RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 PRDM15P57071 1507 aaPredicted RBP31.86■■■□□ 2.69
CBWD3-202ENST00000377342 KDM5DQ9BY66 1539 aa31.81■■■□□ 2.68
CBWD3-202ENST00000377342 KIF3BO15066 747 aa31.8■■■□□ 2.68
CBWD3-202ENST00000377342 VWDEQ8N2E2 1590 aa31.79■■■□□ 2.68
CBWD3-202ENST00000377342 IQGAP3Q86VI3 1631 aa31.79■■■□□ 2.68
CBWD3-202ENST00000377342 HRCP23327 699 aa31.77■■■□□ 2.68
CBWD3-202ENST00000377342 CEP152O94986 1710 aa31.74■■■□□ 2.67
CBWD3-202ENST00000377342 PZPP20742 1482 aa31.72■■■□□ 2.67
CBWD3-202ENST00000377342 FAM135AQ9P2D6 1515 aa31.71■■■□□ 2.67
CBWD3-202ENST00000377342 ZC3H13Q5T200 1668 aaKnown RBP31.71■■■□□ 2.67
CBWD3-202ENST00000377342 ABCC3O15438 1527 aa31.68■■■□□ 2.66
CBWD3-202ENST00000377342 NUP155O75694 1391 aa31.68■■■□□ 2.66
CBWD3-202ENST00000377342 GGT6Q6P531 493 aa31.67■■■□□ 2.66
CBWD3-202ENST00000377342 ARID4BQ4LE39 1312 aaPredicted RBP31.66■■■□□ 2.66
CBWD3-202ENST00000377342 TET3O43151 1660 aa31.65■■■□□ 2.66
CBWD3-202ENST00000377342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.65■■■□□ 2.66
CBWD3-202ENST00000377342 LMTK2Q8IWU2 1503 aa31.65■■■□□ 2.66
CBWD3-202ENST00000377342 TRIM52Q96A61 297 aa31.64■■■□□ 2.66
CBWD3-202ENST00000377342 CLTCQ00610 1675 aaKnown RBP31.64■■■□□ 2.66
CBWD3-202ENST00000377342 FER1L4A9Z1Z3 1794 aa31.63■■■□□ 2.65
CBWD3-202ENST00000377342 CAMSAP1Q5T5Y3 1602 aa31.63■■■□□ 2.65
CBWD3-202ENST00000377342 ACIN1Q9UKV3 1341 aaKnown RBP31.63■■■□□ 2.65
CBWD3-202ENST00000377342 KANK1Q14678 1352 aa31.61■■■□□ 2.65
CBWD3-202ENST00000377342 ADAMTSL3P82987 1691 aa31.61■■■□□ 2.65
CBWD3-202ENST00000377342 MLECQ14165 292 aa31.6■■■□□ 2.65
CBWD3-202ENST00000377342 EFCAB6Q5THR3 1501 aa31.6■■■□□ 2.65
CBWD3-202ENST00000377342 E9PCH4 1651 aa31.58■■■□□ 2.65
CBWD3-202ENST00000377342 DHX57Q6P158 1386 aaKnown RBP31.58■■■□□ 2.65
CBWD3-202ENST00000377342 MADDQ8WXG6 1647 aa31.58■■■□□ 2.65
CBWD3-202ENST00000377342 MROH2AA6NES4 1674 aa31.55■■■□□ 2.64
CBWD3-202ENST00000377342 MPHOSPH9Q99550 1183 aa31.53■■■□□ 2.64
CBWD3-202ENST00000377342 PPP6R1Q9UPN7 881 aa31.52■■■□□ 2.64
CBWD3-202ENST00000377342 WASHC2CQ9Y4E1 1318 aa31.51■■■□□ 2.63
CBWD3-202ENST00000377342 SLC4A1APQ9BWU0 796 aaKnown RBP31.51■■■□□ 2.63
CBWD3-202ENST00000377342 RIMS1Q86UR5 1692 aaKnown RBP31.5■■■□□ 2.63
CBWD3-202ENST00000377342 CNTLNQ9NXG0 1405 aa31.47■■■□□ 2.63
CBWD3-202ENST00000377342 NPATQ14207 1427 aa31.47■■■□□ 2.63
CBWD3-202ENST00000377342 ARHGAP31Q2M1Z3 1444 aa31.45■■■□□ 2.63
CBWD3-202ENST00000377342 C3P01024 1663 aa31.44■■■□□ 2.62
CBWD3-202ENST00000377342 PKD2Q13563 968 aa31.44■■■□□ 2.62
CBWD3-202ENST00000377342 SPHKAPQ2M3C7 1700 aa31.43■■■□□ 2.62
CBWD3-202ENST00000377342 RPRD2Q5VT52 1461 aaKnown RBP31.43■■■□□ 2.62
CBWD3-202ENST00000377342 PREX1Q8TCU6 1659 aa31.42■■■□□ 2.62
CBWD3-202ENST00000377342 CFAP65Q6ZU64 1925 aaKnown RBP31.42■■■□□ 2.62
CBWD3-202ENST00000377342 FOXD1Q16676 465 aa31.41■■■□□ 2.62
CBWD3-202ENST00000377342 ESF1Q9H501 851 aaKnown RBP31.36■■■□□ 2.61
CBWD3-202ENST00000377342 ZMYM3Q14202 1370 aa31.36■■■□□ 2.61
CBWD3-202ENST00000377342 PLA2R1Q13018 1463 aa31.35■■■□□ 2.61
CBWD3-202ENST00000377342 SYNMO15061 1565 aa31.34■■■□□ 2.61
CBWD3-202ENST00000377342 SPATA31D1Q6ZQQ2 1576 aa31.34■■■□□ 2.61
CBWD3-202ENST00000377342 ERVK-7P63135 1459 aa31.34■■■□□ 2.61
CBWD3-202ENST00000377342 TRPM2O94759 1503 aa31.34■■■□□ 2.61
CBWD3-202ENST00000377342 PTPRTO14522 1441 aa31.34■■■□□ 2.61
CBWD3-202ENST00000377342 NOS1P29475 1434 aa31.32■■■□□ 2.6
CBWD3-202ENST00000377342 ANKRD30BQ9BXX2 1392 aa31.32■■■□□ 2.6
CBWD3-202ENST00000377342 CLTCL1P53675 1640 aa31.28■■■□□ 2.6
CBWD3-202ENST00000377342 CCER1Q8TC90 406 aaPredicted RBP31.28■■■□□ 2.6
CBWD3-202ENST00000377342 PTPRMP28827 1452 aa31.27■■■□□ 2.6
CBWD3-202ENST00000377342 UGGT1Q9NYU2 1555 aa31.27■■■□□ 2.6
CBWD3-202ENST00000377342 PIK3C2BO00750 1634 aa31.27■■■□□ 2.6
CBWD3-202ENST00000377342 FBXO31Q5XUX0 539 aaPredicted RBP31.25■■■□□ 2.59
CBWD3-202ENST00000377342 KDM4FA0A1W2PPD8 638 aa31.25■■■□□ 2.59
CBWD3-202ENST00000377342 CEBPAP49715 358 aaPredicted RBP31.23■■■□□ 2.59
CBWD3-202ENST00000377342 CLSPNQ9HAW4 1339 aa31.2■■■□□ 2.59
CBWD3-202ENST00000377342 CCDC144AA2RUR9 1427 aa31.17■■■□□ 2.58
CBWD3-202ENST00000377342 MYO3AQ8NEV4 1616 aa31.16■■■□□ 2.58
CBWD3-202ENST00000377342 TNRQ92752 1358 aa31.14■■■□□ 2.58
CBWD3-202ENST00000377342 KIF1BO60333 1816 aa31.13■■■□□ 2.57
CBWD3-202ENST00000377342 PLPPR3Q6T4P5 718 aa31.12■■■□□ 2.57
CBWD3-202ENST00000377342 SIN3AQ96ST3 1273 aa31.12■■■□□ 2.57
CBWD3-202ENST00000377342 MYO5BQ9ULV0 1848 aa31.1■■■□□ 2.57
CBWD3-202ENST00000377342 ADGRB3O60242 1522 aa31.08■■■□□ 2.57
CBWD3-202ENST00000377342 SETD1BQ9UPS6 1966 aaKnown RBP31.07■■■□□ 2.56
CBWD3-202ENST00000377342 TMEM131LA2VDJ0 1609 aa31.07■■■□□ 2.56
CBWD3-202ENST00000377342 ZNF142P52746 1687 aaPredicted RBP31.07■■■□□ 2.56
CBWD3-202ENST00000377342 NLRP1Q9C000 1473 aa31.06■■■□□ 2.56
CBWD3-202ENST00000377342 NEURL4Q96JN8 1562 aa31.06■■■□□ 2.56
CBWD3-202ENST00000377342 UBR1Q8IWV7 1749 aa31.05■■■□□ 2.56
CBWD3-202ENST00000377342 KDM5AP29375 1690 aaKnown RBP31.05■■■□□ 2.56
CBWD3-202ENST00000377342 SPATA31E1Q6ZUB1 1445 aa31.04■■■□□ 2.56
CBWD3-202ENST00000377342 IDI1Q13907 227 aa31.03■■■□□ 2.56
CBWD3-202ENST00000377342 SLC52A1Q9NWF4 448 aa31.03■■■□□ 2.56
CBWD3-202ENST00000377342 CEP170BQ9Y4F5 1589 aaPredicted RBP31.02■■■□□ 2.56
CBWD3-202ENST00000377342 NEUROD1Q13562 356 aa31■■■□□ 2.55
CBWD3-202ENST00000377342 IFT172Q9UG01 1749 aa30.97■■■□□ 2.55
CBWD3-202ENST00000377342 A2ML1A8K2U0 1454 aa30.97■■■□□ 2.55
CBWD3-202ENST00000377342 PPLO60437 1756 aa30.92■■■□□ 2.54
CBWD3-202ENST00000377342 UHRF1BP1Q6BDS2 1440 aa30.9■■■□□ 2.54
CBWD3-202ENST00000377342 NEXMIFQ5QGS0 1516 aa30.9■■■□□ 2.54
CBWD3-202ENST00000377342 CHGAP10645 457 aaKnown RBP30.87■■■□□ 2.53
CBWD3-202ENST00000377342 TONSLQ96HA7 1378 aa30.87■■■□□ 2.53
CBWD3-202ENST00000377342 RGL3Q3MIN7 710 aa30.84■■■□□ 2.53
CBWD3-202ENST00000377342 L3MBTL2Q969R5 705 aa30.82■■■□□ 2.52
CBWD3-202ENST00000377342 ZFYVE9O95405 1425 aa30.82■■■□□ 2.52
CBWD3-202ENST00000377342 SLIT1O75093 1534 aa30.81■■■□□ 2.52
CBWD3-202ENST00000377342 LMTK3Q96Q04 1460 aa30.81■■■□□ 2.52
CBWD3-202ENST00000377342 ARHGAP23Q9P227 1491 aa30.81■■■□□ 2.52
CBWD3-202ENST00000377342 STAG3Q9UJ98 1225 aa30.81■■■□□ 2.52
CBWD3-202ENST00000377342 MYOM2P54296 1465 aa30.79■■■□□ 2.52
CBWD3-202ENST00000377342 TIMELESSQ9UNS1 1208 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms