RNA–Protein interactions for RNA: ENST00000375780.6

CLIC1-207, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-207ENST00000375780 NCOA1Q15788 1441 aa18.27■□□□□ 0.51
CLIC1-207ENST00000375780 GGT6Q6P531 493 aa18.26■□□□□ 0.51
CLIC1-207ENST00000375780 CHIC2Q9UKJ5 165 aa18.25■□□□□ 0.51
CLIC1-207ENST00000375780 SETD1BQ9UPS6 1966 aaKnown RBP18.25■□□□□ 0.51
CLIC1-207ENST00000375780 RRP7BPQ9NSQ0 103 aa18.24■□□□□ 0.51
CLIC1-207ENST00000375780 KDM5DQ9BY66 1539 aa18.23■□□□□ 0.51
CLIC1-207ENST00000375780 ZC3H13Q5T200 1668 aaKnown RBP18.23■□□□□ 0.51
CLIC1-207ENST00000375780 ROCK1Q13464 1354 aa18.22■□□□□ 0.51
CLIC1-207ENST00000375780 PTPRKQ15262 1439 aa18.22■□□□□ 0.51
CLIC1-207ENST00000375780 DEPDC5O75140 1603 aa18.2■□□□□ 0.5
CLIC1-207ENST00000375780 MROH1Q8NDA8 1641 aa18.2■□□□□ 0.5
CLIC1-207ENST00000375780 PLPPR3Q6T4P5 718 aa18.2■□□□□ 0.5
CLIC1-207ENST00000375780 PREX1Q8TCU6 1659 aa18.2■□□□□ 0.5
CLIC1-207ENST00000375780 PRDM15P57071 1507 aaPredicted RBP18.19■□□□□ 0.5
CLIC1-207ENST00000375780 ZMYM3Q14202 1370 aa18.19■□□□□ 0.5
CLIC1-207ENST00000375780 CEBPAP49715 358 aaPredicted RBP18.17■□□□□ 0.5
CLIC1-207ENST00000375780 NPATQ14207 1427 aa18.17■□□□□ 0.5
CLIC1-207ENST00000375780 ANKRD50Q9ULJ7 1429 aa18.17■□□□□ 0.5
CLIC1-207ENST00000375780 WASHC2CQ9Y4E1 1318 aa18.17■□□□□ 0.5
CLIC1-207ENST00000375780 CEP152O94986 1710 aa18.16■□□□□ 0.5
CLIC1-207ENST00000375780 ABCC3O15438 1527 aa18.16■□□□□ 0.5
CLIC1-207ENST00000375780 ITGAEP38570 1179 aa18.16■□□□□ 0.5
CLIC1-207ENST00000375780 LMTK3Q96Q04 1460 aa18.14■□□□□ 0.5
CLIC1-207ENST00000375780 PZPP20742 1482 aa18.13■□□□□ 0.49
CLIC1-207ENST00000375780 KANK1Q14678 1352 aa18.13■□□□□ 0.49
CLIC1-207ENST00000375780 CAMSAP1Q5T5Y3 1602 aa18.13■□□□□ 0.49
CLIC1-207ENST00000375780 UHRF1BP1Q6BDS2 1440 aa18.12■□□□□ 0.49
CLIC1-207ENST00000375780 VWDEQ8N2E2 1590 aa18.11■□□□□ 0.49
CLIC1-207ENST00000375780 GCC2Q8IWJ2 1684 aa18.1■□□□□ 0.49
CLIC1-207ENST00000375780 UNC13BO14795 1591 aa18.1■□□□□ 0.49
CLIC1-207ENST00000375780 LMTK2Q8IWU2 1503 aa18.08■□□□□ 0.49
CLIC1-207ENST00000375780 MYO3AQ8NEV4 1616 aa18.08■□□□□ 0.49
CLIC1-207ENST00000375780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.482e-10■□□□□ 10.7
CLIC1-207ENST00000375780 ZNF142P52746 1687 aaPredicted RBP18.07■□□□□ 0.48
CLIC1-207ENST00000375780 ARHGAP31Q2M1Z3 1444 aa18.06■□□□□ 0.48
CLIC1-207ENST00000375780 CFAP65Q6ZU64 1925 aaKnown RBP18.06■□□□□ 0.48
CLIC1-207ENST00000375780 NAIPQ13075 1403 aa18.04■□□□□ 0.48
CLIC1-207ENST00000375780 SPATA31D1Q6ZQQ2 1576 aa18.04■□□□□ 0.48
CLIC1-207ENST00000375780 EFCAB6Q5THR3 1501 aa18.04■□□□□ 0.48
CLIC1-207ENST00000375780 TET3O43151 1660 aa18.04■□□□□ 0.48
CLIC1-207ENST00000375780 HFM1A2PYH4 1435 aa18.04■□□□□ 0.48
CLIC1-207ENST00000375780 TNRQ92752 1358 aa18.03■□□□□ 0.48
CLIC1-207ENST00000375780 CEP170BQ9Y4F5 1589 aaPredicted RBP18.03■□□□□ 0.48
CLIC1-207ENST00000375780 IQGAP3Q86VI3 1631 aa18.03■□□□□ 0.48
CLIC1-207ENST00000375780 ERVK-7P63135 1459 aa18.03■□□□□ 0.48
CLIC1-207ENST00000375780 FBXO31Q5XUX0 539 aaPredicted RBP18.01■□□□□ 0.47
CLIC1-207ENST00000375780 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
CLIC1-207ENST00000375780 NLRP1Q9C000 1473 aa18■□□□□ 0.47
CLIC1-207ENST00000375780 HSPA2P54652 639 aa18■□□□□ 0.47
CLIC1-207ENST00000375780 RPRD2Q5VT52 1461 aaKnown RBP17.99■□□□□ 0.47
CLIC1-207ENST00000375780 NUP155O75694 1391 aa17.96■□□□□ 0.47
CLIC1-207ENST00000375780 E9PCH4 1651 aa17.94■□□□□ 0.46
CLIC1-207ENST00000375780 STRCQ7RTU9 1775 aa17.94■□□□□ 0.46
CLIC1-207ENST00000375780 PLA2R1Q13018 1463 aa17.93■□□□□ 0.46
CLIC1-207ENST00000375780 UGGT1Q9NYU2 1555 aa17.92■□□□□ 0.46
CLIC1-207ENST00000375780 NOS1P29475 1434 aa17.92■□□□□ 0.46
CLIC1-207ENST00000375780 SYNMO15061 1565 aa17.91■□□□□ 0.46
CLIC1-207ENST00000375780 KDM5AP29375 1690 aaKnown RBP17.9■□□□□ 0.46
CLIC1-207ENST00000375780 UBR1Q8IWV7 1749 aa17.9■□□□□ 0.46
CLIC1-207ENST00000375780 ACIN1Q9UKV3 1341 aaKnown RBP17.89■□□□□ 0.45
CLIC1-207ENST00000375780 POLR1AO95602 1720 aaPredicted RBP17.88■□□□□ 0.45
CLIC1-207ENST00000375780 PIK3C2BO00750 1634 aa17.88■□□□□ 0.45
CLIC1-207ENST00000375780 THEMISQ8N1K5 641 aaPredicted RBP17.87■□□□□ 0.45
CLIC1-207ENST00000375780 DMRT2Q9Y5R5 561 aa17.87■□□□□ 0.45
CLIC1-207ENST00000375780 SETD5Q9C0A6 1442 aa17.87■□□□□ 0.45
CLIC1-207ENST00000375780 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
CLIC1-207ENST00000375780 TRIM52Q96A61 297 aa17.86■□□□□ 0.45
CLIC1-207ENST00000375780 SLC52A1Q9NWF4 448 aa17.86■□□□□ 0.45
CLIC1-207ENST00000375780 PKD2Q13563 968 aa17.85■□□□□ 0.45
CLIC1-207ENST00000375780 PTPRTO14522 1441 aa17.84■□□□□ 0.45
CLIC1-207ENST00000375780 ADGRB3O60242 1522 aa17.83■□□□□ 0.45
CLIC1-207ENST00000375780 IDI1Q13907 227 aa17.82■□□□□ 0.44
CLIC1-207ENST00000375780 STAG3Q9UJ98 1225 aa17.81■□□□□ 0.44
CLIC1-207ENST00000375780 SLIT1O75093 1534 aa17.81■□□□□ 0.44
CLIC1-207ENST00000375780 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
CLIC1-207ENST00000375780 RAB3GAP2Q9H2M9 1393 aa17.8■□□□□ 0.44
CLIC1-207ENST00000375780 ANKLE2Q86XL3 938 aa17.79■□□□□ 0.44
CLIC1-207ENST00000375780 MYO5BQ9ULV0 1848 aa17.79■□□□□ 0.44
CLIC1-207ENST00000375780 NEURL4Q96JN8 1562 aa17.79■□□□□ 0.44
CLIC1-207ENST00000375780 NCKAP5LQ9HCH0 1330 aa17.79■□□□□ 0.44
CLIC1-207ENST00000375780 ARHGAP23Q9P227 1491 aa17.79■□□□□ 0.44
CLIC1-207ENST00000375780 TRPM2O94759 1503 aa17.78■□□□□ 0.44
CLIC1-207ENST00000375780 TMEM131LA2VDJ0 1609 aa17.77■□□□□ 0.44
CLIC1-207ENST00000375780 MED14O60244 1454 aa17.77■□□□□ 0.43
CLIC1-207ENST00000375780 TMEM2Q9UHN6 1383 aa17.76■□□□□ 0.43
CLIC1-207ENST00000375780 IQGAP1P46940 1657 aa17.75■□□□□ 0.43
CLIC1-207ENST00000375780 SCAF11Q99590 1463 aaKnown RBP17.75■□□□□ 0.43
CLIC1-207ENST00000375780 HRCP23327 699 aa17.74■□□□□ 0.43
CLIC1-207ENST00000375780 KIF1BO60333 1816 aa17.74■□□□□ 0.43
CLIC1-207ENST00000375780 CLTCL1P53675 1640 aa17.73■□□□□ 0.43
CLIC1-207ENST00000375780 NPHP4O75161 1426 aaPredicted RBP17.73■□□□□ 0.43
CLIC1-207ENST00000375780 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
CLIC1-207ENST00000375780 EID1Q9Y6B2 187 aa17.73■□□□□ 0.43
CLIC1-207ENST00000375780 MPHOSPH9Q99550 1183 aa17.72■□□□□ 0.43
CLIC1-207ENST00000375780 PCGF6Q9BYE7 350 aa17.72■□□□□ 0.43
CLIC1-207ENST00000375780 TXNDC2Q86VQ3 553 aa17.7■□□□□ 0.42
CLIC1-207ENST00000375780 CHGAP10645 457 aaKnown RBP17.7■□□□□ 0.42
CLIC1-207ENST00000375780 ZFYVE9O95405 1425 aa17.68■□□□□ 0.42
CLIC1-207ENST00000375780 LTKP29376 864 aa17.68■□□□□ 0.42
CLIC1-207ENST00000375780 HDGFP51858 240 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms