RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ILDR1Q86SU0 546 aaPredicted RBP18.61■□□□□ 0.57
NIF3L1-201ENST00000359683 FER1L4A9Z1Z3 1794 aa18.6■□□□□ 0.57
NIF3L1-201ENST00000359683 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
NIF3L1-201ENST00000359683 REREQ9P2R6 1566 aa18.59■□□□□ 0.57
NIF3L1-201ENST00000359683 SETD5Q9C0A6 1442 aa18.59■□□□□ 0.57
NIF3L1-201ENST00000359683 ERBINQ96RT1 1412 aa18.58■□□□□ 0.56
NIF3L1-201ENST00000359683 GCC2Q8IWJ2 1684 aa18.57■□□□□ 0.56
NIF3L1-201ENST00000359683 LMTK3Q96Q04 1460 aa18.55■□□□□ 0.56
NIF3L1-201ENST00000359683 HRCP23327 699 aa18.55■□□□□ 0.56
NIF3L1-201ENST00000359683 AGLP35573 1532 aa18.54■□□□□ 0.56
NIF3L1-201ENST00000359683 KIF3BO15066 747 aa18.53■□□□□ 0.56
NIF3L1-201ENST00000359683 RAB3GAP2Q9H2M9 1393 aa18.53■□□□□ 0.56
NIF3L1-201ENST00000359683 EIF2AK4Q9P2K8 1649 aaKnown RBP18.52■□□□□ 0.55
NIF3L1-201ENST00000359683 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
NIF3L1-201ENST00000359683 MLECQ14165 292 aa18.49■□□□□ 0.55
NIF3L1-201ENST00000359683 PLPPR3Q6T4P5 718 aa18.48■□□□□ 0.55
NIF3L1-201ENST00000359683 GGT6Q6P531 493 aa18.46■□□□□ 0.55
NIF3L1-201ENST00000359683 RNF17Q9BXT8 1623 aaKnown RBP18.46■□□□□ 0.55
NIF3L1-201ENST00000359683 DEPDC5O75140 1603 aa18.45■□□□□ 0.54
NIF3L1-201ENST00000359683 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
NIF3L1-201ENST00000359683 UNC13BO14795 1591 aa18.44■□□□□ 0.54
NIF3L1-201ENST00000359683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.44■□□□□ 0.54
NIF3L1-201ENST00000359683 MROH1Q8NDA8 1641 aa18.43■□□□□ 0.54
NIF3L1-201ENST00000359683 PREX1Q8TCU6 1659 aa18.43■□□□□ 0.54
NIF3L1-201ENST00000359683 TRIM52Q96A61 297 aa18.42■□□□□ 0.54
NIF3L1-201ENST00000359683 NUP155O75694 1391 aa18.42■□□□□ 0.54
NIF3L1-201ENST00000359683 PRDM15P57071 1507 aaPredicted RBP18.41■□□□□ 0.54
NIF3L1-201ENST00000359683 VWDEQ8N2E2 1590 aa18.4■□□□□ 0.54
NIF3L1-201ENST00000359683 KANK1Q14678 1352 aa18.4■□□□□ 0.54
NIF3L1-201ENST00000359683 KDM5DQ9BY66 1539 aa18.39■□□□□ 0.54
NIF3L1-201ENST00000359683 HSPA2P54652 639 aa18.39■□□□□ 0.53
NIF3L1-201ENST00000359683 WASHC2CQ9Y4E1 1318 aa18.38■□□□□ 0.53
NIF3L1-201ENST00000359683 IQGAP3Q86VI3 1631 aa18.36■□□□□ 0.53
NIF3L1-201ENST00000359683 FAM135AQ9P2D6 1515 aa18.36■□□□□ 0.53
NIF3L1-201ENST00000359683 MPHOSPH9Q99550 1183 aa18.36■□□□□ 0.53
NIF3L1-201ENST00000359683 PZPP20742 1482 aa18.36■□□□□ 0.53
NIF3L1-201ENST00000359683 C3P01024 1663 aa18.35■□□□□ 0.53
NIF3L1-201ENST00000359683 LMTK2Q8IWU2 1503 aa18.35■□□□□ 0.53
NIF3L1-201ENST00000359683 ABCC3O15438 1527 aa18.34■□□□□ 0.53
NIF3L1-201ENST00000359683 SLC4A1APQ9BWU0 796 aaKnown RBP18.34■□□□□ 0.53
NIF3L1-201ENST00000359683 FBXO41Q8TF61 875 aa18.33■□□□□ 0.52
NIF3L1-201ENST00000359683 ESF1Q9H501 851 aaKnown RBP18.32■□□□□ 0.52
NIF3L1-201ENST00000359683 ZC3H13Q5T200 1668 aaKnown RBP18.32■□□□□ 0.52
NIF3L1-201ENST00000359683 CNTLNQ9NXG0 1405 aa18.32■□□□□ 0.52
NIF3L1-201ENST00000359683 CEP152O94986 1710 aa18.31■□□□□ 0.52
NIF3L1-201ENST00000359683 CEBPAP49715 358 aaPredicted RBP18.31■□□□□ 0.52
NIF3L1-201ENST00000359683 PKD2Q13563 968 aa18.3■□□□□ 0.52
NIF3L1-201ENST00000359683 SETD1BQ9UPS6 1966 aaKnown RBP18.3■□□□□ 0.52
NIF3L1-201ENST00000359683 TET3O43151 1660 aa18.29■□□□□ 0.52
NIF3L1-201ENST00000359683 DHX57Q6P158 1386 aaKnown RBP18.29■□□□□ 0.52
NIF3L1-201ENST00000359683 ARHGAP31Q2M1Z3 1444 aa18.29■□□□□ 0.52
NIF3L1-201ENST00000359683 CLTCQ00610 1675 aaKnown RBP18.29■□□□□ 0.52
NIF3L1-201ENST00000359683 ZMYM3Q14202 1370 aa18.28■□□□□ 0.52
NIF3L1-201ENST00000359683 UHRF1BP1Q6BDS2 1440 aa18.28■□□□□ 0.52
NIF3L1-201ENST00000359683 STRCQ7RTU9 1775 aa18.27■□□□□ 0.51
NIF3L1-201ENST00000359683 CAMSAP1Q5T5Y3 1602 aa18.27■□□□□ 0.51
NIF3L1-201ENST00000359683 EFCAB6Q5THR3 1501 aa18.26■□□□□ 0.51
NIF3L1-201ENST00000359683 MROH2AA6NES4 1674 aa18.26■□□□□ 0.51
NIF3L1-201ENST00000359683 NPATQ14207 1427 aa18.25■□□□□ 0.51
NIF3L1-201ENST00000359683 RPRD2Q5VT52 1461 aaKnown RBP18.24■□□□□ 0.51
NIF3L1-201ENST00000359683 E9PCH4 1651 aa18.24■□□□□ 0.51
NIF3L1-201ENST00000359683 FBXO31Q5XUX0 539 aaPredicted RBP18.2■□□□□ 0.5
NIF3L1-201ENST00000359683 PTPRTO14522 1441 aa18.2■□□□□ 0.5
NIF3L1-201ENST00000359683 NOS1P29475 1434 aa18.19■□□□□ 0.5
NIF3L1-201ENST00000359683 ANKRD30BQ9BXX2 1392 aa18.19■□□□□ 0.5
NIF3L1-201ENST00000359683 CFAP65Q6ZU64 1925 aaKnown RBP18.18■□□□□ 0.5
NIF3L1-201ENST00000359683 PLA2R1Q13018 1463 aa18.18■□□□□ 0.5
NIF3L1-201ENST00000359683 ERVK-7P63135 1459 aa18.17■□□□□ 0.5
NIF3L1-201ENST00000359683 CCER1Q8TC90 406 aaPredicted RBP18.16■□□□□ 0.5
NIF3L1-201ENST00000359683 SPATA31D1Q6ZQQ2 1576 aa18.16■□□□□ 0.5
NIF3L1-201ENST00000359683 CLSPNQ9HAW4 1339 aa18.14■□□□□ 0.49
NIF3L1-201ENST00000359683 MYO3AQ8NEV4 1616 aa18.14■□□□□ 0.49
NIF3L1-201ENST00000359683 SPHKAPQ2M3C7 1700 aa18.14■□□□□ 0.49
NIF3L1-201ENST00000359683 CERKQ8TCT0 537 aa18.14■□□□□ 0.49
NIF3L1-201ENST00000359683 ZNF142P52746 1687 aaPredicted RBP18.13■□□□□ 0.49
NIF3L1-201ENST00000359683 TRPM2O94759 1503 aa18.13■□□□□ 0.49
NIF3L1-201ENST00000359683 SLC52A1Q9NWF4 448 aa18.12■□□□□ 0.49
NIF3L1-201ENST00000359683 TNRQ92752 1358 aa18.12■□□□□ 0.49
NIF3L1-201ENST00000359683 SYNMO15061 1565 aa18.11■□□□□ 0.49
NIF3L1-201ENST00000359683 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
NIF3L1-201ENST00000359683 IDI1Q13907 227 aa18.09■□□□□ 0.49
NIF3L1-201ENST00000359683 SIN3AQ96ST3 1273 aa18.09■□□□□ 0.49
NIF3L1-201ENST00000359683 CCDC144AA2RUR9 1427 aa18.08■□□□□ 0.49
NIF3L1-201ENST00000359683 CEP170BQ9Y4F5 1589 aaPredicted RBP18.07■□□□□ 0.48
NIF3L1-201ENST00000359683 PIK3C2BO00750 1634 aa18.07■□□□□ 0.48
NIF3L1-201ENST00000359683 UGGT1Q9NYU2 1555 aa18.06■□□□□ 0.48
NIF3L1-201ENST00000359683 CLTCL1P53675 1640 aa18.06■□□□□ 0.48
NIF3L1-201ENST00000359683 NLRP1Q9C000 1473 aa18.05■□□□□ 0.48
NIF3L1-201ENST00000359683 LTBP4Q8N2S1 1624 aa18.03■□□□□ 0.48
NIF3L1-201ENST00000359683 NEUROD1Q13562 356 aa18.03■□□□□ 0.48
NIF3L1-201ENST00000359683 SPATA31E1Q6ZUB1 1445 aa18■□□□□ 0.47
NIF3L1-201ENST00000359683 A2ML1A8K2U0 1454 aa17.99■□□□□ 0.47
NIF3L1-201ENST00000359683 KIF1BO60333 1816 aa17.99■□□□□ 0.47
NIF3L1-201ENST00000359683 NEURL4Q96JN8 1562 aa17.99■□□□□ 0.47
NIF3L1-201ENST00000359683 CHGAP10645 457 aaKnown RBP17.98■□□□□ 0.47
NIF3L1-201ENST00000359683 TMEM131LA2VDJ0 1609 aa17.98■□□□□ 0.47
NIF3L1-201ENST00000359683 STAG3Q9UJ98 1225 aa17.98■□□□□ 0.47
NIF3L1-201ENST00000359683 POLR1AO95602 1720 aaPredicted RBP17.97■□□□□ 0.47
NIF3L1-201ENST00000359683 KDM5AP29375 1690 aaKnown RBP17.97■□□□□ 0.47
NIF3L1-201ENST00000359683 ADGRB3O60242 1522 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms