RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CAMSAP2Q08AD1 1489 aa26.96■■□□□ 1.91
TMEFF1-201ENST00000374879 CRBNQ96SW2 442 aa26.95■■□□□ 1.91
TMEFF1-201ENST00000374879 MAGI1Q96QZ7 1491 aaPredicted RBP26.94■■□□□ 1.9
TMEFF1-201ENST00000374879 CEP170Q5SW79 1584 aa26.93■■□□□ 1.9
TMEFF1-201ENST00000374879 FBLN2P98095 1184 aa26.93■■□□□ 1.9
TMEFF1-201ENST00000374879 ZNF777Q9ULD5 760 aaPredicted RBP26.92■■□□□ 1.9
TMEFF1-201ENST00000374879 BCORL1Q5H9F3 1711 aa26.92■■□□□ 1.9
TMEFF1-201ENST00000374879 POGKQ9P215 609 aa26.92■■□□□ 1.9
TMEFF1-201ENST00000374879 ERCC6Q03468 1493 aa26.92■■□□□ 1.9
TMEFF1-201ENST00000374879 ITSN2Q9NZM3 1697 aa26.91■■□□□ 1.9
TMEFF1-201ENST00000374879 GPATCH8Q9UKJ3 1502 aaKnown RBP26.91■■□□□ 1.9
TMEFF1-201ENST00000374879 CDCA7LQ96GN5 454 aa26.9■■□□□ 1.9
TMEFF1-201ENST00000374879 SYNJ2O15056 1496 aa26.9■■□□□ 1.9
TMEFF1-201ENST00000374879 PZPP20742 1482 aa26.9■■□□□ 1.9
TMEFF1-201ENST00000374879 KIF14Q15058 1648 aa26.89■■□□□ 1.9
TMEFF1-201ENST00000374879 C8orf34Q49A92 452 aa26.89■■□□□ 1.9
TMEFF1-201ENST00000374879 FAM161AQ3B820 660 aa26.87■■□□□ 1.89
TMEFF1-201ENST00000374879 PDE3BQ13370 1112 aa26.86■■□□□ 1.89
TMEFF1-201ENST00000374879 ADGBQ8N7X0 1667 aa26.85■■□□□ 1.89
TMEFF1-201ENST00000374879 BRD4O60885 1362 aaPredicted RBP26.85■■□□□ 1.89
TMEFF1-201ENST00000374879 NAP1L5Q96NT1 182 aaPredicted RBP26.85■■□□□ 1.89
TMEFF1-201ENST00000374879 CARMIL2Q6F5E8 1435 aa26.85■■□□□ 1.89
TMEFF1-201ENST00000374879 HSP90AA2PQ14568 343 aaPredicted RBP26.85■■□□□ 1.89
TMEFF1-201ENST00000374879 ADCY10Q96PN6 1610 aa26.84■■□□□ 1.89
TMEFF1-201ENST00000374879 JPH4Q96JJ6 628 aa26.84■■□□□ 1.89
TMEFF1-201ENST00000374879 USP47Q96K76 1375 aa26.84■■□□□ 1.89
TMEFF1-201ENST00000374879 KDM2BQ8NHM5 1336 aa26.83■■□□□ 1.89
TMEFF1-201ENST00000374879 MYBBP1AQ9BQG0 1328 aaKnown RBP26.82■■□□□ 1.88
TMEFF1-201ENST00000374879 ADGRL2O95490 1459 aa26.81■■□□□ 1.88
TMEFF1-201ENST00000374879 KIF15Q9NS87 1388 aa26.8■■□□□ 1.88
TMEFF1-201ENST00000374879 KTN1Q86UP2 1357 aaKnown RBP26.8■■□□□ 1.88
TMEFF1-201ENST00000374879 C20orf194Q5TEA3 1177 aa26.8■■□□□ 1.88
TMEFF1-201ENST00000374879 CROCC2H7BZ55 1655 aa26.79■■□□□ 1.88
TMEFF1-201ENST00000374879 KIAA1107Q9UPP5 1409 aa26.79■■□□□ 1.88
TMEFF1-201ENST00000374879 ANKRD30AQ9BXX3 1397 aa26.79■■□□□ 1.88
TMEFF1-201ENST00000374879 ARID4BQ4LE39 1312 aaPredicted RBP26.78■■□□□ 1.88
TMEFF1-201ENST00000374879 NUP160Q12769 1436 aa26.78■■□□□ 1.88
TMEFF1-201ENST00000374879 RRP9O43818 475 aaKnown RBP26.78■■□□□ 1.88
TMEFF1-201ENST00000374879 L1TD1Q5T7N2 865 aaKnown RBP26.78■■□□□ 1.88
TMEFF1-201ENST00000374879 HSP90AA1P07900 732 aaKnown RBP26.77■■□□□ 1.88
TMEFF1-201ENST00000374879 PKD2Q13563 968 aa26.77■■□□□ 1.88
TMEFF1-201ENST00000374879 ZNF326Q5BKZ1 582 aaKnown RBP26.77■■□□□ 1.88
TMEFF1-201ENST00000374879 PNNQ9H307 717 aaKnown RBP26.76■■□□□ 1.87
TMEFF1-201ENST00000374879 CENPQQ7L2Z9 268 aaPredicted RBP26.75■■□□□ 1.87
TMEFF1-201ENST00000374879 PLEKHD1A6NEE1 506 aa26.75■■□□□ 1.87
TMEFF1-201ENST00000374879 ANKRD50Q9ULJ7 1429 aa26.74■■□□□ 1.87
TMEFF1-201ENST00000374879 RALBP1Q15311 655 aa26.74■■□□□ 1.87
TMEFF1-201ENST00000374879 MBD5Q9P267 1494 aa26.74■■□□□ 1.87
TMEFF1-201ENST00000374879 ROCK2O75116 1388 aaKnown RBP26.74■■□□□ 1.87
TMEFF1-201ENST00000374879 ARXQ96QS3 562 aa26.7■■□□□ 1.87
TMEFF1-201ENST00000374879 RGS3P49796 1198 aa26.7■■□□□ 1.86
TMEFF1-201ENST00000374879 CLCN1P35523 988 aa26.69■■□□□ 1.86
TMEFF1-201ENST00000374879 CDC42BPAQ5VT25 1732 aa26.69■■□□□ 1.86
TMEFF1-201ENST00000374879 ABCA8O94911 1581 aa26.68■■□□□ 1.86
TMEFF1-201ENST00000374879 ATP10BO94823 1461 aa26.67■■□□□ 1.86
TMEFF1-201ENST00000374879 KDM5CP41229 1560 aa26.67■■□□□ 1.86
TMEFF1-201ENST00000374879 XRCC6P12956 609 aaKnown RBP eCLIP26.67■■□□□ 1.86
TMEFF1-201ENST00000374879 ABCC10Q5T3U5 1492 aa26.67■■□□□ 1.86
TMEFF1-201ENST00000374879 C9orf84Q5VXU9 1444 aa26.66■■□□□ 1.86
TMEFF1-201ENST00000374879 NUP155O75694 1391 aa26.65■■□□□ 1.86
TMEFF1-201ENST00000374879 NLRP13Q86W25 1043 aa26.64■■□□□ 1.85
TMEFF1-201ENST00000374879 SLKQ9H2G2 1235 aaPredicted RBP26.63■■□□□ 1.85
TMEFF1-201ENST00000374879 SHANK2Q9UPX8 1470 aa26.63■■□□□ 1.85
TMEFF1-201ENST00000374879 TSPY4P0CV99 314 aa26.62■■□□□ 1.85
TMEFF1-201ENST00000374879 TSPY10P0CW01 314 aa26.62■■□□□ 1.85
TMEFF1-201ENST00000374879 USP19O94966 1318 aa26.61■■□□□ 1.85
TMEFF1-201ENST00000374879 PANK2Q9BZ23 570 aa26.61■■□□□ 1.85
TMEFF1-201ENST00000374879 PODXL2Q9NZ53 605 aa26.58■■□□□ 1.85
TMEFF1-201ENST00000374879 GOLGA6L3A6NEY3 463 aa26.57■■□□□ 1.84
TMEFF1-201ENST00000374879 HNRNPMP52272 730 aaKnown RBP eCLIP26.57■■□□□ 1.84
TMEFF1-201ENST00000374879 UHRF1BP1Q6BDS2 1440 aa26.55■■□□□ 1.84
TMEFF1-201ENST00000374879 FSD2A1L4K1 749 aa26.54■■□□□ 1.84
TMEFF1-201ENST00000374879 CARD11Q9BXL7 1154 aa26.53■■□□□ 1.84
TMEFF1-201ENST00000374879 ST20-MTHFSA0A0A6YYL1 179 aa26.53■■□□□ 1.84
TMEFF1-201ENST00000374879 PLEKHG5O94827 1062 aa26.53■■□□□ 1.84
TMEFF1-201ENST00000374879 RALGAPBQ86X10 1494 aa26.53■■□□□ 1.84
TMEFF1-201ENST00000374879 PARD3Q8TEW0 1356 aa26.52■■□□□ 1.84
TMEFF1-201ENST00000374879 BECN1Q14457 450 aa26.52■■□□□ 1.84
TMEFF1-201ENST00000374879 KDM5DQ9BY66 1539 aa26.52■■□□□ 1.84
TMEFF1-201ENST00000374879 SEC24BO95487 1268 aa26.52■■□□□ 1.84
TMEFF1-201ENST00000374879 ANTXR1Q9H6X2 564 aa26.52■■□□□ 1.84
TMEFF1-201ENST00000374879 KDM2AQ9Y2K7 1162 aa26.5■■□□□ 1.83
TMEFF1-201ENST00000374879 ARHGEF12Q9NZN5 1544 aa26.5■■□□□ 1.83
TMEFF1-201ENST00000374879 GZF1Q9H116 711 aaPredicted RBP26.5■■□□□ 1.83
TMEFF1-201ENST00000374879 PTPRGP23470 1445 aa26.49■■□□□ 1.83
TMEFF1-201ENST00000374879 ARHGEF5Q12774 1597 aa26.48■■□□□ 1.83
TMEFF1-201ENST00000374879 BLMP54132 1417 aaPredicted RBP26.48■■□□□ 1.83
TMEFF1-201ENST00000374879 E9PCH4 1651 aa26.46■■□□□ 1.83
TMEFF1-201ENST00000374879 CCDC141Q6ZP82 1450 aa26.43■■□□□ 1.82
TMEFF1-201ENST00000374879 SAMD9LQ8IVG5 1584 aa26.43■■□□□ 1.82
TMEFF1-201ENST00000374879 ZMYM4Q5VZL5 1548 aa26.42■■□□□ 1.82
TMEFF1-201ENST00000374879 VIRMAQ69YN4 1812 aaKnown RBP26.41■■□□□ 1.82
TMEFF1-201ENST00000374879 CDC42BPBQ9Y5S2 1711 aa26.4■■□□□ 1.82
TMEFF1-201ENST00000374879 DUSP27Q5VZP5 1158 aa26.4■■□□□ 1.82
TMEFF1-201ENST00000374879 ERBB4Q15303 1308 aa26.4■■□□□ 1.82
TMEFF1-201ENST00000374879 ESPNB1AK53 854 aa26.39■■□□□ 1.82
TMEFF1-201ENST00000374879 CC2D1BQ5T0F9 858 aaKnown RBP26.39■■□□□ 1.81
TMEFF1-201ENST00000374879 PREX2Q70Z35 1606 aa26.39■■□□□ 1.81
TMEFF1-201ENST00000374879 PER1O15534 1290 aaPredicted RBP26.38■■□□□ 1.81
TMEFF1-201ENST00000374879 FAM135AQ9P2D6 1515 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms