RNA–Protein interactions for RNA: ENST00000365052.1

RNU1-43P-201, Transcript of RNA, U1 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU1-43P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-43P-201ENST00000365052 PTPRKQ15262 1439 aa8.19□□□□□ -1.1
RNU1-43P-201ENST00000365052 MROH2AA6NES4 1674 aa8.18□□□□□ -1.1
RNU1-43P-201ENST00000365052 CFAP65Q6ZU64 1925 aaKnown RBP8.18□□□□□ -1.1
RNU1-43P-201ENST00000365052 PTPN23Q9H3S7 1636 aa8.18□□□□□ -1.1
RNU1-43P-201ENST00000365052 ITGAEP38570 1179 aa8.17□□□□□ -1.1
RNU1-43P-201ENST00000365052 ABCC5O15440 1437 aa8.17□□□□□ -1.1
RNU1-43P-201ENST00000365052 NPATQ14207 1427 aa8.17□□□□□ -1.1
RNU1-43P-201ENST00000365052 CAMSAP1Q5T5Y3 1602 aa8.17□□□□□ -1.1
RNU1-43P-201ENST00000365052 FGD6Q6ZV73 1430 aa8.16□□□□□ -1.1
RNU1-43P-201ENST00000365052 DAPK1P53355 1430 aa8.15□□□□□ -1.1
RNU1-43P-201ENST00000365052 TNRQ92752 1358 aa8.15□□□□□ -1.1
RNU1-43P-201ENST00000365052 MAST1Q9Y2H9 1570 aa8.14□□□□□ -1.11
RNU1-43P-201ENST00000365052 PTPRTO14522 1441 aa8.14□□□□□ -1.11
RNU1-43P-201ENST00000365052 NCOA1Q15788 1441 aa8.14□□□□□ -1.11
RNU1-43P-201ENST00000365052 KIF15Q9NS87 1388 aa8.14□□□□□ -1.11
RNU1-43P-201ENST00000365052 PKD2Q13563 968 aa8.14□□□□□ -1.11
RNU1-43P-201ENST00000365052 KDM5DQ9BY66 1539 aa8.13□□□□□ -1.11
RNU1-43P-201ENST00000365052 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.13□□□□□ -1.11
RNU1-43P-201ENST00000365052 ZNF335Q9H4Z2 1342 aaPredicted RBP8.13□□□□□ -1.11
RNU1-43P-201ENST00000365052 ANKLE2Q86XL3 938 aa8.13□□□□□ -1.11
RNU1-43P-201ENST00000365052 THEMISQ8N1K5 641 aaPredicted RBP8.13□□□□□ -1.11
RNU1-43P-201ENST00000365052 MYO3AQ8NEV4 1616 aa8.13□□□□□ -1.11
RNU1-43P-201ENST00000365052 DUOX2Q9NRD8 1548 aa8.13□□□□□ -1.11
RNU1-43P-201ENST00000365052 TCOF1Q13428 1488 aaKnown RBP8.13□□□□□ -1.11
RNU1-43P-201ENST00000365052 ANKRD30AQ9BXX3 1397 aa8.12□□□□□ -1.11
RNU1-43P-201ENST00000365052 CEP170BQ9Y4F5 1589 aaPredicted RBP8.12□□□□□ -1.11
RNU1-43P-201ENST00000365052 A2ML1A8K2U0 1454 aa8.12□□□□□ -1.11
RNU1-43P-201ENST00000365052 PZPP20742 1482 aa8.12□□□□□ -1.11
RNU1-43P-201ENST00000365052 CEP152O94986 1710 aa8.12□□□□□ -1.11
RNU1-43P-201ENST00000365052 DNMT1P26358 1616 aaKnown RBP8.11□□□□□ -1.11
RNU1-43P-201ENST00000365052 STAG3Q9UJ98 1225 aa8.11□□□□□ -1.11
RNU1-43P-201ENST00000365052 KANK1Q14678 1352 aa8.1□□□□□ -1.11
RNU1-43P-201ENST00000365052 SENP3Q9H4L4 574 aaPredicted RBP8.1□□□□□ -1.11
RNU1-43P-201ENST00000365052 CROCC2H7BZ55 1655 aa8.1□□□□□ -1.11
RNU1-43P-201ENST00000365052 ABCC3O15438 1527 aa8.09□□□□□ -1.11
RNU1-43P-201ENST00000365052 ZNF142P52746 1687 aaPredicted RBP8.09□□□□□ -1.11
RNU1-43P-201ENST00000365052 MROH1Q8NDA8 1641 aa8.09□□□□□ -1.11
RNU1-43P-201ENST00000365052 RNF17Q9BXT8 1623 aaKnown RBP8.09□□□□□ -1.11
RNU1-43P-201ENST00000365052 EIF2AK4Q9P2K8 1649 aaKnown RBP8.09□□□□□ -1.11
RNU1-43P-201ENST00000365052 UGGT1Q9NYU2 1555 aa8.09□□□□□ -1.11
RNU1-43P-201ENST00000365052 SHANK2Q9UPX8 1470 aa8.08□□□□□ -1.12
RNU1-43P-201ENST00000365052 UBAP1LF5GYI3 381 aa8.08□□□□□ -1.12
RNU1-43P-201ENST00000365052 IDI1Q13907 227 aa8.08□□□□□ -1.12
RNU1-43P-201ENST00000365052 TXNDC2Q86VQ3 553 aa8.08□□□□□ -1.12
RNU1-43P-201ENST00000365052 ERBINQ96RT1 1412 aa8.08□□□□□ -1.12
RNU1-43P-201ENST00000365052 FAM135AQ9P2D6 1515 aa8.08□□□□□ -1.12
RNU1-43P-201ENST00000365052 LTBP4Q8N2S1 1624 aa8.07□□□□□ -1.12
RNU1-43P-201ENST00000365052 ERVK-7P63135 1459 aa8.07□□□□□ -1.12
RNU1-43P-201ENST00000365052 PLA2R1Q13018 1463 aa8.07□□□□□ -1.12
RNU1-43P-201ENST00000365052 CHGAP10645 457 aaKnown RBP8.07□□□□□ -1.12
RNU1-43P-201ENST00000365052 LTKP29376 864 aa8.07□□□□□ -1.12
RNU1-43P-201ENST00000365052 NLRP1Q9C000 1473 aa8.06□□□□□ -1.12
RNU1-43P-201ENST00000365052 SCAF1Q9H7N4 1312 aaKnown RBP8.06□□□□□ -1.12
RNU1-43P-201ENST00000365052 ZC3H13Q5T200 1668 aaKnown RBP8.06□□□□□ -1.12
RNU1-43P-201ENST00000365052 BCANQ96GW7 911 aa8.06□□□□□ -1.12
RNU1-43P-201ENST00000365052 SPATA31D1Q6ZQQ2 1576 aa8.05□□□□□ -1.12
RNU1-43P-201ENST00000365052 NPHP4O75161 1426 aaPredicted RBP8.05□□□□□ -1.12
RNU1-43P-201ENST00000365052 ANKRD50Q9ULJ7 1429 aa8.05□□□□□ -1.12
RNU1-43P-201ENST00000365052 PIP4K2BP78356 416 aa8.05□□□□□ -1.12
RNU1-43P-201ENST00000365052 EID1Q9Y6B2 187 aa8.05□□□□□ -1.12
RNU1-43P-201ENST00000365052 ADGRL2O95490 1459 aa8.04□□□□□ -1.12
RNU1-43P-201ENST00000365052 ARHGAP31Q2M1Z3 1444 aa8.03□□□□□ -1.12
RNU1-43P-201ENST00000365052 PRDM15P57071 1507 aaPredicted RBP8.03□□□□□ -1.12
RNU1-43P-201ENST00000365052 POLR1AO95602 1720 aaPredicted RBP8.03□□□□□ -1.12
RNU1-43P-201ENST00000365052 NEURL4Q96JN8 1562 aa8.03□□□□□ -1.12
RNU1-43P-201ENST00000365052 NUTM2DQ5VT03 806 aaPredicted RBP8.03□□□□□ -1.12
RNU1-43P-201ENST00000365052 SLC26A8Q96RN1 970 aa8.03□□□□□ -1.12
RNU1-43P-201ENST00000365052 NUP155O75694 1391 aa8.02□□□□□ -1.13
RNU1-43P-201ENST00000365052 UBR1Q8IWV7 1749 aa8.02□□□□□ -1.13
RNU1-43P-201ENST00000365052 PIK3C2BO00750 1634 aa8.02□□□□□ -1.13
RNU1-43P-201ENST00000365052 DEPDC5O75140 1603 aa8.02□□□□□ -1.13
RNU1-43P-201ENST00000365052 TOM1O60784 492 aa8.01□□□□□ -1.13
RNU1-43P-201ENST00000365052 TRIM52Q96A61 297 aa8.01□□□□□ -1.13
RNU1-43P-201ENST00000365052 RBM33Q96EV2 1170 aaKnown RBP8.01□□□□□ -1.13
RNU1-43P-201ENST00000365052 SLC52A1Q9NWF4 448 aa8.01□□□□□ -1.13
RNU1-43P-201ENST00000365052 VWDEQ8N2E2 1590 aa8.01□□□□□ -1.13
RNU1-43P-201ENST00000365052 MED14O60244 1454 aa8□□□□□ -1.13
RNU1-43P-201ENST00000365052 ROCK1Q13464 1354 aa8□□□□□ -1.13
RNU1-43P-201ENST00000365052 LMTK2Q8IWU2 1503 aa8□□□□□ -1.13
RNU1-43P-201ENST00000365052 TMEM2Q9UHN6 1383 aa7.99□□□□□ -1.13
RNU1-43P-201ENST00000365052 IQGAP1P46940 1657 aa7.99□□□□□ -1.13
RNU1-43P-201ENST00000365052 SYNMO15061 1565 aa7.99□□□□□ -1.13
RNU1-43P-201ENST00000365052 PPP1R15AO75807 674 aaPredicted RBP7.99□□□□□ -1.13
RNU1-43P-201ENST00000365052 NOS1P29475 1434 aa7.99□□□□□ -1.13
RNU1-43P-201ENST00000365052 PROSER2Q86WR7 435 aaPredicted RBP7.99□□□□□ -1.13
RNU1-43P-201ENST00000365052 SCAF11Q99590 1463 aaKnown RBP7.99□□□□□ -1.13
RNU1-43P-201ENST00000365052 DISP3Q9P2K9 1392 aa7.98□□□□□ -1.13
RNU1-43P-201ENST00000365052 STRCP1A6NGW2 1772 aa7.98□□□□□ -1.13
RNU1-43P-201ENST00000365052 HSPA1LP34931 641 aa7.98□□□□□ -1.13
RNU1-43P-201ENST00000365052 IQSEC2Q5JU85 1478 aa7.98□□□□□ -1.13
RNU1-43P-201ENST00000365052 ARHGAP23Q9P227 1491 aa7.98□□□□□ -1.13
RNU1-43P-201ENST00000365052 EFCAB6Q5THR3 1501 aa7.98□□□□□ -1.13
RNU1-43P-201ENST00000365052 HDGFP51858 240 aaKnown RBP7.97□□□□□ -1.13
RNU1-43P-201ENST00000365052 ZNF326Q5BKZ1 582 aaKnown RBP7.97□□□□□ -1.13
RNU1-43P-201ENST00000365052 SLIT1O75093 1534 aa7.97□□□□□ -1.13
RNU1-43P-201ENST00000365052 CPS1P31327 1500 aa7.97□□□□□ -1.13
RNU1-43P-201ENST00000365052 MYO5BQ9ULV0 1848 aa7.96□□□□□ -1.13
RNU1-43P-201ENST00000365052 E9PCH4 1651 aa7.96□□□□□ -1.13
RNU1-43P-201ENST00000365052 TET3O43151 1660 aa7.96□□□□□ -1.13
RNU1-43P-201ENST00000365052 KCNA6P17658 529 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms