RNA–Protein interactions for RNA: ENST00000374000.8

PHF20-202, Transcript of PHD finger protein 20, humanhuman

TSL 1 (best)

Gene PHF20, Length 1,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-202ENST00000374000 SHANK2Q9UPX8 1470 aa18.59■□□□□ 0.57
PHF20-202ENST00000374000 MTUS2Q5JR59 1369 aa18.59■□□□□ 0.57
PHF20-202ENST00000374000 CPS1P31327 1500 aa18.59■□□□□ 0.57
PHF20-202ENST00000374000 TIAM1Q13009 1591 aa18.59■□□□□ 0.57
PHF20-202ENST00000374000 DHX29Q7Z478 1369 aaKnown RBP18.59■□□□□ 0.57
PHF20-202ENST00000374000 TOM1O60784 492 aa18.58■□□□□ 0.56
PHF20-202ENST00000374000 POLR1AO95602 1720 aaPredicted RBP18.57■□□□□ 0.56
PHF20-202ENST00000374000 RTEL1-TNFRSF6BF6WH68 1400 aa18.57■□□□□ 0.56
PHF20-202ENST00000374000 KIF3BO15066 747 aa18.56■□□□□ 0.56
PHF20-202ENST00000374000 ALKQ9UM73 1620 aa18.56■□□□□ 0.56
PHF20-202ENST00000374000 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.56
PHF20-202ENST00000374000 PZPP20742 1482 aa18.55■□□□□ 0.56
PHF20-202ENST00000374000 VWDEQ8N2E2 1590 aa18.55■□□□□ 0.56
PHF20-202ENST00000374000 KDM5DQ9BY66 1539 aa18.53■□□□□ 0.56
PHF20-202ENST00000374000 ANKLE2Q86XL3 938 aa18.52■□□□□ 0.56
PHF20-202ENST00000374000 EHBP1L1Q8N3D4 1523 aa18.5■□□□□ 0.55
PHF20-202ENST00000374000 NPHP4O75161 1426 aaPredicted RBP18.5■□□□□ 0.55
PHF20-202ENST00000374000 MIA2Q96PC5 1412 aa18.5■□□□□ 0.55
PHF20-202ENST00000374000 CEP162Q5TB80 1403 aa18.5■□□□□ 0.55
PHF20-202ENST00000374000 WASHC2CQ9Y4E1 1318 aa18.49■□□□□ 0.55
PHF20-202ENST00000374000 THEMISQ8N1K5 641 aaPredicted RBP18.49■□□□□ 0.55
PHF20-202ENST00000374000 MED14O60244 1454 aa18.49■□□□□ 0.55
PHF20-202ENST00000374000 FAM135AQ9P2D6 1515 aa18.48■□□□□ 0.55
PHF20-202ENST00000374000 CCDC141Q6ZP82 1450 aa18.48■□□□□ 0.55
PHF20-202ENST00000374000 UGGT1Q9NYU2 1555 aa18.48■□□□□ 0.55
PHF20-202ENST00000374000 NLRP1Q9C000 1473 aa18.47■□□□□ 0.55
PHF20-202ENST00000374000 DEPDC5O75140 1603 aa18.47■□□□□ 0.55
PHF20-202ENST00000374000 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
PHF20-202ENST00000374000 CAMSAP2Q08AD1 1489 aa18.46■□□□□ 0.55
PHF20-202ENST00000374000 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
PHF20-202ENST00000374000 STRCP1A6NGW2 1772 aa18.44■□□□□ 0.54
PHF20-202ENST00000374000 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
PHF20-202ENST00000374000 IQGAP1P46940 1657 aa18.43■□□□□ 0.54
PHF20-202ENST00000374000 NCOA2Q15596 1464 aa18.42■□□□□ 0.54
PHF20-202ENST00000374000 RSPH4AQ5TD94 716 aa18.39■□□□□ 0.54
PHF20-202ENST00000374000 ABCC3O15438 1527 aa18.38■□□□□ 0.53
PHF20-202ENST00000374000 ARHGEF5Q12774 1597 aa18.38■□□□□ 0.53
PHF20-202ENST00000374000 RNF17Q9BXT8 1623 aaKnown RBP18.37■□□□□ 0.53
PHF20-202ENST00000374000 ERVK-7P63135 1459 aa18.36■□□□□ 0.53
PHF20-202ENST00000374000 RGS17Q9UGC6 210 aaPredicted RBP18.36■□□□□ 0.53
PHF20-202ENST00000374000 SYNMO15061 1565 aa18.35■□□□□ 0.53
PHF20-202ENST00000374000 ZC3H13Q5T200 1668 aaKnown RBP18.35■□□□□ 0.53
PHF20-202ENST00000374000 TSPY4P0CV99 314 aa18.35■□□□□ 0.53
PHF20-202ENST00000374000 TSPY10P0CW01 314 aa18.35■□□□□ 0.53
PHF20-202ENST00000374000 MROH1Q8NDA8 1641 aa18.32■□□□□ 0.52
PHF20-202ENST00000374000 LTKP29376 864 aa18.31■□□□□ 0.52
PHF20-202ENST00000374000 UBR1Q8IWV7 1749 aa18.31■□□□□ 0.52
PHF20-202ENST00000374000 SCAF11Q99590 1463 aaKnown RBP18.3■□□□□ 0.52
PHF20-202ENST00000374000 MAST1Q9Y2H9 1570 aa18.3■□□□□ 0.52
PHF20-202ENST00000374000 ARHGAP23Q9P227 1491 aa18.28■□□□□ 0.52
PHF20-202ENST00000374000 CEP152O94986 1710 aa18.28■□□□□ 0.52
PHF20-202ENST00000374000 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.52
PHF20-202ENST00000374000 XIRP1Q702N8 1843 aaKnown RBP18.27■□□□□ 0.52
PHF20-202ENST00000374000 TXNDC2Q86VQ3 553 aa18.26■□□□□ 0.51
PHF20-202ENST00000374000 SLIT1O75093 1534 aa18.26■□□□□ 0.51
PHF20-202ENST00000374000 CFAP65Q6ZU64 1925 aaKnown RBP18.25■□□□□ 0.51
PHF20-202ENST00000374000 POTEAQ6S8J7 498 aa18.23■□□□□ 0.51
PHF20-202ENST00000374000 LRRC9Q6ZRR7 1453 aa18.23■□□□□ 0.51
PHF20-202ENST00000374000 FAM135BQ49AJ0 1406 aa18.21■□□□□ 0.51
PHF20-202ENST00000374000 ARHGAP31Q2M1Z3 1444 aa18.2■□□□□ 0.5
PHF20-202ENST00000374000 DUOX2Q9NRD8 1548 aa18.2■□□□□ 0.5
PHF20-202ENST00000374000 KANK4Q5T7N3 995 aaPredicted RBP18.19■□□□□ 0.5
PHF20-202ENST00000374000 EID1Q9Y6B2 187 aa18.19■□□□□ 0.5
PHF20-202ENST00000374000 TMEM94Q12767 1356 aa18.18■□□□□ 0.5
PHF20-202ENST00000374000 PIK3C2BO00750 1634 aa18.18■□□□□ 0.5
PHF20-202ENST00000374000 TMEM2Q9UHN6 1383 aa18.18■□□□□ 0.5
PHF20-202ENST00000374000 PRDM15P57071 1507 aaPredicted RBP18.18■□□□□ 0.5
PHF20-202ENST00000374000 RBM33Q96EV2 1170 aaKnown RBP18.17■□□□□ 0.5
PHF20-202ENST00000374000 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
PHF20-202ENST00000374000 KIF15Q9NS87 1388 aa18.16■□□□□ 0.5
PHF20-202ENST00000374000 MAP3K1Q13233 1512 aa18.15■□□□□ 0.5
PHF20-202ENST00000374000 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.14■□□□□ 0.58e-7■■□□□ 12.2
PHF20-202ENST00000374000 KCNA6P17658 529 aa18.14■□□□□ 0.49
PHF20-202ENST00000374000 RRP7BPQ9NSQ0 103 aa18.14■□□□□ 0.49
PHF20-202ENST00000374000 ROBO1Q9Y6N7 1651 aa18.13■□□□□ 0.49
PHF20-202ENST00000374000 VPS8Q8N3P4 1428 aa18.13■□□□□ 0.49
PHF20-202ENST00000374000 SLC26A8Q96RN1 970 aa18.13■□□□□ 0.49
PHF20-202ENST00000374000 IDI1Q13907 227 aa18.12■□□□□ 0.49
PHF20-202ENST00000374000 ABCC5O15440 1437 aa18.12■□□□□ 0.49
PHF20-202ENST00000374000 ERBINQ96RT1 1412 aa18.12■□□□□ 0.49
PHF20-202ENST00000374000 TET3O43151 1660 aa18.12■□□□□ 0.49
PHF20-202ENST00000374000 PROSER2Q86WR7 435 aaPredicted RBP18.12■□□□□ 0.49
PHF20-202ENST00000374000 STAG3Q9UJ98 1225 aa18.12■□□□□ 0.49
PHF20-202ENST00000374000 EFCAB6Q5THR3 1501 aa18.11■□□□□ 0.49
PHF20-202ENST00000374000 CROCC2H7BZ55 1655 aa18.08■□□□□ 0.48
PHF20-202ENST00000374000 SETD1AO15047 1707 aaKnown RBP18.07■□□□□ 0.48
PHF20-202ENST00000374000 KDM5AP29375 1690 aaKnown RBP18.07■□□□□ 0.48
PHF20-202ENST00000374000 NWD1Q149M9 1564 aa18.06■□□□□ 0.48
PHF20-202ENST00000374000 LMTK2Q8IWU2 1503 aa18.06■□□□□ 0.48
PHF20-202ENST00000374000 KANK1Q14678 1352 aa18.05■□□□□ 0.48
PHF20-202ENST00000374000 NKTRP30414 1462 aaKnown RBP18.05■□□□□ 0.48
PHF20-202ENST00000374000 NOS1P29475 1434 aa18.04■□□□□ 0.48
PHF20-202ENST00000374000 DAPK1P53355 1430 aa18.04■□□□□ 0.48
PHF20-202ENST00000374000 SLAIN2Q9P270 581 aa18.03■□□□□ 0.48
PHF20-202ENST00000374000 ADGRB3O60242 1522 aa18.03■□□□□ 0.48
PHF20-202ENST00000374000 PTPN23Q9H3S7 1636 aa18.03■□□□□ 0.48
PHF20-202ENST00000374000 MSH6P52701 1360 aa18.02■□□□□ 0.48
PHF20-202ENST00000374000 PHLPP1O60346 1717 aa18.02■□□□□ 0.48
PHF20-202ENST00000374000 LOC105371045A0A1W2PR82 267 aa18.02■□□□□ 0.47
PHF20-202ENST00000374000 JCADQ9P266 1359 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms