RNA–Protein interactions for RNA: ENST00000368258.7

CCT3-203, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-203ENST00000368258 ADGBQ8N7X0 1667 aa16.27■□□□□ 0.19
CCT3-203ENST00000368258 FOXD1Q16676 465 aa16.27■□□□□ 0.19
CCT3-203ENST00000368258 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.19
CCT3-203ENST00000368258 KIAA1107Q9UPP5 1409 aa16.26■□□□□ 0.19
CCT3-203ENST00000368258 RTN4Q9NQC3 1192 aaKnown RBP16.25■□□□□ 0.19
CCT3-203ENST00000368258 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
CCT3-203ENST00000368258 PLEKHH2Q8IVE3 1493 aa16.23■□□□□ 0.19
CCT3-203ENST00000368258 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
CCT3-203ENST00000368258 CDK13Q14004 1512 aaKnown RBP16.21■□□□□ 0.19
CCT3-203ENST00000368258 PRG4Q92954 1404 aaPredicted RBP16.21■□□□□ 0.19
CCT3-203ENST00000368258 NFKBIBQ15653 356 aa16.2■□□□□ 0.18
CCT3-203ENST00000368258 IQGAP2Q13576 1575 aa16.2■□□□□ 0.18
CCT3-203ENST00000368258 PARD3Q8TEW0 1356 aa16.19■□□□□ 0.18
CCT3-203ENST00000368258 CROCC2H7BZ55 1655 aa16.19■□□□□ 0.18
CCT3-203ENST00000368258 BRPF3Q9ULD4 1205 aa16.18■□□□□ 0.18
CCT3-203ENST00000368258 KIF13AQ9H1H9 1805 aa16.18■□□□□ 0.18
CCT3-203ENST00000368258 BLMP54132 1417 aaPredicted RBP16.18■□□□□ 0.18
CCT3-203ENST00000368258 NLRP13Q86W25 1043 aa16.17■□□□□ 0.18
CCT3-203ENST00000368258 JPH4Q96JJ6 628 aa16.16■□□□□ 0.18
CCT3-203ENST00000368258 KIAA0586Q9BVV6 1533 aa16.16■□□□□ 0.18
CCT3-203ENST00000368258 FAM43AQ8N2R8 423 aa16.16■□□□□ 0.18
CCT3-203ENST00000368258 RSPH6AQ9H0K4 717 aa16.16■□□□□ 0.18
CCT3-203ENST00000368258 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.16■□□□□ 0.18
CCT3-203ENST00000368258 ITSN2Q9NZM3 1697 aa16.15■□□□□ 0.18
CCT3-203ENST00000368258 KDM2BQ8NHM5 1336 aa16.14■□□□□ 0.17
CCT3-203ENST00000368258 KDM5DQ9BY66 1539 aa16.14■□□□□ 0.17
CCT3-203ENST00000368258 FRAT1Q92837 279 aaPredicted RBP16.14■□□□□ 0.17
CCT3-203ENST00000368258 CENPQQ7L2Z9 268 aaPredicted RBP16.1■□□□□ 0.17
CCT3-203ENST00000368258 CAMSAP2Q08AD1 1489 aa16.1■□□□□ 0.17
CCT3-203ENST00000368258 LAMC1P11047 1609 aa16.09■□□□□ 0.17
CCT3-203ENST00000368258 VIRMAQ69YN4 1812 aaKnown RBP16.09■□□□□ 0.17
CCT3-203ENST00000368258 FAM161AQ3B820 660 aa16.09■□□□□ 0.17
CCT3-203ENST00000368258 DAXXQ9UER7 740 aaPredicted RBP16.09■□□□□ 0.17
CCT3-203ENST00000368258 ABCC10Q5T3U5 1492 aa16.09■□□□□ 0.17
CCT3-203ENST00000368258 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
CCT3-203ENST00000368258 CRBNQ96SW2 442 aa16.08■□□□□ 0.17
CCT3-203ENST00000368258 POLR3GLQ9BT43 218 aa16.08■□□□□ 0.17
CCT3-203ENST00000368258 CARD11Q9BXL7 1154 aa16.08■□□□□ 0.17
CCT3-203ENST00000368258 DIP2BQ9P265 1576 aa16.07■□□□□ 0.16
CCT3-203ENST00000368258 SHANK2Q9UPX8 1470 aa16.06■□□□□ 0.16
CCT3-203ENST00000368258 NPM1P06748 294 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCT3-203ENST00000368258 NUP153P49790 1475 aaKnown RBP16.05■□□□□ 0.16
CCT3-203ENST00000368258 RAPGEF6Q8TEU7 1601 aa16.05■□□□□ 0.16
CCT3-203ENST00000368258 C8orf34Q49A92 452 aa16.05■□□□□ 0.16
CCT3-203ENST00000368258 TRPM1Q7Z4N2 1603 aa16.04■□□□□ 0.16
CCT3-203ENST00000368258 PKD2Q13563 968 aa16.04■□□□□ 0.16
CCT3-203ENST00000368258 ANKRD30AQ9BXX3 1397 aa16.04■□□□□ 0.16
CCT3-203ENST00000368258 KIAA0556O60303 1618 aa16.04■□□□□ 0.16
CCT3-203ENST00000368258 ST20-MTHFSA0A0A6YYL1 179 aa16.03■□□□□ 0.16
CCT3-203ENST00000368258 PTPRGP23470 1445 aa16.03■□□□□ 0.16
CCT3-203ENST00000368258 TROQ12816 1431 aaPredicted RBP16.03■□□□□ 0.16
CCT3-203ENST00000368258 COL17A1Q9UMD9 1497 aaPredicted RBP16.02■□□□□ 0.16
CCT3-203ENST00000368258 PER1O15534 1290 aaPredicted RBP16.02■□□□□ 0.16
CCT3-203ENST00000368258 CDCA7LQ96GN5 454 aa16.02■□□□□ 0.16
CCT3-203ENST00000368258 ANKRD50Q9ULJ7 1429 aa16.02■□□□□ 0.16
CCT3-203ENST00000368258 ZNF644Q9H582 1327 aaPredicted RBP16.02■□□□□ 0.15
CCT3-203ENST00000368258 CNGB1Q14028 1251 aaPredicted RBP16.01■□□□□ 0.15
CCT3-203ENST00000368258 GPRASP1Q5JY77 1395 aa16.01■□□□□ 0.15
CCT3-203ENST00000368258 CARMIL2Q6F5E8 1435 aa16.01■□□□□ 0.15
CCT3-203ENST00000368258 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
CCT3-203ENST00000368258 GPATCH8Q9UKJ3 1502 aaKnown RBP16■□□□□ 0.15
CCT3-203ENST00000368258 EIF3AQ14152 1382 aaKnown RBP16■□□□□ 0.15
CCT3-203ENST00000368258 SENP3-EIF4A1A0A087X0R7 540 aa15.99■□□□□ 0.15
CCT3-203ENST00000368258 PLIN1O60240 522 aa15.98■□□□□ 0.15
CCT3-203ENST00000368258 FRAT2O75474 233 aaPredicted RBP15.98■□□□□ 0.15
CCT3-203ENST00000368258 PRDM15P57071 1507 aaPredicted RBP15.97■□□□□ 0.15
CCT3-203ENST00000368258 DISP1Q96F81 1524 aa15.97■□□□□ 0.15
CCT3-203ENST00000368258 EIF5BO60841 1220 aaKnown RBP15.97■□□□□ 0.15
CCT3-203ENST00000368258 PRAG1Q86YV5 1406 aa15.97■□□□□ 0.15
CCT3-203ENST00000368258 UHRF1BP1LA0JNW5 1464 aa15.96■□□□□ 0.15
CCT3-203ENST00000368258 SLC4A3P48751 1232 aa15.96■□□□□ 0.15
CCT3-203ENST00000368258 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.96■□□□□ 0.15
CCT3-203ENST00000368258 FAM69CQ0P6D2 419 aa15.95■□□□□ 0.14
CCT3-203ENST00000368258 CDC42BPAQ5VT25 1732 aa15.95■□□□□ 0.14
CCT3-203ENST00000368258 L1TD1Q5T7N2 865 aaKnown RBP15.95■□□□□ 0.14
CCT3-203ENST00000368258 DCAF11Q8TEB1 546 aa15.95■□□□□ 0.14
CCT3-203ENST00000368258 GLI2P10070 1586 aa15.94■□□□□ 0.14
CCT3-203ENST00000368258 ABCC2Q92887 1545 aa15.94■□□□□ 0.14
CCT3-203ENST00000368258 EIF2AK4Q9P2K8 1649 aaKnown RBP15.94■□□□□ 0.14
CCT3-203ENST00000368258 ZNF521Q96K83 1311 aa15.93■□□□□ 0.14
CCT3-203ENST00000368258 SKAP1Q86WV1 359 aa15.93■□□□□ 0.14
CCT3-203ENST00000368258 CFDP1Q9UEE9 299 aaPredicted RBP15.93■□□□□ 0.14
CCT3-203ENST00000368258 NUP155O75694 1391 aa15.92■□□□□ 0.14
CCT3-203ENST00000368258 C20orf194Q5TEA3 1177 aa15.92■□□□□ 0.14
CCT3-203ENST00000368258 PLB1Q6P1J6 1458 aa15.92■□□□□ 0.14
CCT3-203ENST00000368258 ZMYM3Q14202 1370 aa15.92■□□□□ 0.14
CCT3-203ENST00000368258 DUSP27Q5VZP5 1158 aa15.91■□□□□ 0.14
CCT3-203ENST00000368258 C9orf84Q5VXU9 1444 aa15.9■□□□□ 0.14
CCT3-203ENST00000368258 ARHGEF5Q12774 1597 aa15.89■□□□□ 0.13
CCT3-203ENST00000368258 CCDC144AA2RUR9 1427 aa15.89■□□□□ 0.13
CCT3-203ENST00000368258 USP19O94966 1318 aa15.88■□□□□ 0.13
CCT3-203ENST00000368258 BECN1Q14457 450 aa15.88■□□□□ 0.13
CCT3-203ENST00000368258 NINLQ9Y2I6 1382 aa15.88■□□□□ 0.13
CCT3-203ENST00000368258 PLEKHH1Q9ULM0 1364 aa15.87■□□□□ 0.13
CCT3-203ENST00000368258 ERBINQ96RT1 1412 aa15.87■□□□□ 0.13
CCT3-203ENST00000368258 TSPOAP1O95153 1857 aa15.86■□□□□ 0.13
CCT3-203ENST00000368258 NLRP1Q9C000 1473 aa15.86■□□□□ 0.13
CCT3-203ENST00000368258 GLIPR1L2Q4G1C9 344 aa15.86■□□□□ 0.13
CCT3-203ENST00000368258 RNF17Q9BXT8 1623 aaKnown RBP15.86■□□□□ 0.13
CCT3-203ENST00000368258 TRMT2AQ8IZ69 625 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms