RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 SKAP1Q86WV1 359 aa22.29■■□□□ 1.16
DKC1-201ENST00000369550 MBD5Q9P267 1494 aa22.29■■□□□ 1.16
DKC1-201ENST00000369550 ZNF644Q9H582 1327 aaPredicted RBP22.29■■□□□ 1.16
DKC1-201ENST00000369550 PLIN1O60240 522 aa22.28■■□□□ 1.16
DKC1-201ENST00000369550 KDM5CP41229 1560 aa22.27■■□□□ 1.16
DKC1-201ENST00000369550 EIF5BO60841 1220 aaKnown RBP22.27■■□□□ 1.16
DKC1-201ENST00000369550 SLC4A3P48751 1232 aa22.27■■□□□ 1.16
DKC1-201ENST00000369550 ABCA8O94911 1581 aa22.27■■□□□ 1.16
DKC1-201ENST00000369550 ADCY10Q96PN6 1610 aa22.26■■□□□ 1.15
DKC1-201ENST00000369550 KTN1Q86UP2 1357 aaKnown RBP22.26■■□□□ 1.15
DKC1-201ENST00000369550 PRG4Q92954 1404 aaPredicted RBP22.26■■□□□ 1.15
DKC1-201ENST00000369550 FRAT1Q92837 279 aaPredicted RBP22.25■■□□□ 1.15
DKC1-201ENST00000369550 CDCA7LQ96GN5 454 aa22.25■■□□□ 1.15
DKC1-201ENST00000369550 KIF14Q15058 1648 aa22.25■■□□□ 1.15
DKC1-201ENST00000369550 PZPP20742 1482 aa22.24■■□□□ 1.15
DKC1-201ENST00000369550 DNMT1P26358 1616 aaKnown RBP22.24■■□□□ 1.15
DKC1-201ENST00000369550 ITSN2Q9NZM3 1697 aa22.23■■□□□ 1.15
DKC1-201ENST00000369550 PKD2Q13563 968 aa22.23■■□□□ 1.15
DKC1-201ENST00000369550 ST20-MTHFSA0A0A6YYL1 179 aa22.23■■□□□ 1.15
DKC1-201ENST00000369550 NLRP13Q86W25 1043 aa22.23■■□□□ 1.15
DKC1-201ENST00000369550 CRBNQ96SW2 442 aa22.23■■□□□ 1.15
DKC1-201ENST00000369550 KIAA1107Q9UPP5 1409 aa22.23■■□□□ 1.15
DKC1-201ENST00000369550 CHD1O14646 1710 aa22.22■■□□□ 1.15
DKC1-201ENST00000369550 UBE2Q2Q8WVN8 375 aa22.21■■□□□ 1.15
DKC1-201ENST00000369550 KDM2AQ9Y2K7 1162 aa22.18■■□□□ 1.14
DKC1-201ENST00000369550 GPATCH8Q9UKJ3 1502 aaKnown RBP22.17■■□□□ 1.14
DKC1-201ENST00000369550 RALGAPBQ86X10 1494 aa22.17■■□□□ 1.14
DKC1-201ENST00000369550 ATP10BO94823 1461 aa22.15■■□□□ 1.14
DKC1-201ENST00000369550 CAMSAP2Q08AD1 1489 aa22.15■■□□□ 1.14
DKC1-201ENST00000369550 CFDP1Q9UEE9 299 aaPredicted RBP22.14■■□□□ 1.13
DKC1-201ENST00000369550 PTPRGP23470 1445 aa22.13■■□□□ 1.13
DKC1-201ENST00000369550 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
DKC1-201ENST00000369550 UHRF1BP1Q6BDS2 1440 aa22.12■■□□□ 1.13
DKC1-201ENST00000369550 PLEKHD1A6NEE1 506 aa22.12■■□□□ 1.13
DKC1-201ENST00000369550 PARD3Q8TEW0 1356 aa22.1■■□□□ 1.13
DKC1-201ENST00000369550 FRAT2O75474 233 aaPredicted RBP22.09■■□□□ 1.13
DKC1-201ENST00000369550 FAM161AQ3B820 660 aa22.09■■□□□ 1.13
DKC1-201ENST00000369550 C20orf194Q5TEA3 1177 aa22.09■■□□□ 1.13
DKC1-201ENST00000369550 ZNF777Q9ULD5 760 aaPredicted RBP22.09■■□□□ 1.13
DKC1-201ENST00000369550 DCAF11Q8TEB1 546 aa22.08■■□□□ 1.13
DKC1-201ENST00000369550 ABCC10Q5T3U5 1492 aa22.08■■□□□ 1.13
DKC1-201ENST00000369550 CENPQQ7L2Z9 268 aaPredicted RBP22.08■■□□□ 1.12
DKC1-201ENST00000369550 ADGBQ8N7X0 1667 aa22.07■■□□□ 1.12
DKC1-201ENST00000369550 CDC42BPAQ5VT25 1732 aa22.07■■□□□ 1.12
DKC1-201ENST00000369550 CROCC2H7BZ55 1655 aa22.06■■□□□ 1.12
DKC1-201ENST00000369550 KDM2BQ8NHM5 1336 aa22.06■■□□□ 1.12
DKC1-201ENST00000369550 CC2D1BQ5T0F9 858 aaKnown RBP22.06■■□□□ 1.12
DKC1-201ENST00000369550 C8orf34Q49A92 452 aa22.03■■□□□ 1.12
DKC1-201ENST00000369550 RSPH6AQ9H0K4 717 aa22.03■■□□□ 1.12
DKC1-201ENST00000369550 ADGRL2O95490 1459 aa22.03■■□□□ 1.12
DKC1-201ENST00000369550 NUP155O75694 1391 aa22.02■■□□□ 1.12
DKC1-201ENST00000369550 FAM43AQ8N2R8 423 aa22.02■■□□□ 1.12
DKC1-201ENST00000369550 ANKRD30AQ9BXX3 1397 aa22.02■■□□□ 1.12
DKC1-201ENST00000369550 RGS3P49796 1198 aa22.02■■□□□ 1.12
DKC1-201ENST00000369550 ARHGEF12Q9NZN5 1544 aa22.02■■□□□ 1.11
DKC1-201ENST00000369550 E9PCH4 1651 aa22.01■■□□□ 1.11
DKC1-201ENST00000369550 ANKRD50Q9ULJ7 1429 aa22■■□□□ 1.11
DKC1-201ENST00000369550 BLMP54132 1417 aaPredicted RBP21.99■■□□□ 1.11
DKC1-201ENST00000369550 PER1O15534 1290 aaPredicted RBP21.99■■□□□ 1.11
DKC1-201ENST00000369550 SHANK2Q9UPX8 1470 aa21.96■■□□□ 1.11
DKC1-201ENST00000369550 PLEKHH2Q8IVE3 1493 aa21.96■■□□□ 1.11
DKC1-201ENST00000369550 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.94■■□□□ 1.1
DKC1-201ENST00000369550 ERCC6L2Q5T890 1561 aa21.94■■□□□ 1.1
DKC1-201ENST00000369550 CLASP1Q7Z460 1538 aa21.94■■□□□ 1.1
DKC1-201ENST00000369550 INSRP06213 1382 aa21.94■■□□□ 1.1
DKC1-201ENST00000369550 ABCC2Q92887 1545 aa21.93■■□□□ 1.1
DKC1-201ENST00000369550 ZMYM4Q5VZL5 1548 aa21.92■■□□□ 1.1
DKC1-201ENST00000369550 PANK3Q9H999 370 aa21.91■■□□□ 1.1
DKC1-201ENST00000369550 ADAMTS8Q9UP79 889 aa21.91■■□□□ 1.1
DKC1-201ENST00000369550 PREX2Q70Z35 1606 aa21.91■■□□□ 1.1
DKC1-201ENST00000369550 ARHGEF5Q12774 1597 aa21.9■■□□□ 1.1
DKC1-201ENST00000369550 C9orf84Q5VXU9 1444 aa21.89■■□□□ 1.1
DKC1-201ENST00000369550 DUSP27Q5VZP5 1158 aa21.89■■□□□ 1.09
DKC1-201ENST00000369550 CDC42BPBQ9Y5S2 1711 aa21.88■■□□□ 1.09
DKC1-201ENST00000369550 WDR43Q15061 677 aaKnown RBP eCLIP21.87■■□□□ 1.093e-6■■■■■ 38.4
DKC1-201ENST00000369550 NBPF1Q3BBV0 1214 aa21.87■■□□□ 1.09
DKC1-201ENST00000369550 POGKQ9P215 609 aa21.87■■□□□ 1.09
DKC1-201ENST00000369550 GOLGA2Q08379 1002 aa21.86■■□□□ 1.09
DKC1-201ENST00000369550 RGL3Q3MIN7 710 aa21.86■■□□□ 1.09
DKC1-201ENST00000369550 SAMD9LQ8IVG5 1584 aa21.85■■□□□ 1.09
DKC1-201ENST00000369550 DISP3Q9P2K9 1392 aa21.84■■□□□ 1.09
DKC1-201ENST00000369550 TSPY4P0CV99 314 aa21.84■■□□□ 1.09
DKC1-201ENST00000369550 TSPY10P0CW01 314 aa21.84■■□□□ 1.09
DKC1-201ENST00000369550 PLEKHH1Q9ULM0 1364 aa21.84■■□□□ 1.09
DKC1-201ENST00000369550 TTC37Q6PGP7 1564 aa21.83■■□□□ 1.08
DKC1-201ENST00000369550 BECN1Q14457 450 aa21.82■■□□□ 1.08
DKC1-201ENST00000369550 SLKQ9H2G2 1235 aaPredicted RBP21.82■■□□□ 1.08
DKC1-201ENST00000369550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.82■■□□□ 1.08
DKC1-201ENST00000369550 PRAG1Q86YV5 1406 aa21.82■■□□□ 1.08
DKC1-201ENST00000369550 CCDC141Q6ZP82 1450 aa21.82■■□□□ 1.08
DKC1-201ENST00000369550 COL17A1Q9UMD9 1497 aaPredicted RBP21.82■■□□□ 1.08
DKC1-201ENST00000369550 UHRF1BP1LA0JNW5 1464 aa21.81■■□□□ 1.08
DKC1-201ENST00000369550 HNRNPMP52272 730 aaKnown RBP eCLIP21.81■■□□□ 1.08
DKC1-201ENST00000369550 L1TD1Q5T7N2 865 aaKnown RBP21.8■■□□□ 1.08
DKC1-201ENST00000369550 TMF1P82094 1093 aa21.8■■□□□ 1.08
DKC1-201ENST00000369550 RSPH4AQ5TD94 716 aa21.8■■□□□ 1.08
DKC1-201ENST00000369550 TESK2Q96S53 571 aa21.79■■□□□ 1.08
DKC1-201ENST00000369550 KDM5DQ9BY66 1539 aa21.78■■□□□ 1.08
DKC1-201ENST00000369550 MYO5CQ9NQX4 1742 aa21.78■■□□□ 1.08
DKC1-201ENST00000369550 ZCCHC11Q5TAX3 1644 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms