RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 CHIC2Q9UKJ5 165 aa30.81■■■□□ 2.52
C6orf48-205ENST00000375640 FAM135AQ9P2D6 1515 aa30.81■■■□□ 2.52
C6orf48-205ENST00000375640 DUOX2Q9NRD8 1548 aa30.8■■■□□ 2.52
C6orf48-205ENST00000375640 CLTCQ00610 1675 aaKnown RBP30.8■■■□□ 2.52
C6orf48-205ENST00000375640 ANKRD30AQ9BXX3 1397 aa30.79■■■□□ 2.52
C6orf48-205ENST00000375640 DMRT2Q9Y5R5 561 aa30.79■■■□□ 2.52
C6orf48-205ENST00000375640 KDM5DQ9BY66 1539 aa30.77■■■□□ 2.52
C6orf48-205ENST00000375640 DNMT1P26358 1616 aaKnown RBP30.76■■■□□ 2.52
C6orf48-205ENST00000375640 FBXO31Q5XUX0 539 aaPredicted RBP30.75■■■□□ 2.51
C6orf48-205ENST00000375640 PPARGC1BQ86YN6 1023 aaKnown RBP30.75■■■□□ 2.51
C6orf48-205ENST00000375640 NCOA1Q15788 1441 aa30.73■■■□□ 2.51
C6orf48-205ENST00000375640 ERBINQ96RT1 1412 aa30.73■■■□□ 2.51
C6orf48-205ENST00000375640 PZPP20742 1482 aa30.7■■■□□ 2.51
C6orf48-205ENST00000375640 EIF2AK4Q9P2K8 1649 aaKnown RBP30.69■■■□□ 2.5
C6orf48-205ENST00000375640 TNRQ92752 1358 aa30.67■■■□□ 2.5
C6orf48-205ENST00000375640 RNF17Q9BXT8 1623 aaKnown RBP30.67■■■□□ 2.5
C6orf48-205ENST00000375640 CROCC2H7BZ55 1655 aa30.65■■■□□ 2.5
C6orf48-205ENST00000375640 ADGRL2O95490 1459 aa30.65■■■□□ 2.5
C6orf48-205ENST00000375640 ABCC3O15438 1527 aa30.64■■■□□ 2.5
C6orf48-205ENST00000375640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.64■■■□□ 2.51e-10■□□□□ 10.7
C6orf48-205ENST00000375640 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.62■■■□□ 2.494e-7■□□□□ 10.4
C6orf48-205ENST00000375640 PTPRTO14522 1441 aa30.6■■■□□ 2.49
C6orf48-205ENST00000375640 KANK1Q14678 1352 aa30.6■■■□□ 2.49
C6orf48-205ENST00000375640 ILDR1Q86SU0 546 aaPredicted RBP30.6■■■□□ 2.49
C6orf48-205ENST00000375640 PKD2Q13563 968 aa30.59■■■□□ 2.49
C6orf48-205ENST00000375640 MROH1Q8NDA8 1641 aa30.58■■■□□ 2.49
C6orf48-205ENST00000375640 A2ML1A8K2U0 1454 aa30.58■■■□□ 2.49
C6orf48-205ENST00000375640 NCKAP5LQ9HCH0 1330 aa30.56■■■□□ 2.48
C6orf48-205ENST00000375640 CEP170BQ9Y4F5 1589 aaPredicted RBP30.56■■■□□ 2.48
C6orf48-205ENST00000375640 ANKRD50Q9ULJ7 1429 aa30.56■■■□□ 2.48
C6orf48-205ENST00000375640 CAMSAP1Q5T5Y3 1602 aa30.55■■■□□ 2.48
C6orf48-205ENST00000375640 MYO3AQ8NEV4 1616 aa30.55■■■□□ 2.48
C6orf48-205ENST00000375640 ROCK1Q13464 1354 aa30.54■■■□□ 2.48
C6orf48-205ENST00000375640 THEMISQ8N1K5 641 aaPredicted RBP30.54■■■□□ 2.48
C6orf48-205ENST00000375640 PLA2R1Q13018 1463 aa30.54■■■□□ 2.48
C6orf48-205ENST00000375640 ARHGAP31Q2M1Z3 1444 aa30.54■■■□□ 2.48
C6orf48-205ENST00000375640 STRCQ7RTU9 1775 aa30.54■■■□□ 2.48
C6orf48-205ENST00000375640 PRDM15P57071 1507 aaPredicted RBP30.53■■■□□ 2.48
C6orf48-205ENST00000375640 NLRP1Q9C000 1473 aa30.53■■■□□ 2.48
C6orf48-205ENST00000375640 ZC3H13Q5T200 1668 aaKnown RBP30.52■■■□□ 2.48
C6orf48-205ENST00000375640 ITGAEP38570 1179 aa30.51■■■□□ 2.47
C6orf48-205ENST00000375640 CERKQ8TCT0 537 aa30.49■■■□□ 2.47
C6orf48-205ENST00000375640 FBXO41Q8TF61 875 aa30.49■■■□□ 2.47
C6orf48-205ENST00000375640 ERVK-7P63135 1459 aa30.49■■■□□ 2.47
C6orf48-205ENST00000375640 ZNF142P52746 1687 aaPredicted RBP30.49■■■□□ 2.47
C6orf48-205ENST00000375640 SPATA31D1Q6ZQQ2 1576 aa30.47■■■□□ 2.47
C6orf48-205ENST00000375640 RRBP1Q9P2E9 1410 aaKnown RBP30.45■■■□□ 2.46
C6orf48-205ENST00000375640 DEPDC5O75140 1603 aa30.44■■■□□ 2.46
C6orf48-205ENST00000375640 LMTK2Q8IWU2 1503 aa30.44■■■□□ 2.46
C6orf48-205ENST00000375640 ANKLE2Q86XL3 938 aa30.44■■■□□ 2.46
C6orf48-205ENST00000375640 VWDEQ8N2E2 1590 aa30.41■■■□□ 2.46
C6orf48-205ENST00000375640 UGGT1Q9NYU2 1555 aa30.39■■■□□ 2.46
C6orf48-205ENST00000375640 CEP152O94986 1710 aa30.37■■■□□ 2.45
C6orf48-205ENST00000375640 IDI1Q13907 227 aa30.31■■■□□ 2.44
C6orf48-205ENST00000375640 SLC52A1Q9NWF4 448 aa30.3■■■□□ 2.44
C6orf48-205ENST00000375640 NOS1P29475 1434 aa30.29■■■□□ 2.44
C6orf48-205ENST00000375640 ZNF335Q9H4Z2 1342 aaPredicted RBP30.28■■■□□ 2.44
C6orf48-205ENST00000375640 STAG3Q9UJ98 1225 aa30.28■■■□□ 2.44
C6orf48-205ENST00000375640 NUP155O75694 1391 aa30.28■■■□□ 2.44
C6orf48-205ENST00000375640 EFCAB6Q5THR3 1501 aa30.27■■■□□ 2.44
C6orf48-205ENST00000375640 RPRD2Q5VT52 1461 aaKnown RBP30.26■■■□□ 2.44
C6orf48-205ENST00000375640 LTBP4Q8N2S1 1624 aa30.24■■■□□ 2.43
C6orf48-205ENST00000375640 MED14O60244 1454 aa30.24■■■□□ 2.43
C6orf48-205ENST00000375640 NPHP4O75161 1426 aaPredicted RBP30.23■■■□□ 2.43
C6orf48-205ENST00000375640 TXNDC2Q86VQ3 553 aa30.23■■■□□ 2.43
C6orf48-205ENST00000375640 EID1Q9Y6B2 187 aa30.21■■■□□ 2.43
C6orf48-205ENST00000375640 UNC13BO14795 1591 aa30.2■■■□□ 2.43
C6orf48-205ENST00000375640 LTKP29376 864 aa30.2■■■□□ 2.43
C6orf48-205ENST00000375640 NEURL4Q96JN8 1562 aa30.19■■■□□ 2.42
C6orf48-205ENST00000375640 TMEM2Q9UHN6 1383 aa30.18■■■□□ 2.42
C6orf48-205ENST00000375640 ARHGAP23Q9P227 1491 aa30.17■■■□□ 2.42
C6orf48-205ENST00000375640 CFAP65Q6ZU64 1925 aaKnown RBP30.16■■■□□ 2.42
C6orf48-205ENST00000375640 NAIPQ13075 1403 aa30.16■■■□□ 2.42
C6orf48-205ENST00000375640 SLIT1O75093 1534 aa30.15■■■□□ 2.42
C6orf48-205ENST00000375640 SCAF11Q99590 1463 aaKnown RBP30.14■■■□□ 2.42
C6orf48-205ENST00000375640 SYNMO15061 1565 aa30.14■■■□□ 2.42
C6orf48-205ENST00000375640 TET3O43151 1660 aa30.14■■■□□ 2.41
C6orf48-205ENST00000375640 UBR1Q8IWV7 1749 aa30.13■■■□□ 2.41
C6orf48-205ENST00000375640 IQSEC2Q5JU85 1478 aa30.13■■■□□ 2.41
C6orf48-205ENST00000375640 HFM1A2PYH4 1435 aa30.1■■■□□ 2.41
C6orf48-205ENST00000375640 PIK3C2BO00750 1634 aa30.1■■■□□ 2.41
C6orf48-205ENST00000375640 POLR1AO95602 1720 aaPredicted RBP30.09■■■□□ 2.41
C6orf48-205ENST00000375640 IQGAP3Q86VI3 1631 aa30.09■■■□□ 2.41
C6orf48-205ENST00000375640 HDGFP51858 240 aaKnown RBP30.07■■■□□ 2.4
C6orf48-205ENST00000375640 TRIM52Q96A61 297 aa30.03■■■□□ 2.4
C6orf48-205ENST00000375640 KDM5AP29375 1690 aaKnown RBP30.03■■■□□ 2.4
C6orf48-205ENST00000375640 GCC2Q8IWJ2 1684 aa30.03■■■□□ 2.4
C6orf48-205ENST00000375640 ADGRB3O60242 1522 aa30.02■■■□□ 2.4
C6orf48-205ENST00000375640 CPS1P31327 1500 aa30.02■■■□□ 2.4
C6orf48-205ENST00000375640 CHGAP10645 457 aaKnown RBP30.02■■■□□ 2.4
C6orf48-205ENST00000375640 IQGAP1P46940 1657 aa30.01■■■□□ 2.39
C6orf48-205ENST00000375640 E9PCH4 1651 aa29.98■■■□□ 2.39
C6orf48-205ENST00000375640 UBAP1LF5GYI3 381 aa29.98■■■□□ 2.39
C6orf48-205ENST00000375640 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.97■■■□□ 2.392e-28■■□□□ 14
C6orf48-205ENST00000375640 PPP1R15AO75807 674 aaPredicted RBP29.94■■■□□ 2.38
C6orf48-205ENST00000375640 BCANQ96GW7 911 aa29.94■■■□□ 2.38
C6orf48-205ENST00000375640 RIMS2Q9UQ26 1411 aa29.94■■■□□ 2.38
C6orf48-205ENST00000375640 SLC26A8Q96RN1 970 aa29.93■■■□□ 2.38
C6orf48-205ENST00000375640 SLC4A1APQ9BWU0 796 aaKnown RBP29.93■■■□□ 2.38
C6orf48-205ENST00000375640 ZFYVE9O95405 1425 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms