RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 CLIP1P30622 1438 aa20.88■□□□□ 0.93
HDAC8-204ENST00000373560 ATP7AQ04656 1500 aa20.87■□□□□ 0.93
HDAC8-204ENST00000373560 LRRC7Q96NW7 1537 aa20.87■□□□□ 0.93
HDAC8-204ENST00000373560 SYNMO15061 1565 aa20.84■□□□□ 0.93
HDAC8-204ENST00000373560 IQGAP1P46940 1657 aa20.83■□□□□ 0.93
HDAC8-204ENST00000373560 A2MP01023 1474 aa20.83■□□□□ 0.93
HDAC8-204ENST00000373560 ARHGAP35Q9NRY4 1499 aa20.81■□□□□ 0.92
HDAC8-204ENST00000373560 XIRP1Q702N8 1843 aaKnown RBP20.81■□□□□ 0.92
HDAC8-204ENST00000373560 FMN1Q68DA7 1419 aa20.81■□□□□ 0.92
HDAC8-204ENST00000373560 GGT6Q6P531 493 aa20.81■□□□□ 0.92
HDAC8-204ENST00000373560 CDK11AQ9UQ88 783 aaPredicted RBP20.81■□□□□ 0.92
HDAC8-204ENST00000373560 DEPDC5O75140 1603 aa20.81■□□□□ 0.92
HDAC8-204ENST00000373560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.81■□□□□ 0.92
HDAC8-204ENST00000373560 NPHP4O75161 1426 aaPredicted RBP20.79■□□□□ 0.92
HDAC8-204ENST00000373560 MED14O60244 1454 aa20.79■□□□□ 0.92
HDAC8-204ENST00000373560 DCAF8L1A6NGE4 600 aa20.78■□□□□ 0.92
HDAC8-204ENST00000373560 SPAG9O60271 1321 aaKnown RBP20.78■□□□□ 0.92
HDAC8-204ENST00000373560 TNRQ92752 1358 aa20.77■□□□□ 0.92
HDAC8-204ENST00000373560 FBXO31Q5XUX0 539 aaPredicted RBP20.77■□□□□ 0.92
HDAC8-204ENST00000373560 ADGBQ8N7X0 1667 aa20.76■□□□□ 0.91
HDAC8-204ENST00000373560 ZC3H13Q5T200 1668 aaKnown RBP20.75■□□□□ 0.91
HDAC8-204ENST00000373560 HNRNPMP52272 730 aaKnown RBP eCLIP20.74■□□□□ 0.91
HDAC8-204ENST00000373560 ZNF777Q9ULD5 760 aaPredicted RBP20.73■□□□□ 0.91
HDAC8-204ENST00000373560 UGGT1Q9NYU2 1555 aa20.71■□□□□ 0.91
HDAC8-204ENST00000373560 PZPP20742 1482 aa20.7■□□□□ 0.9
HDAC8-204ENST00000373560 ANKLE2Q86XL3 938 aa20.7■□□□□ 0.9
HDAC8-204ENST00000373560 EHMT2Q96KQ7 1210 aa20.67■□□□□ 0.9
HDAC8-204ENST00000373560 EEA1Q15075 1411 aa20.67■□□□□ 0.9
HDAC8-204ENST00000373560 GPATCH8Q9UKJ3 1502 aaKnown RBP20.67■□□□□ 0.9
HDAC8-204ENST00000373560 KDM5DQ9BY66 1539 aa20.65■□□□□ 0.9
HDAC8-204ENST00000373560 ROBO1Q9Y6N7 1651 aa20.64■□□□□ 0.9
HDAC8-204ENST00000373560 FAM135AQ9P2D6 1515 aa20.63■□□□□ 0.89
HDAC8-204ENST00000373560 NLRP1Q9C000 1473 aa20.62■□□□□ 0.89
HDAC8-204ENST00000373560 UPF1Q92900 1129 aaKnown RBP eCLIP20.62■□□□□ 0.89
HDAC8-204ENST00000373560 CCDC18Q5T9S5 1454 aa20.61■□□□□ 0.89
HDAC8-204ENST00000373560 MIA2Q96PC5 1412 aa20.6■□□□□ 0.89
HDAC8-204ENST00000373560 KIAA1107Q9UPP5 1409 aa20.6■□□□□ 0.89
HDAC8-204ENST00000373560 THEMISQ8N1K5 641 aaPredicted RBP20.58■□□□□ 0.89
HDAC8-204ENST00000373560 FAM135BQ49AJ0 1406 aa20.58■□□□□ 0.88
HDAC8-204ENST00000373560 SRCAPQ6ZRS2 3230 aa20.57■□□□□ 0.88
HDAC8-204ENST00000373560 UBR1Q8IWV7 1749 aa20.55■□□□□ 0.88
HDAC8-204ENST00000373560 PLEKHH2Q8IVE3 1493 aa20.55■□□□□ 0.88
HDAC8-204ENST00000373560 CASKIN1Q8WXD9 1431 aa20.54■□□□□ 0.88
HDAC8-204ENST00000373560 LRP6O75581 1613 aa20.53■□□□□ 0.88
HDAC8-204ENST00000373560 MAP3K1Q13233 1512 aa20.53■□□□□ 0.88
HDAC8-204ENST00000373560 PHLPP1O60346 1717 aa20.52■□□□□ 0.88
HDAC8-204ENST00000373560 MBD5Q9P267 1494 aa20.51■□□□□ 0.87
HDAC8-204ENST00000373560 DHX29Q7Z478 1369 aaKnown RBP20.51■□□□□ 0.87
HDAC8-204ENST00000373560 ZNF644Q9H582 1327 aaPredicted RBP20.51■□□□□ 0.87
HDAC8-204ENST00000373560 KIF3BO15066 747 aa20.49■□□□□ 0.87
HDAC8-204ENST00000373560 SCAF11Q99590 1463 aaKnown RBP20.49■□□□□ 0.87
HDAC8-204ENST00000373560 UBTFP17480 764 aaKnown RBP20.48■□□□□ 0.87
HDAC8-204ENST00000373560 TRIM52Q96A61 297 aa20.48■□□□□ 0.87
HDAC8-204ENST00000373560 NCOA2Q15596 1464 aa20.48■□□□□ 0.87
HDAC8-204ENST00000373560 CFDP1Q9UEE9 299 aaPredicted RBP20.47■□□□□ 0.87
HDAC8-204ENST00000373560 TIAM1Q13009 1591 aa20.46■□□□□ 0.87
HDAC8-204ENST00000373560 ERVK-7P63135 1459 aa20.45■□□□□ 0.86
HDAC8-204ENST00000373560 WASHC2CQ9Y4E1 1318 aa20.45■□□□□ 0.86
HDAC8-204ENST00000373560 COL16A1Q07092 1604 aaPredicted RBP20.45■□□□□ 0.86
HDAC8-204ENST00000373560 LTKP29376 864 aa20.44■□□□□ 0.86
HDAC8-204ENST00000373560 TMEM94Q12767 1356 aa20.44■□□□□ 0.86
HDAC8-204ENST00000373560 RTEL1-TNFRSF6BF6WH68 1400 aa20.44■□□□□ 0.86
HDAC8-204ENST00000373560 ARHGAP23Q9P227 1491 aa20.43■□□□□ 0.86
HDAC8-204ENST00000373560 ABCC3O15438 1527 aa20.43■□□□□ 0.86
HDAC8-204ENST00000373560 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
HDAC8-204ENST00000373560 FYCO1Q9BQS8 1478 aa20.43■□□□□ 0.86
HDAC8-204ENST00000373560 CFAP65Q6ZU64 1925 aaKnown RBP20.42■□□□□ 0.86
HDAC8-204ENST00000373560 CCNB3Q8WWL7 1395 aa20.42■□□□□ 0.86
HDAC8-204ENST00000373560 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
HDAC8-204ENST00000373560 SLIT1O75093 1534 aa20.41■□□□□ 0.86
HDAC8-204ENST00000373560 CEP152O94986 1710 aa20.4■□□□□ 0.86
HDAC8-204ENST00000373560 JCADQ9P266 1359 aa20.39■□□□□ 0.85
HDAC8-204ENST00000373560 MROH1Q8NDA8 1641 aa20.38■□□□□ 0.85
HDAC8-204ENST00000373560 LRRC9Q6ZRR7 1453 aa20.37■□□□□ 0.85
HDAC8-204ENST00000373560 CCDC141Q6ZP82 1450 aa20.33■□□□□ 0.85
HDAC8-204ENST00000373560 PIK3C2BO00750 1634 aa20.32■□□□□ 0.84
HDAC8-204ENST00000373560 TXNDC2Q86VQ3 553 aa20.32■□□□□ 0.84
HDAC8-204ENST00000373560 NWD1Q149M9 1564 aa20.32■□□□□ 0.84
HDAC8-204ENST00000373560 PRDM15P57071 1507 aaPredicted RBP20.32■□□□□ 0.84
HDAC8-204ENST00000373560 SHPRHQ149N8 1683 aa20.32■□□□□ 0.84
HDAC8-204ENST00000373560 SETBP1Q9Y6X0 1596 aa20.29■□□□□ 0.84
HDAC8-204ENST00000373560 CDK12Q9NYV4 1490 aaPredicted RBP20.29■□□□□ 0.84
HDAC8-204ENST00000373560 ZNF772Q68DY9 489 aaPredicted RBP20.28■□□□□ 0.84
HDAC8-204ENST00000373560 CAMSAP2Q08AD1 1489 aa20.28■□□□□ 0.84
HDAC8-204ENST00000373560 TET3O43151 1660 aa20.28■□□□□ 0.84
HDAC8-204ENST00000373560 RGS12O14924 1447 aa20.27■□□□□ 0.84
HDAC8-204ENST00000373560 KDM5AP29375 1690 aaKnown RBP20.27■□□□□ 0.84
HDAC8-204ENST00000373560 MEX3CQ5U5Q3 659 aaKnown RBP20.27■□□□□ 0.84
HDAC8-204ENST00000373560 RXRBP28702 533 aa20.25■□□□□ 0.83
HDAC8-204ENST00000373560 PROSER2Q86WR7 435 aaPredicted RBP20.25■□□□□ 0.83
HDAC8-204ENST00000373560 NKTRP30414 1462 aaKnown RBP20.24■□□□□ 0.83
HDAC8-204ENST00000373560 DIP2AQ14689 1571 aa20.24■□□□□ 0.83
HDAC8-204ENST00000373560 MTUS2Q5JR59 1369 aa20.23■□□□□ 0.83
HDAC8-204ENST00000373560 KCNA6P17658 529 aa20.23■□□□□ 0.83
HDAC8-204ENST00000373560 AHDC1Q5TGY3 1603 aaPredicted RBP20.23■□□□□ 0.83
HDAC8-204ENST00000373560 EIF2AK4Q9P2K8 1649 aaKnown RBP20.23■□□□□ 0.83
HDAC8-204ENST00000373560 SPATA31A6Q5VVP1 1343 aa20.23■□□□□ 0.83
HDAC8-204ENST00000373560 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
HDAC8-204ENST00000373560 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
HDAC8-204ENST00000373560 SLAIN2Q9P270 581 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms