RNA–Protein interactions for RNA: ENST00000368258.7

CCT3-203, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-203ENST00000368258 NISCHQ9Y2I1 1504 aa23.8■■□□□ 1.4
CCT3-203ENST00000368258 CCDC180Q9P1Z9 1646 aa20.98■□□□□ 0.95
CCT3-203ENST00000368258 HRCP23327 699 aa20.74■□□□□ 0.91
CCT3-203ENST00000368258 ABCC9O60706 1549 aa20.73■□□□□ 0.91
CCT3-203ENST00000368258 SHROOM4Q9ULL8 1493 aa20.4■□□□□ 0.86
CCT3-203ENST00000368258 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
CCT3-203ENST00000368258 SUPT5HO00267 1087 aaKnown RBP20.3■□□□□ 0.84
CCT3-203ENST00000368258 ZCCHC6Q5VYS8 1495 aaKnown RBP20.3■□□□□ 0.84
CCT3-203ENST00000368258 CHIC1Q5VXU3 224 aa20.22■□□□□ 0.83
CCT3-203ENST00000368258 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
CCT3-203ENST00000368258 PCGF6Q9BYE7 350 aa20.11■□□□□ 0.81
CCT3-203ENST00000368258 PELP1Q8IZL8 1130 aaKnown RBP20.08■□□□□ 0.81
CCT3-203ENST00000368258 PPARGC1BQ86YN6 1023 aaKnown RBP19.96■□□□□ 0.79
CCT3-203ENST00000368258 RB1CC1Q8TDY2 1594 aa19.92■□□□□ 0.78
CCT3-203ENST00000368258 NACADO15069 1562 aa19.79■□□□□ 0.76
CCT3-203ENST00000368258 TRIM26Q12899 539 aaPredicted RBP19.75■□□□□ 0.75
CCT3-203ENST00000368258 ZEB1P37275 1124 aaPredicted RBP19.71■□□□□ 0.75
CCT3-203ENST00000368258 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
CCT3-203ENST00000368258 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
CCT3-203ENST00000368258 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
CCT3-203ENST00000368258 UNC13AQ9UPW8 1703 aa19.43■□□□□ 0.7
CCT3-203ENST00000368258 MYT1Q01538 1121 aa19.37■□□□□ 0.69
CCT3-203ENST00000368258 DCAF8L2P0C7V8 631 aa19.28■□□□□ 0.68
CCT3-203ENST00000368258 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
CCT3-203ENST00000368258 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
CCT3-203ENST00000368258 ACIN1Q9UKV3 1341 aaKnown RBP19.09■□□□□ 0.65
CCT3-203ENST00000368258 RSF1Q96T23 1441 aaPredicted RBP19.02■□□□□ 0.64
CCT3-203ENST00000368258 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
CCT3-203ENST00000368258 NEUROD1Q13562 356 aa18.91■□□□□ 0.62
CCT3-203ENST00000368258 CENPBP07199 599 aaPredicted RBP18.9■□□□□ 0.62
CCT3-203ENST00000368258 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
CCT3-203ENST00000368258 CC2D2AQ9P2K1 1620 aa18.83■□□□□ 0.6
CCT3-203ENST00000368258 EIF4G1Q04637 1599 aaKnown RBP18.8■□□□□ 0.6
CCT3-203ENST00000368258 GTF3C3Q9Y5Q9 886 aa18.79■□□□□ 0.6
CCT3-203ENST00000368258 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
CCT3-203ENST00000368258 DIEXFQ68CQ4 756 aaKnown RBP18.75■□□□□ 0.59
CCT3-203ENST00000368258 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
CCT3-203ENST00000368258 WRNQ14191 1432 aaPredicted RBP eCLIP18.68■□□□□ 0.58
CCT3-203ENST00000368258 FAM9AQ8IZU1 332 aaPredicted RBP18.67■□□□□ 0.58
CCT3-203ENST00000368258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.66■□□□□ 0.58
CCT3-203ENST00000368258 ZNF316A6NFI3 1004 aaPredicted RBP18.5■□□□□ 0.55
CCT3-203ENST00000368258 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
CCT3-203ENST00000368258 MROH2BQ7Z745 1585 aa18.46■□□□□ 0.55
CCT3-203ENST00000368258 WIZO95785 1651 aa18.39■□□□□ 0.53
CCT3-203ENST00000368258 CEP162Q5TB80 1403 aa18.38■□□□□ 0.53
CCT3-203ENST00000368258 TNIKQ9UKE5 1360 aa18.37■□□□□ 0.53
CCT3-203ENST00000368258 CLSPNQ9HAW4 1339 aa18.37■□□□□ 0.53
CCT3-203ENST00000368258 EHMT2Q96KQ7 1210 aa18.35■□□□□ 0.53
CCT3-203ENST00000368258 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
CCT3-203ENST00000368258 EEA1Q15075 1411 aa18.34■□□□□ 0.53
CCT3-203ENST00000368258 MIER1Q8N108 512 aa18.22■□□□□ 0.51
CCT3-203ENST00000368258 TOP2AP11388 1531 aaKnown RBP18.22■□□□□ 0.51
CCT3-203ENST00000368258 TTBK1Q5TCY1 1321 aaPredicted RBP18.21■□□□□ 0.51
CCT3-203ENST00000368258 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
CCT3-203ENST00000368258 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
CCT3-203ENST00000368258 YTHDC1Q96MU7 727 aaKnown RBP18.16■□□□□ 0.5
CCT3-203ENST00000368258 GOLGA3Q08378 1498 aa18.15■□□□□ 0.5
CCT3-203ENST00000368258 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
CCT3-203ENST00000368258 SMARCA2P51531 1590 aa18.14■□□□□ 0.49
CCT3-203ENST00000368258 HMGXB3Q12766 1538 aa18.14■□□□□ 0.49
CCT3-203ENST00000368258 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
CCT3-203ENST00000368258 ATAD2BQ9ULI0 1458 aa18.1■□□□□ 0.49
CCT3-203ENST00000368258 SOGA1O94964 1423 aa18.09■□□□□ 0.49
CCT3-203ENST00000368258 CUX2O14529 1486 aa18.09■□□□□ 0.49
CCT3-203ENST00000368258 CSRNP3Q8WYN3 585 aa18.07■□□□□ 0.48
CCT3-203ENST00000368258 KIF21BO75037 1637 aa18.05■□□□□ 0.48
CCT3-203ENST00000368258 PEG3Q9GZU2 1588 aa18.02■□□□□ 0.47
CCT3-203ENST00000368258 SUPT16HQ9Y5B9 1047 aaKnown RBP18.01■□□□□ 0.47
CCT3-203ENST00000368258 CEP164Q9UPV0 1460 aa17.99■□□□□ 0.47
CCT3-203ENST00000368258 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
CCT3-203ENST00000368258 VPS8Q8N3P4 1428 aa17.97■□□□□ 0.47
CCT3-203ENST00000368258 ANP32EQ9BTT0 268 aa17.96■□□□□ 0.47
CCT3-203ENST00000368258 BAZ1BQ9UIG0 1483 aaKnown RBP17.96■□□□□ 0.47
CCT3-203ENST00000368258 RUSC2Q8N2Y8 1516 aa17.95■□□□□ 0.46
CCT3-203ENST00000368258 UBTFP17480 764 aaKnown RBP17.93■□□□□ 0.46
CCT3-203ENST00000368258 TSHZ2Q9NRE2 1034 aa17.9■□□□□ 0.46
CCT3-203ENST00000368258 CLIP1P30622 1438 aa17.9■□□□□ 0.46
CCT3-203ENST00000368258 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
CCT3-203ENST00000368258 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
CCT3-203ENST00000368258 DHX57Q6P158 1386 aaKnown RBP17.84■□□□□ 0.45
CCT3-203ENST00000368258 NESP48681 1621 aa17.78■□□□□ 0.44
CCT3-203ENST00000368258 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
CCT3-203ENST00000368258 BCL11AQ9H165 835 aa17.75■□□□□ 0.43
CCT3-203ENST00000368258 SYNJ1O43426 1573 aa17.74■□□□□ 0.43
CCT3-203ENST00000368258 APLP2Q06481 763 aa17.74■□□□□ 0.43
CCT3-203ENST00000368258 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
CCT3-203ENST00000368258 RRBP1Q9P2E9 1410 aaKnown RBP17.69■□□□□ 0.42
CCT3-203ENST00000368258 KIF21AQ7Z4S6 1674 aa17.68■□□□□ 0.42
CCT3-203ENST00000368258 RAPGEF2Q9Y4G8 1499 aa17.66■□□□□ 0.42
CCT3-203ENST00000368258 ERICH3Q5RHP9 1530 aa17.66■□□□□ 0.42
CCT3-203ENST00000368258 CADPSQ9ULU8 1353 aa17.6■□□□□ 0.41
CCT3-203ENST00000368258 ARAP1Q96P48 1450 aa17.58■□□□□ 0.4
CCT3-203ENST00000368258 MRC2Q9UBG0 1479 aa17.55■□□□□ 0.4
CCT3-203ENST00000368258 TOP2BQ02880 1626 aa17.55■□□□□ 0.4
CCT3-203ENST00000368258 WDR62O43379 1518 aa17.54■□□□□ 0.4
CCT3-203ENST00000368258 PRXQ9BXM0 1461 aa17.53■□□□□ 0.4
CCT3-203ENST00000368258 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.4
CCT3-203ENST00000368258 MAPKBP1O60336 1514 aa17.49■□□□□ 0.39
CCT3-203ENST00000368258 AEBP2Q6ZN18 517 aaPredicted RBP17.49■□□□□ 0.39
CCT3-203ENST00000368258 CCNB3Q8WWL7 1395 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms