RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 NISCHQ9Y2I1 1504 aa32.44■■■□□ 2.78
HDAC8-204ENST00000373560 AEBP2Q6ZN18 517 aaPredicted RBP31.73■■■□□ 2.67
HDAC8-204ENST00000373560 CHIC1Q5VXU3 224 aa30.87■■■□□ 2.53
HDAC8-204ENST00000373560 ABCC9O60706 1549 aa30.6■■■□□ 2.49
HDAC8-204ENST00000373560 DNAJC5BQ9UF47 199 aa29.63■■■□□ 2.33
HDAC8-204ENST00000373560 CCDC180Q9P1Z9 1646 aa29.57■■■□□ 2.32
HDAC8-204ENST00000373560 RB1CC1Q8TDY2 1594 aa28.58■■■□□ 2.17
HDAC8-204ENST00000373560 PABPN1Q86U42 306 aaKnown RBP eCLIP28.27■■■□□ 2.12
HDAC8-204ENST00000373560 UNC13AQ9UPW8 1703 aa28.18■■■□□ 2.1
HDAC8-204ENST00000373560 NACADO15069 1562 aa28.11■■■□□ 2.09
HDAC8-204ENST00000373560 BICRAQ9NZM4 1560 aa27.96■■■□□ 2.07
HDAC8-204ENST00000373560 DNAJC5Q9H3Z4 198 aa27.77■■■□□ 2.04
HDAC8-204ENST00000373560 DCAF8L2P0C7V8 631 aa27.68■■■□□ 2.02
HDAC8-204ENST00000373560 CECR2Q9BXF3 1484 aa27.6■■■□□ 2.01
HDAC8-204ENST00000373560 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
HDAC8-204ENST00000373560 MYO15BQ96JP2 1530 aa27.33■■□□□ 1.97
HDAC8-204ENST00000373560 EIF4G1Q04637 1599 aaKnown RBP27.27■■□□□ 1.96
HDAC8-204ENST00000373560 SHROOM4Q9ULL8 1493 aa27.21■■□□□ 1.95
HDAC8-204ENST00000373560 PHF23Q9BUL5 403 aaPredicted RBP27.13■■□□□ 1.93
HDAC8-204ENST00000373560 SENP3Q9H4L4 574 aaPredicted RBP26.99■■□□□ 1.91
HDAC8-204ENST00000373560 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
HDAC8-204ENST00000373560 ZCCHC6Q5VYS8 1495 aaKnown RBP26.71■■□□□ 1.87
HDAC8-204ENST00000373560 CUX2O14529 1486 aa26.66■■□□□ 1.86
HDAC8-204ENST00000373560 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
HDAC8-204ENST00000373560 ERCC6Q03468 1493 aa26.38■■□□□ 1.81
HDAC8-204ENST00000373560 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
HDAC8-204ENST00000373560 NESP48681 1621 aa26.06■■□□□ 1.76
HDAC8-204ENST00000373560 THOC2Q8NI27 1593 aaKnown RBP26.01■■□□□ 1.75
HDAC8-204ENST00000373560 NCAPD3P42695 1498 aa25.95■■□□□ 1.74
HDAC8-204ENST00000373560 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
HDAC8-204ENST00000373560 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
HDAC8-204ENST00000373560 KIF21AQ7Z4S6 1674 aa25.73■■□□□ 1.71
HDAC8-204ENST00000373560 HMGXB3Q12766 1538 aa25.73■■□□□ 1.71
HDAC8-204ENST00000373560 SMARCA4P51532 1647 aa25.58■■□□□ 1.69
HDAC8-204ENST00000373560 LAMC3Q9Y6N6 1575 aa25.56■■□□□ 1.68
HDAC8-204ENST00000373560 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
HDAC8-204ENST00000373560 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
HDAC8-204ENST00000373560 PDS5BQ9NTI5 1447 aa25.35■■□□□ 1.65
HDAC8-204ENST00000373560 WDR62O43379 1518 aa25.32■■□□□ 1.64
HDAC8-204ENST00000373560 MRC2Q9UBG0 1479 aa25.31■■□□□ 1.64
HDAC8-204ENST00000373560 PEG3Q9GZU2 1588 aa25.28■■□□□ 1.64
HDAC8-204ENST00000373560 RIMBP3CA6NJZ7 1639 aa25.23■■□□□ 1.63
HDAC8-204ENST00000373560 RIMBP3BA6NNM3 1639 aa25.23■■□□□ 1.63
HDAC8-204ENST00000373560 RIMBP3Q9UFD9 1639 aa25.23■■□□□ 1.63
HDAC8-204ENST00000373560 OSCARQ8IYS5 282 aa25.16■■□□□ 1.62
HDAC8-204ENST00000373560 CADPSQ9ULU8 1353 aa25.09■■□□□ 1.61
HDAC8-204ENST00000373560 MROH2BQ7Z745 1585 aa25.07■■□□□ 1.6
HDAC8-204ENST00000373560 FOXD1Q16676 465 aa25.05■■□□□ 1.6
HDAC8-204ENST00000373560 PLPPR3Q6T4P5 718 aa25.05■■□□□ 1.6
HDAC8-204ENST00000373560 CEP164Q9UPV0 1460 aa25■■□□□ 1.59
HDAC8-204ENST00000373560 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
HDAC8-204ENST00000373560 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.57
HDAC8-204ENST00000373560 URB2Q14146 1524 aaKnown RBP24.84■■□□□ 1.57
HDAC8-204ENST00000373560 WIZO95785 1651 aa24.76■■□□□ 1.55
HDAC8-204ENST00000373560 TRHP20396 242 aaPredicted RBP24.74■■□□□ 1.55
HDAC8-204ENST00000373560 CYB5RLQ6IPT4 315 aa24.73■■□□□ 1.55
HDAC8-204ENST00000373560 ZNF608Q9ULD9 1512 aaPredicted RBP24.71■■□□□ 1.55
HDAC8-204ENST00000373560 ARAP1Q96P48 1450 aa24.7■■□□□ 1.55
HDAC8-204ENST00000373560 CFTRP13569 1480 aa24.65■■□□□ 1.54
HDAC8-204ENST00000373560 CHD1O14646 1710 aa24.58■■□□□ 1.53
HDAC8-204ENST00000373560 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
HDAC8-204ENST00000373560 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
HDAC8-204ENST00000373560 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
HDAC8-204ENST00000373560 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
HDAC8-204ENST00000373560 TOPBP1Q92547 1522 aa24.34■■□□□ 1.49
HDAC8-204ENST00000373560 AQRO60306 1485 aaKnown RBP eCLIP24.28■■□□□ 1.48
HDAC8-204ENST00000373560 TOP2AP11388 1531 aaKnown RBP24.28■■□□□ 1.48
HDAC8-204ENST00000373560 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
HDAC8-204ENST00000373560 CLASP1Q7Z460 1538 aa24.21■■□□□ 1.47
HDAC8-204ENST00000373560 FBLN2P98095 1184 aa24.21■■□□□ 1.47
HDAC8-204ENST00000373560 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
HDAC8-204ENST00000373560 SNAPC4Q5SXM2 1469 aa24.04■■□□□ 1.44
HDAC8-204ENST00000373560 POLA1P09884 1462 aaPredicted RBP24.03■■□□□ 1.44
HDAC8-204ENST00000373560 ADRA2BP18089 450 aa24.03■■□□□ 1.44
HDAC8-204ENST00000373560 ABCC8Q09428 1581 aa24.02■■□□□ 1.44
HDAC8-204ENST00000373560 SYNJ1O43426 1573 aa24■■□□□ 1.43
HDAC8-204ENST00000373560 PPP6R1Q9UPN7 881 aa24■■□□□ 1.43
HDAC8-204ENST00000373560 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
HDAC8-204ENST00000373560 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
HDAC8-204ENST00000373560 TDRD9Q8NDG6 1382 aaKnown RBP23.95■■□□□ 1.42
HDAC8-204ENST00000373560 ILDR1Q86SU0 546 aaPredicted RBP23.95■■□□□ 1.42
HDAC8-204ENST00000373560 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
HDAC8-204ENST00000373560 ERCC6L2Q5T890 1561 aa23.86■■□□□ 1.41
HDAC8-204ENST00000373560 KIF13AQ9H1H9 1805 aa23.84■■□□□ 1.41
HDAC8-204ENST00000373560 MAGI1Q96QZ7 1491 aaPredicted RBP23.82■■□□□ 1.4
HDAC8-204ENST00000373560 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
HDAC8-204ENST00000373560 SOGA1O94964 1423 aa23.8■■□□□ 1.4
HDAC8-204ENST00000373560 WDR97A6NE52 1622 aa23.78■■□□□ 1.4
HDAC8-204ENST00000373560 SYNJ2O15056 1496 aa23.78■■□□□ 1.4
HDAC8-204ENST00000373560 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
HDAC8-204ENST00000373560 PBRM1Q86U86 1689 aa23.74■■□□□ 1.39
HDAC8-204ENST00000373560 GRIN2BQ13224 1484 aa23.73■■□□□ 1.39
HDAC8-204ENST00000373560 PIAS4Q8N2W9 510 aaPredicted RBP23.67■■□□□ 1.38
HDAC8-204ENST00000373560 KDM4FA0A1W2PPD8 638 aa23.64■■□□□ 1.37
HDAC8-204ENST00000373560 CUX1P39880 1505 aa23.61■■□□□ 1.37
HDAC8-204ENST00000373560 CEP170Q5SW79 1584 aa23.61■■□□□ 1.37
HDAC8-204ENST00000373560 ABCA5Q8WWZ7 1642 aa23.52■■□□□ 1.36
HDAC8-204ENST00000373560 SHROOM2Q13796 1616 aa23.51■■□□□ 1.35
HDAC8-204ENST00000373560 GRIN2AQ12879 1464 aa23.48■■□□□ 1.35
HDAC8-204ENST00000373560 KDM6BO15054 1643 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 255 ms