5
ARHGEF1-204ENST00000378152 ACIN1Q9UKV3 1341 aaKnown RBP24.44■■□□□ 1.5
ARHGEF1-204ENST00000378152 NEUROD1Q13562 356 aa24.44■■□□□ 1.5
ARHGEF1-204ENST00000378152 PRDM2Q13029 1718 aa24.41■■□□□ 1.5
ARHGEF1-204ENST00000378152 DIEXFQ68CQ4 756 aaKnown RBP24.4■■□□□ 1.5
ARHGEF1-204ENST00000378152 CFTRP13569 1480 aa24.35■■□□□ 1.49
ARHGEF1-204ENST00000378152 CEP162Q5TB80 1403 aa24.32■■□□□ 1.48
ARHGEF1-204ENST00000378152 WRNQ14191 1432 aaPredicted RBP eCLIP24.29■■□□□ 1.48
ARHGEF1-204ENST00000378152 SOGA1O94964 1423 aa24.28■■□□□ 1.48
ARHGEF1-204ENST00000378152 SYNJ1O43426 1573 aa24.26■■□□□ 1.47
ARHGEF1-204ENST00000378152 GTF3C3Q9Y5Q9 886 aa24.25■■□□□ 1.47
ARHGEF1-204ENST00000378152 UBTFP17480 764 aaKnown RBP24.22■■□□□ 1.47
ARHGEF1-204ENST00000378152 BIVM-ERCC5R4GMW8 1640 aa24.22■■□□□ 1.47
ARHGEF1-204ENST00000378152 CENPBP07199 599 aaPredicted RBP24.22■■□□□ 1.47
ARHGEF1-204ENST00000378152 TOP2BQ02880 1626 aa24.2■■□□□ 1.46
ARHGEF1-204ENST00000378152 TNIKQ9UKE5 1360 aa24.18■■□□□ 1.46
ARHGEF1-204ENST00000378152 RUSC2Q8N2Y8 1516 aa24.17■■□□□ 1.46
ARHGEF1-204ENST00000378152 CSRNP3Q8WYN3 585 aa24.16■■□□□ 1.46
ARHGEF1-204ENST00000378152 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
ARHGEF1-204ENST00000378152 EEA1Q15075 1411 aa24.12■■□□□ 1.45
ARHGEF1-204ENST00000378152 ZNF316A6NFI3 1004 aaPredicted RBP24.06■■□□□ 1.44
ARHGEF1-204ENST00000378152 CUX1P39880 1505 aa24.04■■□□□ 1.44
ARHGEF1-204ENST00000378152 LAMC3Q9Y6N6 1575 aa24.02■■□□□ 1.44
ARHGEF1-204ENST00000378152 YTHDC1Q96MU7 727 aaKnown RBP24.01■■□□□ 1.43
ARHGEF1-204ENST00000378152 HNRNPUL2Q1KMD3 747 aaKnown RBP23.99■■□□□ 1.43
ARHGEF1-204ENST00000378152 GOLGA3Q08378 1498 aa23.98■■□□□ 1.43
ARHGEF1-204ENST00000378152 FANCD2Q9BXW9 1451 aa23.9■■□□□ 1.42
ARHGEF1-204ENST00000378152 KIF21BO75037 1637 aa23.86■■□□□ 1.41
ARHGEF1-204ENST00000378152 MIER1Q8N108 512 aa23.85■■□□□ 1.41
ARHGEF1-204ENST00000378152 NESP48681 1621 aa23.84■■□□□ 1.41
ARHGEF1-204ENST00000378152 RANGAP1P46060 587 aaPredicted RBP23.82■■□□□ 1.4
ARHGEF1-204ENST00000378152 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
ARHGEF1-204ENST00000378152 CLIP1P30622 1438 aa23.78■■□□□ 1.4
ARHGEF1-204ENST00000378152 CEP164Q9UPV0 1460 aa23.78■■□□□ 1.4
ARHGEF1-204ENST00000378152 DNAJC5BQ9UF47 199 aa23.73■■□□□ 1.39
ARHGEF1-204ENST00000378152 APLP2Q06481 763 aa23.73■■□□□ 1.39
ARHGEF1-204ENST00000378152 PDS5BQ9NTI5 1447 aa23.72■■□□□ 1.39
ARHGEF1-204ENST00000378152 TOPBP1Q92547 1522 aa23.7■■□□□ 1.38
ARHGEF1-204ENST00000378152 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
ARHGEF1-204ENST00000378152 KIF21AQ7Z4S6 1674 aa23.69■■□□□ 1.38
ARHGEF1-204ENST00000378152 VPS8Q8N3P4 1428 aa23.68■■□□□ 1.38
ARHGEF1-204ENST00000378152 ERICH3Q5RHP9 1530 aa23.66■■□□□ 1.38
ARHGEF1-204ENST00000378152 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
ARHGEF1-204ENST00000378152 MYT1Q01538 1121 aa23.65■■□□□ 1.38
ARHGEF1-204ENST00000378152 RAPGEF2Q9Y4G8 1499 aa23.64■■□□□ 1.37
ARHGEF1-204ENST00000378152 URB2Q14146 1524 aaKnown RBP23.63■■□□□ 1.37
ARHGEF1-204ENST00000378152 PRXQ9BXM0 1461 aa23.62■■□□□ 1.37
ARHGEF1-204ENST00000378152 WDR97A6NE52 1622 aa23.59■■□□□ 1.37
ARHGEF1-204ENST00000378152 POLA1P09884 1462 aaPredicted RBP23.58■■□□□ 1.36
ARHGEF1-204ENST00000378152 ABCA10Q8WWZ4 1543 aa23.57■■□□□ 1.36
ARHGEF1-204ENST00000378152 CUX2O14529 1486 aa23.53■■□□□ 1.36
ARHGEF1-204ENST00000378152 MRC2Q9UBG0 1479 aa23.46■■□□□ 1.35
ARHGEF1-204ENST00000378152 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
ARHGEF1-204ENST00000378152 IGF1RP08069 1367 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms