RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 LMTK3Q96Q04 1460 aa31.37■■■□□ 2.61
HLA-C-201ENST00000376228 RAB3GAP2Q9H2M9 1393 aa31.37■■■□□ 2.61
HLA-C-201ENST00000376228 KIF3BO15066 747 aa31.36■■■□□ 2.61
HLA-C-201ENST00000376228 CNTLNQ9NXG0 1405 aa31.36■■■□□ 2.61
HLA-C-201ENST00000376228 CLSPNQ9HAW4 1339 aa31.35■■■□□ 2.61
HLA-C-201ENST00000376228 HFM1A2PYH4 1435 aa31.34■■■□□ 2.61
HLA-C-201ENST00000376228 PREX1Q8TCU6 1659 aa31.33■■■□□ 2.61
HLA-C-201ENST00000376228 DHX57Q6P158 1386 aaKnown RBP31.32■■■□□ 2.6
HLA-C-201ENST00000376228 CHIC2Q9UKJ5 165 aa31.3■■■□□ 2.6
HLA-C-201ENST00000376228 EIF2AK4Q9P2K8 1649 aaKnown RBP31.28■■■□□ 2.6
HLA-C-201ENST00000376228 DUOX2Q9NRD8 1548 aa31.28■■■□□ 2.6
HLA-C-201ENST00000376228 ZMYM3Q14202 1370 aa31.27■■■□□ 2.6
HLA-C-201ENST00000376228 KIF15Q9NS87 1388 aa31.27■■■□□ 2.6
HLA-C-201ENST00000376228 RRP7BPQ9NSQ0 103 aa31.27■■■□□ 2.6
HLA-C-201ENST00000376228 GCC2Q8IWJ2 1684 aa31.26■■■□□ 2.59
HLA-C-201ENST00000376228 RNF17Q9BXT8 1623 aaKnown RBP31.26■■■□□ 2.59
HLA-C-201ENST00000376228 NAIPQ13075 1403 aa31.25■■■□□ 2.59
HLA-C-201ENST00000376228 SETD1BQ9UPS6 1966 aaKnown RBP31.25■■■□□ 2.59
HLA-C-201ENST00000376228 HSPA2P54652 639 aa31.24■■■□□ 2.59
HLA-C-201ENST00000376228 ROCK1Q13464 1354 aa31.24■■■□□ 2.59
HLA-C-201ENST00000376228 KDM5DQ9BY66 1539 aa31.22■■■□□ 2.59
HLA-C-201ENST00000376228 PPP6R1Q9UPN7 881 aa31.21■■■□□ 2.59
HLA-C-201ENST00000376228 MROH1Q8NDA8 1641 aa31.2■■■□□ 2.58
HLA-C-201ENST00000376228 ANKRD30AQ9BXX3 1397 aa31.19■■■□□ 2.58
HLA-C-201ENST00000376228 UHRF1BP1Q6BDS2 1440 aa31.18■■■□□ 2.58
HLA-C-201ENST00000376228 WASHC2CQ9Y4E1 1318 aa31.17■■■□□ 2.58
HLA-C-201ENST00000376228 NCOA1Q15788 1441 aa31.16■■■□□ 2.58
HLA-C-201ENST00000376228 ERBINQ96RT1 1412 aa31.16■■■□□ 2.58
HLA-C-201ENST00000376228 CEP152O94986 1710 aa31.16■■■□□ 2.58
HLA-C-201ENST00000376228 ADGRL2O95490 1459 aa31.16■■■□□ 2.58
HLA-C-201ENST00000376228 FAM135AQ9P2D6 1515 aa31.15■■■□□ 2.58
HLA-C-201ENST00000376228 NPATQ14207 1427 aa31.14■■■□□ 2.58
HLA-C-201ENST00000376228 ZC3H13Q5T200 1668 aaKnown RBP31.13■■■□□ 2.57
HLA-C-201ENST00000376228 ACIN1Q9UKV3 1341 aaKnown RBP31.13■■■□□ 2.57
HLA-C-201ENST00000376228 ABCC3O15438 1527 aa31.11■■■□□ 2.57
HLA-C-201ENST00000376228 MYO3AQ8NEV4 1616 aa31.11■■■□□ 2.57
HLA-C-201ENST00000376228 DEPDC5O75140 1603 aa31.09■■■□□ 2.57
HLA-C-201ENST00000376228 PRDM15P57071 1507 aaPredicted RBP31.08■■■□□ 2.57
HLA-C-201ENST00000376228 PZPP20742 1482 aa31.06■■■□□ 2.56
HLA-C-201ENST00000376228 CAMSAP1Q5T5Y3 1602 aa31.06■■■□□ 2.56
HLA-C-201ENST00000376228 FBXO31Q5XUX0 539 aaPredicted RBP31.04■■■□□ 2.56
HLA-C-201ENST00000376228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.04■■■□□ 2.56
HLA-C-201ENST00000376228 CFAP65Q6ZU64 1925 aaKnown RBP31.03■■■□□ 2.56
HLA-C-201ENST00000376228 ZNF142P52746 1687 aaPredicted RBP31.03■■■□□ 2.56
HLA-C-201ENST00000376228 STRCQ7RTU9 1775 aa31.01■■■□□ 2.56
HLA-C-201ENST00000376228 ANKRD50Q9ULJ7 1429 aa30.99■■■□□ 2.55
HLA-C-201ENST00000376228 CEP170BQ9Y4F5 1589 aaPredicted RBP30.99■■■□□ 2.55
HLA-C-201ENST00000376228 TNRQ92752 1358 aa30.96■■■□□ 2.55
HLA-C-201ENST00000376228 KANK1Q14678 1352 aa30.93■■■□□ 2.54
HLA-C-201ENST00000376228 VWDEQ8N2E2 1590 aa30.93■■■□□ 2.54
HLA-C-201ENST00000376228 SPATA31D1Q6ZQQ2 1576 aa30.91■■■□□ 2.54
HLA-C-201ENST00000376228 ERVK-7P63135 1459 aa30.9■■■□□ 2.54
HLA-C-201ENST00000376228 A2ML1A8K2U0 1454 aa30.89■■■□□ 2.54
HLA-C-201ENST00000376228 UNC13BO14795 1591 aa30.87■■■□□ 2.53
HLA-C-201ENST00000376228 LMTK2Q8IWU2 1503 aa30.86■■■□□ 2.53
HLA-C-201ENST00000376228 ARHGAP31Q2M1Z3 1444 aa30.84■■■□□ 2.53
HLA-C-201ENST00000376228 EFCAB6Q5THR3 1501 aa30.82■■■□□ 2.52
HLA-C-201ENST00000376228 NLRP1Q9C000 1473 aa30.82■■■□□ 2.52
HLA-C-201ENST00000376228 UGGT1Q9NYU2 1555 aa30.78■■■□□ 2.52
HLA-C-201ENST00000376228 TET3O43151 1660 aa30.78■■■□□ 2.52
HLA-C-201ENST00000376228 NCKAP5LQ9HCH0 1330 aa30.77■■■□□ 2.52
HLA-C-201ENST00000376228 PLA2R1Q13018 1463 aa30.77■■■□□ 2.52
HLA-C-201ENST00000376228 TIMELESSQ9UNS1 1208 aa30.77■■■□□ 2.52
HLA-C-201ENST00000376228 IQGAP3Q86VI3 1631 aa30.75■■■□□ 2.51
HLA-C-201ENST00000376228 POLR1AO95602 1720 aaPredicted RBP30.74■■■□□ 2.51
HLA-C-201ENST00000376228 TRIM52Q96A61 297 aa30.73■■■□□ 2.51
HLA-C-201ENST00000376228 DMRT2Q9Y5R5 561 aa30.73■■■□□ 2.51
HLA-C-201ENST00000376228 UBR1Q8IWV7 1749 aa30.73■■■□□ 2.51
HLA-C-201ENST00000376228 SYNMO15061 1565 aa30.71■■■□□ 2.51
HLA-C-201ENST00000376228 MPHOSPH9Q99550 1183 aa30.71■■■□□ 2.51
HLA-C-201ENST00000376228 PTPRTO14522 1441 aa30.71■■■□□ 2.51
HLA-C-201ENST00000376228 E9PCH4 1651 aa30.69■■■□□ 2.5
HLA-C-201ENST00000376228 PIK3C2BO00750 1634 aa30.69■■■□□ 2.5
HLA-C-201ENST00000376228 NUP155O75694 1391 aa30.68■■■□□ 2.5
HLA-C-201ENST00000376228 PKD2Q13563 968 aa30.66■■■□□ 2.5
HLA-C-201ENST00000376228 THEMISQ8N1K5 641 aaPredicted RBP30.66■■■□□ 2.5
HLA-C-201ENST00000376228 RPRD2Q5VT52 1461 aaKnown RBP30.65■■■□□ 2.5
HLA-C-201ENST00000376228 NOS1P29475 1434 aa30.65■■■□□ 2.5
HLA-C-201ENST00000376228 NEURL4Q96JN8 1562 aa30.65■■■□□ 2.5
HLA-C-201ENST00000376228 SIN3AQ96ST3 1273 aa30.62■■■□□ 2.49
HLA-C-201ENST00000376228 IDI1Q13907 227 aa30.58■■■□□ 2.49
HLA-C-201ENST00000376228 ANKLE2Q86XL3 938 aa30.57■■■□□ 2.48
HLA-C-201ENST00000376228 SLC4A1APQ9BWU0 796 aaKnown RBP30.56■■■□□ 2.48
HLA-C-201ENST00000376228 MYO5BQ9ULV0 1848 aa30.55■■■□□ 2.48
HLA-C-201ENST00000376228 KDM5AP29375 1690 aaKnown RBP30.55■■■□□ 2.48
HLA-C-201ENST00000376228 STAG3Q9UJ98 1225 aa30.54■■■□□ 2.48
HLA-C-201ENST00000376228 ANKRD30BQ9BXX2 1392 aa30.54■■■□□ 2.48
HLA-C-201ENST00000376228 ADGRB3O60242 1522 aa30.53■■■□□ 2.48
HLA-C-201ENST00000376228 IQGAP1P46940 1657 aa30.52■■■□□ 2.48
HLA-C-201ENST00000376228 NEUROD1Q13562 356 aa30.52■■■□□ 2.48
HLA-C-201ENST00000376228 SLIT1O75093 1534 aa30.51■■■□□ 2.47
HLA-C-201ENST00000376228 LTBP4Q8N2S1 1624 aa30.5■■■□□ 2.47
HLA-C-201ENST00000376228 ILDR1Q86SU0 546 aaPredicted RBP30.5■■■□□ 2.47
HLA-C-201ENST00000376228 NPHP4O75161 1426 aaPredicted RBP30.5■■■□□ 2.47
HLA-C-201ENST00000376228 ARHGAP23Q9P227 1491 aa30.5■■■□□ 2.47
HLA-C-201ENST00000376228 SPHKAPQ2M3C7 1700 aa30.5■■■□□ 2.47
HLA-C-201ENST00000376228 CERKQ8TCT0 537 aa30.49■■■□□ 2.47
HLA-C-201ENST00000376228 ZNF335Q9H4Z2 1342 aaPredicted RBP30.49■■■□□ 2.47
HLA-C-201ENST00000376228 MED14O60244 1454 aa30.48■■■□□ 2.47
HLA-C-201ENST00000376228 SLC52A1Q9NWF4 448 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms