RNA–Protein interactions for RNA: ENST00000374455.2

RASGEF1A-201, Transcript of RasGEF domain family member 1A, humanhuman

TSL 5

Gene RASGEF1A, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1A-201ENST00000374455 NISCHQ9Y2I1 1504 aa27.09■■□□□ 1.93
RASGEF1A-201ENST00000374455 ABCC9O60706 1549 aa25.43■■□□□ 1.66
RASGEF1A-201ENST00000374455 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.54
RASGEF1A-201ENST00000374455 DNAJC5BQ9UF47 199 aa24.57■■□□□ 1.52
RASGEF1A-201ENST00000374455 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
RASGEF1A-201ENST00000374455 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.36
RASGEF1A-201ENST00000374455 NACADO15069 1562 aa23.44■■□□□ 1.34
RASGEF1A-201ENST00000374455 UNC13AQ9UPW8 1703 aa23.43■■□□□ 1.34
RASGEF1A-201ENST00000374455 DCAF8L2P0C7V8 631 aa23.24■■□□□ 1.31
RASGEF1A-201ENST00000374455 BICRAQ9NZM4 1560 aa23.22■■□□□ 1.31
RASGEF1A-201ENST00000374455 DNAJC5Q9H3Z4 198 aa23.02■■□□□ 1.28
RASGEF1A-201ENST00000374455 CECR2Q9BXF3 1484 aa22.95■■□□□ 1.26
RASGEF1A-201ENST00000374455 CC2D2AQ9P2K1 1620 aa22.94■■□□□ 1.26
RASGEF1A-201ENST00000374455 MYO15BQ96JP2 1530 aa22.82■■□□□ 1.24
RASGEF1A-201ENST00000374455 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
RASGEF1A-201ENST00000374455 SHROOM4Q9ULL8 1493 aa22.66■■□□□ 1.22
RASGEF1A-201ENST00000374455 SCRIBQ14160 1630 aa22.48■■□□□ 1.19
RASGEF1A-201ENST00000374455 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
RASGEF1A-201ENST00000374455 DCAF1Q9Y4B6 1507 aa22.26■■□□□ 1.15
RASGEF1A-201ENST00000374455 CUX2O14529 1486 aa22.15■■□□□ 1.14
RASGEF1A-201ENST00000374455 ERCC6Q03468 1493 aa21.96■■□□□ 1.11
RASGEF1A-201ENST00000374455 TRIM41Q8WV44 630 aa21.77■■□□□ 1.08
RASGEF1A-201ENST00000374455 NESP48681 1621 aa21.66■■□□□ 1.06
RASGEF1A-201ENST00000374455 NCAPD3P42695 1498 aa21.64■■□□□ 1.06
RASGEF1A-201ENST00000374455 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
RASGEF1A-201ENST00000374455 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
RASGEF1A-201ENST00000374455 HMGXB3Q12766 1538 aa21.43■■□□□ 1.02
RASGEF1A-201ENST00000374455 SMARCA2P51531 1590 aa21.42■■□□□ 1.02
RASGEF1A-201ENST00000374455 KIF21AQ7Z4S6 1674 aa21.38■■□□□ 1.01
RASGEF1A-201ENST00000374455 SMARCA4P51532 1647 aa21.33■■□□□ 1
RASGEF1A-201ENST00000374455 LAMC3Q9Y6N6 1575 aa21.31■■□□□ 1
RASGEF1A-201ENST00000374455 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
RASGEF1A-201ENST00000374455 PDS5BQ9NTI5 1447 aa21.17■□□□□ 0.98
RASGEF1A-201ENST00000374455 BAZ1AQ9NRL2 1556 aaPredicted RBP21.16■□□□□ 0.98
RASGEF1A-201ENST00000374455 MRC2Q9UBG0 1479 aa21.07■□□□□ 0.96
RASGEF1A-201ENST00000374455 PEG3Q9GZU2 1588 aa21.07■□□□□ 0.96
RASGEF1A-201ENST00000374455 WDR62O43379 1518 aa21.05■□□□□ 0.96
RASGEF1A-201ENST00000374455 OSCARQ8IYS5 282 aa21.01■□□□□ 0.95
RASGEF1A-201ENST00000374455 CADPSQ9ULU8 1353 aa20.96■□□□□ 0.95
RASGEF1A-201ENST00000374455 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
RASGEF1A-201ENST00000374455 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
RASGEF1A-201ENST00000374455 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
RASGEF1A-201ENST00000374455 MROH2BQ7Z745 1585 aa20.92■□□□□ 0.94
RASGEF1A-201ENST00000374455 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.93
RASGEF1A-201ENST00000374455 FANCD2Q9BXW9 1451 aa20.76■□□□□ 0.91
RASGEF1A-201ENST00000374455 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
RASGEF1A-201ENST00000374455 WIZO95785 1651 aa20.67■□□□□ 0.9
RASGEF1A-201ENST00000374455 URB2Q14146 1524 aaKnown RBP20.67■□□□□ 0.9
RASGEF1A-201ENST00000374455 TRHP20396 242 aaPredicted RBP20.64■□□□□ 0.89
RASGEF1A-201ENST00000374455 CYB5RLQ6IPT4 315 aa20.62■□□□□ 0.89
RASGEF1A-201ENST00000374455 AEBP2Q6ZN18 517 aaPredicted RBP20.57■□□□□ 0.88
RASGEF1A-201ENST00000374455 CFTRP13569 1480 aa20.56■□□□□ 0.88
RASGEF1A-201ENST00000374455 ZNF608Q9ULD9 1512 aaPredicted RBP20.55■□□□□ 0.88
RASGEF1A-201ENST00000374455 ARAP1Q96P48 1450 aa20.5■□□□□ 0.87
RASGEF1A-201ENST00000374455 CHD1O14646 1710 aa20.44■□□□□ 0.86
RASGEF1A-201ENST00000374455 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
RASGEF1A-201ENST00000374455 EIF4G3O43432 1585 aaKnown RBP20.4■□□□□ 0.86
RASGEF1A-201ENST00000374455 PRDM2Q13029 1718 aa20.39■□□□□ 0.86
RASGEF1A-201ENST00000374455 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
RASGEF1A-201ENST00000374455 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
RASGEF1A-201ENST00000374455 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.84
RASGEF1A-201ENST00000374455 FBLN2P98095 1184 aa20.26■□□□□ 0.83
RASGEF1A-201ENST00000374455 AQRO60306 1485 aaKnown RBP eCLIP20.25■□□□□ 0.835e-7■■■■□ 19.6
RASGEF1A-201ENST00000374455 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
RASGEF1A-201ENST00000374455 DNMBPQ6XZF7 1577 aa20.14■□□□□ 0.81
RASGEF1A-201ENST00000374455 CLASP1Q7Z460 1538 aa20.12■□□□□ 0.81
RASGEF1A-201ENST00000374455 ABCC8Q09428 1581 aa20.1■□□□□ 0.81
RASGEF1A-201ENST00000374455 CCDC88BA6NC98 1476 aa20.07■□□□□ 0.8
RASGEF1A-201ENST00000374455 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
RASGEF1A-201ENST00000374455 SNAPC4Q5SXM2 1469 aa20.02■□□□□ 0.8
RASGEF1A-201ENST00000374455 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
RASGEF1A-201ENST00000374455 SYNJ1O43426 1573 aa20■□□□□ 0.79
RASGEF1A-201ENST00000374455 TDRD9Q8NDG6 1382 aaKnown RBP20■□□□□ 0.79
RASGEF1A-201ENST00000374455 GAPVD1Q14C86 1478 aa19.94■□□□□ 0.78
RASGEF1A-201ENST00000374455 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
RASGEF1A-201ENST00000374455 SOGA1O94964 1423 aa19.91■□□□□ 0.78
RASGEF1A-201ENST00000374455 MAGI1Q96QZ7 1491 aaPredicted RBP19.87■□□□□ 0.77
RASGEF1A-201ENST00000374455 ILDR1Q86SU0 546 aaPredicted RBP19.84■□□□□ 0.77
RASGEF1A-201ENST00000374455 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
RASGEF1A-201ENST00000374455 SYNJ2O15056 1496 aa19.83■□□□□ 0.76
RASGEF1A-201ENST00000374455 ERCC6L2Q5T890 1561 aa19.82■□□□□ 0.76
RASGEF1A-201ENST00000374455 KIF13AQ9H1H9 1805 aa19.81■□□□□ 0.76
RASGEF1A-201ENST00000374455 GRIN2BQ13224 1484 aa19.8■□□□□ 0.76
RASGEF1A-201ENST00000374455 FGD5Q6ZNL6 1462 aa19.8■□□□□ 0.76
RASGEF1A-201ENST00000374455 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
RASGEF1A-201ENST00000374455 CUX1P39880 1505 aa19.69■□□□□ 0.74
RASGEF1A-201ENST00000374455 CEP170Q5SW79 1584 aa19.66■□□□□ 0.74
RASGEF1A-201ENST00000374455 KDM4FA0A1W2PPD8 638 aa19.65■□□□□ 0.74
RASGEF1A-201ENST00000374455 ABCA5Q8WWZ7 1642 aa19.58■□□□□ 0.73
RASGEF1A-201ENST00000374455 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
RASGEF1A-201ENST00000374455 SHROOM2Q13796 1616 aa19.56■□□□□ 0.72
RASGEF1A-201ENST00000374455 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
RASGEF1A-201ENST00000374455 NUP160Q12769 1436 aa19.52■□□□□ 0.72
RASGEF1A-201ENST00000374455 FAM69CQ0P6D2 419 aa19.52■□□□□ 0.72
RASGEF1A-201ENST00000374455 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
RASGEF1A-201ENST00000374455 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
RASGEF1A-201ENST00000374455 ABCC10Q5T3U5 1492 aa19.49■□□□□ 0.71
RASGEF1A-201ENST00000374455 KDM6BO15054 1643 aa19.49■□□□□ 0.71
RASGEF1A-201ENST00000374455 TSPOAP1O95153 1857 aa19.48■□□□□ 0.71
RASGEF1A-201ENST00000374455 DIP2BQ9P265 1576 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms