RNA–Protein interactions for RNA: ENST00000374455.2

RASGEF1A-201, Transcript of RasGEF domain family member 1A, humanhuman

TSL 5

Gene RASGEF1A, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1A-201ENST00000374455 LOC105371045A0A1W2PR82 267 aa17.42■□□□□ 0.38
RASGEF1A-201ENST00000374455 INO80Q9ULG1 1556 aaPredicted RBP17.41■□□□□ 0.38
RASGEF1A-201ENST00000374455 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.38
RASGEF1A-201ENST00000374455 POTEAQ6S8J7 498 aa17.41■□□□□ 0.38
RASGEF1A-201ENST00000374455 RNF17Q9BXT8 1623 aaKnown RBP17.4■□□□□ 0.38
RASGEF1A-201ENST00000374455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.4■□□□□ 0.38
RASGEF1A-201ENST00000374455 LRRC7Q96NW7 1537 aa17.38■□□□□ 0.37
RASGEF1A-201ENST00000374455 FBXO31Q5XUX0 539 aaPredicted RBP17.38■□□□□ 0.37
RASGEF1A-201ENST00000374455 NPHP4O75161 1426 aaPredicted RBP17.37■□□□□ 0.37
RASGEF1A-201ENST00000374455 IQGAP1P46940 1657 aa17.36■□□□□ 0.37
RASGEF1A-201ENST00000374455 ANKLE2Q86XL3 938 aa17.36■□□□□ 0.37
RASGEF1A-201ENST00000374455 TNRQ92752 1358 aa17.36■□□□□ 0.37
RASGEF1A-201ENST00000374455 ADGBQ8N7X0 1667 aa17.36■□□□□ 0.37
RASGEF1A-201ENST00000374455 DEPDC5O75140 1603 aa17.35■□□□□ 0.37
RASGEF1A-201ENST00000374455 MED14O60244 1454 aa17.34■□□□□ 0.37
RASGEF1A-201ENST00000374455 SYNMO15061 1565 aa17.33■□□□□ 0.37
RASGEF1A-201ENST00000374455 VPS8Q8N3P4 1428 aa17.32■□□□□ 0.36
RASGEF1A-201ENST00000374455 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
RASGEF1A-201ENST00000374455 UGGT1Q9NYU2 1555 aa17.31■□□□□ 0.36
RASGEF1A-201ENST00000374455 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
RASGEF1A-201ENST00000374455 EHBP1L1Q8N3D4 1523 aa17.29■□□□□ 0.36
RASGEF1A-201ENST00000374455 PZPP20742 1482 aa17.29■□□□□ 0.36
RASGEF1A-201ENST00000374455 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
RASGEF1A-201ENST00000374455 THEMISQ8N1K5 641 aaPredicted RBP17.28■□□□□ 0.36
RASGEF1A-201ENST00000374455 KIAA1107Q9UPP5 1409 aa17.27■□□□□ 0.35
RASGEF1A-201ENST00000374455 FAM135AQ9P2D6 1515 aa17.26■□□□□ 0.35
RASGEF1A-201ENST00000374455 ZC3H13Q5T200 1668 aaKnown RBP17.26■□□□□ 0.35
RASGEF1A-201ENST00000374455 TIAM1Q13009 1591 aa17.26■□□□□ 0.35
RASGEF1A-201ENST00000374455 KDM5DQ9BY66 1539 aa17.25■□□□□ 0.35
RASGEF1A-201ENST00000374455 MIA2Q96PC5 1412 aa17.24■□□□□ 0.35
RASGEF1A-201ENST00000374455 CCNB3Q8WWL7 1395 aa17.24■□□□□ 0.35
RASGEF1A-201ENST00000374455 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
RASGEF1A-201ENST00000374455 NLRP1Q9C000 1473 aa17.24■□□□□ 0.35
RASGEF1A-201ENST00000374455 CFDP1Q9UEE9 299 aaPredicted RBP17.22■□□□□ 0.35
RASGEF1A-201ENST00000374455 KIF3BO15066 747 aa17.21■□□□□ 0.35
RASGEF1A-201ENST00000374455 SRCAPQ6ZRS2 3230 aa17.21■□□□□ 0.35
RASGEF1A-201ENST00000374455 MAP3K1Q13233 1512 aa17.21■□□□□ 0.34
RASGEF1A-201ENST00000374455 DHX29Q7Z478 1369 aaKnown RBP17.2■□□□□ 0.34
RASGEF1A-201ENST00000374455 ZNF644Q9H582 1327 aaPredicted RBP17.2■□□□□ 0.34
RASGEF1A-201ENST00000374455 ROBO1Q9Y6N7 1651 aa17.19■□□□□ 0.34
RASGEF1A-201ENST00000374455 CFAP65Q6ZU64 1925 aaKnown RBP17.19■□□□□ 0.34
RASGEF1A-201ENST00000374455 WASHC2CQ9Y4E1 1318 aa17.19■□□□□ 0.34
RASGEF1A-201ENST00000374455 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.348e-7■■□□□ 11.6
RASGEF1A-201ENST00000374455 FAM135BQ49AJ0 1406 aa17.18■□□□□ 0.34
RASGEF1A-201ENST00000374455 APLP2Q06481 763 aa17.16■□□□□ 0.34
RASGEF1A-201ENST00000374455 MBD5Q9P267 1494 aa17.16■□□□□ 0.34
RASGEF1A-201ENST00000374455 UBR1Q8IWV7 1749 aa17.14■□□□□ 0.33
RASGEF1A-201ENST00000374455 RTEL1-TNFRSF6BF6WH68 1400 aa17.13■□□□□ 0.33
RASGEF1A-201ENST00000374455 LRRC9Q6ZRR7 1453 aa17.13■□□□□ 0.33
RASGEF1A-201ENST00000374455 SCAF11Q99590 1463 aaKnown RBP17.12■□□□□ 0.33
RASGEF1A-201ENST00000374455 PHLPP1O60346 1717 aa17.1■□□□□ 0.33
RASGEF1A-201ENST00000374455 LTKP29376 864 aa17.1■□□□□ 0.33
RASGEF1A-201ENST00000374455 NCOA2Q15596 1464 aa17.1■□□□□ 0.33
RASGEF1A-201ENST00000374455 TRIM52Q96A61 297 aa17.09■□□□□ 0.33
RASGEF1A-201ENST00000374455 RBM33Q96EV2 1170 aaKnown RBP17.08■□□□□ 0.32
RASGEF1A-201ENST00000374455 ERVK-7P63135 1459 aa17.07■□□□□ 0.32
RASGEF1A-201ENST00000374455 TMEM94Q12767 1356 aa17.07■□□□□ 0.32
RASGEF1A-201ENST00000374455 ABCC3O15438 1527 aa17.06■□□□□ 0.32
RASGEF1A-201ENST00000374455 TXNDC2Q86VQ3 553 aa17.05■□□□□ 0.32
RASGEF1A-201ENST00000374455 CEP152O94986 1710 aa17.04■□□□□ 0.32
RASGEF1A-201ENST00000374455 SLIT1O75093 1534 aa17.04■□□□□ 0.32
RASGEF1A-201ENST00000374455 ARHGAP23Q9P227 1491 aa17.04■□□□□ 0.32
RASGEF1A-201ENST00000374455 LRP6O75581 1613 aa17.03■□□□□ 0.32
RASGEF1A-201ENST00000374455 CCDC141Q6ZP82 1450 aa17.03■□□□□ 0.32
RASGEF1A-201ENST00000374455 JCADQ9P266 1359 aa17.02■□□□□ 0.32
RASGEF1A-201ENST00000374455 CAMSAP2Q08AD1 1489 aa17.02■□□□□ 0.32
RASGEF1A-201ENST00000374455 COL16A1Q07092 1604 aaPredicted RBP17■□□□□ 0.31
RASGEF1A-201ENST00000374455 KANK4Q5T7N3 995 aaPredicted RBP17■□□□□ 0.31
RASGEF1A-201ENST00000374455 PROSER2Q86WR7 435 aaPredicted RBP16.99■□□□□ 0.31
RASGEF1A-201ENST00000374455 MYOM3Q5VTT5 1437 aa16.98■□□□□ 0.31
RASGEF1A-201ENST00000374455 RSPH4AQ5TD94 716 aa16.98■□□□□ 0.31
RASGEF1A-201ENST00000374455 MROH1Q8NDA8 1641 aa16.98■□□□□ 0.31
RASGEF1A-201ENST00000374455 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
RASGEF1A-201ENST00000374455 ZNF772Q68DY9 489 aaPredicted RBP16.97■□□□□ 0.31
RASGEF1A-201ENST00000374455 PIK3C2BO00750 1634 aa16.96■□□□□ 0.31
RASGEF1A-201ENST00000374455 KCNA6P17658 529 aa16.96■□□□□ 0.31
RASGEF1A-201ENST00000374455 EID1Q9Y6B2 187 aa16.96■□□□□ 0.31
RASGEF1A-201ENST00000374455 ARHGEF5Q12774 1597 aa16.95■□□□□ 0.3
RASGEF1A-201ENST00000374455 SLAIN2Q9P270 581 aa16.95■□□□□ 0.3
RASGEF1A-201ENST00000374455 PRDM15P57071 1507 aaPredicted RBP16.95■□□□□ 0.3
RASGEF1A-201ENST00000374455 TSPY4P0CV99 314 aa16.94■□□□□ 0.3
RASGEF1A-201ENST00000374455 TSPY10P0CW01 314 aa16.94■□□□□ 0.3
RASGEF1A-201ENST00000374455 RXRBP28702 533 aa16.94■□□□□ 0.3
RASGEF1A-201ENST00000374455 SLC26A8Q96RN1 970 aa16.94■□□□□ 0.3
RASGEF1A-201ENST00000374455 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
RASGEF1A-201ENST00000374455 TET3O43151 1660 aa16.92■□□□□ 0.3
RASGEF1A-201ENST00000374455 SHPRHQ149N8 1683 aa16.91■□□□□ 0.3
RASGEF1A-201ENST00000374455 MSH6P52701 1360 aa16.91■□□□□ 0.3
RASGEF1A-201ENST00000374455 TMEM2Q9UHN6 1383 aa16.91■□□□□ 0.3
RASGEF1A-201ENST00000374455 NWD1Q149M9 1564 aa16.91■□□□□ 0.3
RASGEF1A-201ENST00000374455 EIF2AK4Q9P2K8 1649 aaKnown RBP16.91■□□□□ 0.3
RASGEF1A-201ENST00000374455 SPATA31A6Q5VVP1 1343 aa16.91■□□□□ 0.3
RASGEF1A-201ENST00000374455 CROCC2H7BZ55 1655 aa16.9■□□□□ 0.3
RASGEF1A-201ENST00000374455 NKTRP30414 1462 aaKnown RBP16.89■□□□□ 0.29
RASGEF1A-201ENST00000374455 CDK12Q9NYV4 1490 aaPredicted RBP16.89■□□□□ 0.29
RASGEF1A-201ENST00000374455 FGD6Q6ZV73 1430 aa16.88■□□□□ 0.29
RASGEF1A-201ENST00000374455 KDM5AP29375 1690 aaKnown RBP16.88■□□□□ 0.29
RASGEF1A-201ENST00000374455 MAST1Q9Y2H9 1570 aa16.87■□□□□ 0.29
RASGEF1A-201ENST00000374455 EFCAB6Q5THR3 1501 aa16.86■□□□□ 0.29
RASGEF1A-201ENST00000374455 CHD2O14647 1828 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms