RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 RNF17Q9BXT8 1623 aaKnown RBP28.39■■■□□ 2.13
CHTOP-202ENST00000368687 SETD1BQ9UPS6 1966 aaKnown RBP28.38■■■□□ 2.13
CHTOP-202ENST00000368687 ADGRL2O95490 1459 aa28.38■■■□□ 2.13
CHTOP-202ENST00000368687 CLTCQ00610 1675 aaKnown RBP28.37■■■□□ 2.13
CHTOP-202ENST00000368687 KDM5DQ9BY66 1539 aa28.35■■■□□ 2.13
CHTOP-202ENST00000368687 PPARGC1BQ86YN6 1023 aaKnown RBP28.34■■■□□ 2.13
CHTOP-202ENST00000368687 NCOA1Q15788 1441 aa28.34■■■□□ 2.13
CHTOP-202ENST00000368687 PREX1Q8TCU6 1659 aa28.32■■■□□ 2.12
CHTOP-202ENST00000368687 ZC3H13Q5T200 1668 aaKnown RBP28.32■■■□□ 2.12
CHTOP-202ENST00000368687 ZMYM3Q14202 1370 aa28.31■■■□□ 2.12
CHTOP-202ENST00000368687 NPATQ14207 1427 aa28.31■■■□□ 2.12
CHTOP-202ENST00000368687 RRBP1Q9P2E9 1410 aaKnown RBP28.31■■■□□ 2.12
CHTOP-202ENST00000368687 RRP7BPQ9NSQ0 103 aa28.3■■■□□ 2.12
CHTOP-202ENST00000368687 CHIC2Q9UKJ5 165 aa28.28■■■□□ 2.12
CHTOP-202ENST00000368687 ROCK1Q13464 1354 aa28.27■■■□□ 2.12
CHTOP-202ENST00000368687 WASHC2CQ9Y4E1 1318 aa28.26■■■□□ 2.11
CHTOP-202ENST00000368687 UHRF1BP1Q6BDS2 1440 aa28.25■■■□□ 2.11
CHTOP-202ENST00000368687 PRDM15P57071 1507 aaPredicted RBP28.24■■■□□ 2.11
CHTOP-202ENST00000368687 DEPDC5O75140 1603 aa28.24■■■□□ 2.11
CHTOP-202ENST00000368687 MROH1Q8NDA8 1641 aa28.22■■■□□ 2.11
CHTOP-202ENST00000368687 PZPP20742 1482 aa28.2■■■□□ 2.1
CHTOP-202ENST00000368687 ABCC3O15438 1527 aa28.19■■■□□ 2.1
CHTOP-202ENST00000368687 PTPRKQ15262 1439 aa28.18■■■□□ 2.1
CHTOP-202ENST00000368687 ANKRD50Q9ULJ7 1429 aa28.18■■■□□ 2.1
CHTOP-202ENST00000368687 KANK1Q14678 1352 aa28.18■■■□□ 2.1
CHTOP-202ENST00000368687 ILDR1Q86SU0 546 aaPredicted RBP28.15■■■□□ 2.1
CHTOP-202ENST00000368687 CEP152O94986 1710 aa28.13■■■□□ 2.09
CHTOP-202ENST00000368687 CAMSAP1Q5T5Y3 1602 aa28.13■■■□□ 2.09
CHTOP-202ENST00000368687 MYO3AQ8NEV4 1616 aa28.11■■■□□ 2.09
CHTOP-202ENST00000368687 ZNF142P52746 1687 aaPredicted RBP28.1■■■□□ 2.09
CHTOP-202ENST00000368687 ITGAEP38570 1179 aa28.1■■■□□ 2.09
CHTOP-202ENST00000368687 VWDEQ8N2E2 1590 aa28.09■■■□□ 2.09
CHTOP-202ENST00000368687 LMTK2Q8IWU2 1503 aa28.08■■■□□ 2.09
CHTOP-202ENST00000368687 ARHGAP31Q2M1Z3 1444 aa28.08■■■□□ 2.09
CHTOP-202ENST00000368687 STRCQ7RTU9 1775 aa28.07■■■□□ 2.08
CHTOP-202ENST00000368687 UNC13BO14795 1591 aa28.05■■■□□ 2.08
CHTOP-202ENST00000368687 TNRQ92752 1358 aa28.05■■■□□ 2.08
CHTOP-202ENST00000368687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.05■■■□□ 2.084e-10■□□□□ 9.2
CHTOP-202ENST00000368687 CEP170BQ9Y4F5 1589 aaPredicted RBP28.04■■■□□ 2.08
CHTOP-202ENST00000368687 SPATA31D1Q6ZQQ2 1576 aa28.03■■■□□ 2.08
CHTOP-202ENST00000368687 NLRP1Q9C000 1473 aa28.02■■■□□ 2.08
CHTOP-202ENST00000368687 A2ML1A8K2U0 1454 aa28■■■□□ 2.07
CHTOP-202ENST00000368687 ERVK-7P63135 1459 aa28■■■□□ 2.07
CHTOP-202ENST00000368687 GCC2Q8IWJ2 1684 aa28■■■□□ 2.07
CHTOP-202ENST00000368687 FBXO31Q5XUX0 539 aaPredicted RBP27.99■■■□□ 2.07
CHTOP-202ENST00000368687 EFCAB6Q5THR3 1501 aa27.98■■■□□ 2.07
CHTOP-202ENST00000368687 TET3O43151 1660 aa27.97■■■□□ 2.07
CHTOP-202ENST00000368687 RPRD2Q5VT52 1461 aaKnown RBP27.96■■■□□ 2.07
CHTOP-202ENST00000368687 DMRT2Q9Y5R5 561 aa27.95■■■□□ 2.06
CHTOP-202ENST00000368687 HFM1A2PYH4 1435 aa27.94■■■□□ 2.06
CHTOP-202ENST00000368687 IQGAP3Q86VI3 1631 aa27.94■■■□□ 2.06
CHTOP-202ENST00000368687 PLA2R1Q13018 1463 aa27.94■■■□□ 2.06
CHTOP-202ENST00000368687 CFAP65Q6ZU64 1925 aaKnown RBP27.93■■■□□ 2.06
CHTOP-202ENST00000368687 PTPRTO14522 1441 aa27.92■■■□□ 2.06
CHTOP-202ENST00000368687 NAIPQ13075 1403 aa27.92■■■□□ 2.06
CHTOP-202ENST00000368687 FBXO41Q8TF61 875 aa27.9■■■□□ 2.06
CHTOP-202ENST00000368687 UGGT1Q9NYU2 1555 aa27.88■■■□□ 2.05
CHTOP-202ENST00000368687 NCKAP5LQ9HCH0 1330 aa27.87■■■□□ 2.05
CHTOP-202ENST00000368687 NUP155O75694 1391 aa27.86■■■□□ 2.05
CHTOP-202ENST00000368687 THEMISQ8N1K5 641 aaPredicted RBP27.85■■■□□ 2.05
CHTOP-202ENST00000368687 CERKQ8TCT0 537 aa27.85■■■□□ 2.05
CHTOP-202ENST00000368687 PKD2Q13563 968 aa27.84■■■□□ 2.05
CHTOP-202ENST00000368687 KDM5AP29375 1690 aaKnown RBP27.83■■■□□ 2.05
CHTOP-202ENST00000368687 NOS1P29475 1434 aa27.83■■■□□ 2.05
CHTOP-202ENST00000368687 ACIN1Q9UKV3 1341 aaKnown RBP27.82■■■□□ 2.04
CHTOP-202ENST00000368687 POLR1AO95602 1720 aaPredicted RBP27.79■■■□□ 2.04
CHTOP-202ENST00000368687 UBR1Q8IWV7 1749 aa27.79■■■□□ 2.04
CHTOP-202ENST00000368687 E9PCH4 1651 aa27.79■■■□□ 2.04
CHTOP-202ENST00000368687 SLC52A1Q9NWF4 448 aa27.78■■■□□ 2.04
CHTOP-202ENST00000368687 SYNMO15061 1565 aa27.77■■■□□ 2.04
CHTOP-202ENST00000368687 PIK3C2BO00750 1634 aa27.74■■■□□ 2.03
CHTOP-202ENST00000368687 LTBP4Q8N2S1 1624 aa27.74■■■□□ 2.03
CHTOP-202ENST00000368687 ANKLE2Q86XL3 938 aa27.72■■■□□ 2.03
CHTOP-202ENST00000368687 STAG3Q9UJ98 1225 aa27.7■■■□□ 2.02
CHTOP-202ENST00000368687 ADGRB3O60242 1522 aa27.7■■■□□ 2.02
CHTOP-202ENST00000368687 SLIT1O75093 1534 aa27.69■■■□□ 2.02
CHTOP-202ENST00000368687 NEURL4Q96JN8 1562 aa27.69■■■□□ 2.02
CHTOP-202ENST00000368687 IDI1Q13907 227 aa27.68■■■□□ 2.02
CHTOP-202ENST00000368687 ZNF335Q9H4Z2 1342 aaPredicted RBP27.67■■■□□ 2.02
CHTOP-202ENST00000368687 SPHKAPQ2M3C7 1700 aa27.67■■■□□ 2.02
CHTOP-202ENST00000368687 TRIM52Q96A61 297 aa27.67■■■□□ 2.02
CHTOP-202ENST00000368687 MED14O60244 1454 aa27.66■■■□□ 2.02
CHTOP-202ENST00000368687 ARHGAP23Q9P227 1491 aa27.66■■■□□ 2.02
CHTOP-202ENST00000368687 SETD5Q9C0A6 1442 aa27.65■■■□□ 2.02
CHTOP-202ENST00000368687 SCAF11Q99590 1463 aaKnown RBP27.63■■■□□ 2.01
CHTOP-202ENST00000368687 TMEM2Q9UHN6 1383 aa27.62■■■□□ 2.01
CHTOP-202ENST00000368687 EID1Q9Y6B2 187 aa27.62■■■□□ 2.01
CHTOP-202ENST00000368687 IQGAP1P46940 1657 aa27.61■■■□□ 2.01
CHTOP-202ENST00000368687 NPHP4O75161 1426 aaPredicted RBP27.6■■■□□ 2.01
CHTOP-202ENST00000368687 SLC4A1APQ9BWU0 796 aaKnown RBP27.59■■■□□ 2.01
CHTOP-202ENST00000368687 TMEM131LA2VDJ0 1609 aa27.59■■■□□ 2.01
CHTOP-202ENST00000368687 TRPM2O94759 1503 aa27.58■■■□□ 2.01
CHTOP-202ENST00000368687 HDGFP51858 240 aaKnown RBP27.55■■■□□ 2
CHTOP-202ENST00000368687 IQSEC2Q5JU85 1478 aa27.54■■■□□ 2
CHTOP-202ENST00000368687 TXNDC2Q86VQ3 553 aa27.54■■■□□ 2
CHTOP-202ENST00000368687 MYO5BQ9ULV0 1848 aa27.54■■■□□ 2
CHTOP-202ENST00000368687 RAB3GAP2Q9H2M9 1393 aa27.51■■□□□ 1.99
CHTOP-202ENST00000368687 HRCP23327 699 aa27.49■■□□□ 1.99
CHTOP-202ENST00000368687 LTKP29376 864 aa27.49■■□□□ 1.99
CHTOP-202ENST00000368687 ZFYVE9O95405 1425 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms