RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 PLB1Q6P1J6 1458 aa14.54□□□□□ -0.08
RPE-202ENST00000359429 PDE4AP27815 886 aa14.53□□□□□ -0.08
RPE-202ENST00000359429 CDCA7LQ96GN5 454 aa14.53□□□□□ -0.08
RPE-202ENST00000359429 ADGBQ8N7X0 1667 aa14.52□□□□□ -0.08
RPE-202ENST00000359429 TCERG1O14776 1098 aaKnown RBP14.52□□□□□ -0.09
RPE-202ENST00000359429 SKAP1Q86WV1 359 aa14.52□□□□□ -0.09
RPE-202ENST00000359429 BACH2Q9BYV9 841 aa14.51□□□□□ -0.09
RPE-202ENST00000359429 LAS1LQ9Y4W2 734 aaKnown RBP14.5□□□□□ -0.09
RPE-202ENST00000359429 PLIN1O60240 522 aa14.5□□□□□ -0.09
RPE-202ENST00000359429 KTN1Q86UP2 1357 aaKnown RBP14.49□□□□□ -0.09
RPE-202ENST00000359429 NLRP13Q86W25 1043 aa14.49□□□□□ -0.09
RPE-202ENST00000359429 ARHGEF12Q9NZN5 1544 aa14.49□□□□□ -0.09
RPE-202ENST00000359429 CROCC2H7BZ55 1655 aa14.48□□□□□ -0.09
RPE-202ENST00000359429 PARD3Q8TEW0 1356 aa14.48□□□□□ -0.09
RPE-202ENST00000359429 PER1O15534 1290 aaPredicted RBP14.48□□□□□ -0.09
RPE-202ENST00000359429 ITSN2Q9NZM3 1697 aa14.47□□□□□ -0.09
RPE-202ENST00000359429 GRIN2AQ12879 1464 aa14.47□□□□□ -0.09
RPE-202ENST00000359429 C9orf84Q5VXU9 1444 aa14.46□□□□□ -0.09
RPE-202ENST00000359429 E9PCH4 1651 aa14.46□□□□□ -0.09
RPE-202ENST00000359429 NBPF1Q3BBV0 1214 aa14.46□□□□□ -0.09
RPE-202ENST00000359429 IL27Q8NEV9 243 aa14.46□□□□□ -0.09
RPE-202ENST00000359429 PDE3BQ13370 1112 aa14.45□□□□□ -0.1
RPE-202ENST00000359429 NEFMP07197 916 aa14.45□□□□□ -0.1
RPE-202ENST00000359429 MS4A1P11836 297 aa14.44□□□□□ -0.1
RPE-202ENST00000359429 EIF4G3O43432 1585 aaKnown RBP14.44□□□□□ -0.1
RPE-202ENST00000359429 CC2D1BQ5T0F9 858 aaKnown RBP14.44□□□□□ -0.1
RPE-202ENST00000359429 CEP170Q5SW79 1584 aa14.44□□□□□ -0.1
RPE-202ENST00000359429 HNRNPMP52272 730 aaKnown RBP eCLIP14.43□□□□□ -0.1
RPE-202ENST00000359429 CRBNQ96SW2 442 aa14.43□□□□□ -0.1
RPE-202ENST00000359429 ADCY10Q96PN6 1610 aa14.43□□□□□ -0.1
RPE-202ENST00000359429 PTPRGP23470 1445 aa14.42□□□□□ -0.1
RPE-202ENST00000359429 KDM5DQ9BY66 1539 aa14.42□□□□□ -0.1
RPE-202ENST00000359429 TSPY4P0CV99 314 aa14.42□□□□□ -0.1
RPE-202ENST00000359429 TSPY10P0CW01 314 aa14.42□□□□□ -0.1
RPE-202ENST00000359429 RGL3Q3MIN7 710 aa14.42□□□□□ -0.1
RPE-202ENST00000359429 C20orf194Q5TEA3 1177 aa14.41□□□□□ -0.1
RPE-202ENST00000359429 CDC42BPAQ5VT25 1732 aa14.41□□□□□ -0.1
RPE-202ENST00000359429 PRAG1Q86YV5 1406 aa14.4□□□□□ -0.1
RPE-202ENST00000359429 ABCC10Q5T3U5 1492 aa14.4□□□□□ -0.1
RPE-202ENST00000359429 SHANK2Q9UPX8 1470 aa14.4□□□□□ -0.1
RPE-202ENST00000359429 PLEKHD1A6NEE1 506 aa14.4□□□□□ -0.1
RPE-202ENST00000359429 ANO8Q9HCE9 1232 aaPredicted RBP14.39□□□□□ -0.11
RPE-202ENST00000359429 DISP3Q9P2K9 1392 aa14.39□□□□□ -0.11
RPE-202ENST00000359429 TESK2Q96S53 571 aa14.39□□□□□ -0.11
RPE-202ENST00000359429 RTN4Q9NQC3 1192 aaKnown RBP14.38□□□□□ -0.11
RPE-202ENST00000359429 PANK3Q9H999 370 aa14.38□□□□□ -0.11
RPE-202ENST00000359429 BLMP54132 1417 aaPredicted RBP14.38□□□□□ -0.11
RPE-202ENST00000359429 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
RPE-202ENST00000359429 JPH4Q96JJ6 628 aa14.37□□□□□ -0.11
RPE-202ENST00000359429 FBLN2P98095 1184 aa14.37□□□□□ -0.11
RPE-202ENST00000359429 USP35Q9P2H5 1018 aa14.37□□□□□ -0.11
RPE-202ENST00000359429 ATP10BO94823 1461 aa14.36□□□□□ -0.11
RPE-202ENST00000359429 MAGI1Q96QZ7 1491 aaPredicted RBP14.36□□□□□ -0.11
RPE-202ENST00000359429 TRPM1Q7Z4N2 1603 aa14.36□□□□□ -0.11
RPE-202ENST00000359429 SLC4A3P48751 1232 aa14.35□□□□□ -0.11
RPE-202ENST00000359429 FAM135AQ9P2D6 1515 aa14.35□□□□□ -0.11
RPE-202ENST00000359429 DMRT2Q9Y5R5 561 aa14.35□□□□□ -0.11
RPE-202ENST00000359429 PLA2R1Q13018 1463 aa14.35□□□□□ -0.11
RPE-202ENST00000359429 COL17A1Q9UMD9 1497 aaPredicted RBP14.35□□□□□ -0.11
RPE-202ENST00000359429 CCDC144AA2RUR9 1427 aa14.35□□□□□ -0.11
RPE-202ENST00000359429 ADAMTS8Q9UP79 889 aa14.34□□□□□ -0.11
RPE-202ENST00000359429 GPRASP1Q5JY77 1395 aa14.34□□□□□ -0.11
RPE-202ENST00000359429 WASHC2CQ9Y4E1 1318 aa14.34□□□□□ -0.11
RPE-202ENST00000359429 PPM1GO15355 546 aaPredicted RBP14.34□□□□□ -0.11
RPE-202ENST00000359429 KDM2BQ8NHM5 1336 aa14.33□□□□□ -0.12
RPE-202ENST00000359429 A2MP01023 1474 aa14.33□□□□□ -0.12
RPE-202ENST00000359429 CARMIL2Q6F5E8 1435 aa14.32□□□□□ -0.12
RPE-202ENST00000359429 ABCA8O94911 1581 aa14.31□□□□□ -0.12
RPE-202ENST00000359429 INSRP06213 1382 aa14.31□□□□□ -0.12
RPE-202ENST00000359429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.31□□□□□ -0.12
RPE-202ENST00000359429 ERBINQ96RT1 1412 aa14.31□□□□□ -0.12
RPE-202ENST00000359429 PLEKHH1Q9ULM0 1364 aa14.3□□□□□ -0.12
RPE-202ENST00000359429 ZMYM4Q5VZL5 1548 aa14.3□□□□□ -0.12
RPE-202ENST00000359429 SYNJ2O15056 1496 aa14.3□□□□□ -0.12
RPE-202ENST00000359429 DUSP27Q5VZP5 1158 aa14.29□□□□□ -0.12
RPE-202ENST00000359429 DDRGK1Q96HY6 314 aa14.29□□□□□ -0.12
RPE-202ENST00000359429 PRDM15P57071 1507 aaPredicted RBP14.29□□□□□ -0.12
RPE-202ENST00000359429 NFKBIBQ15653 356 aa14.29□□□□□ -0.12
RPE-202ENST00000359429 ARHGEF5Q12774 1597 aa14.28□□□□□ -0.12
RPE-202ENST00000359429 TMF1P82094 1093 aa14.28□□□□□ -0.12
RPE-202ENST00000359429 C8orf34Q49A92 452 aa14.28□□□□□ -0.12
RPE-202ENST00000359429 CCDC141Q6ZP82 1450 aa14.27□□□□□ -0.13
RPE-202ENST00000359429 NUP160Q12769 1436 aa14.27□□□□□ -0.13
RPE-202ENST00000359429 BRPF3Q9ULD4 1205 aa14.27□□□□□ -0.13
RPE-202ENST00000359429 SAMD9LQ8IVG5 1584 aa14.26□□□□□ -0.13
RPE-202ENST00000359429 MAGI2Q86UL8 1455 aa14.26□□□□□ -0.13
RPE-202ENST00000359429 CENPQQ7L2Z9 268 aaPredicted RBP14.26□□□□□ -0.13
RPE-202ENST00000359429 PLEKHH2Q8IVE3 1493 aa14.26□□□□□ -0.13
RPE-202ENST00000359429 ZNF521Q96K83 1311 aa14.26□□□□□ -0.13
RPE-202ENST00000359429 PPP2R1AP30153 589 aa14.26□□□□□ -0.13
RPE-202ENST00000359429 GSE1Q14687 1217 aa14.26□□□□□ -0.13
RPE-202ENST00000359429 PRKCSHP14314 528 aaPredicted RBP14.24□□□□□ -0.13
RPE-202ENST00000359429 FAM161AQ3B820 660 aa14.24□□□□□ -0.13
RPE-202ENST00000359429 WDR7Q9Y4E6 1490 aa14.23□□□□□ -0.13
RPE-202ENST00000359429 AMER1Q5JTC6 1135 aaPredicted RBP14.23□□□□□ -0.13
RPE-202ENST00000359429 FRAT1Q92837 279 aaPredicted RBP14.23□□□□□ -0.13
RPE-202ENST00000359429 RGS3P49796 1198 aa14.22□□□□□ -0.13
RPE-202ENST00000359429 GOLGA2Q08379 1002 aa14.22□□□□□ -0.13
RPE-202ENST00000359429 SPINK5Q9NQ38 1064 aaPredicted RBP14.22□□□□□ -0.13
RPE-202ENST00000359429 LAMC1P11047 1609 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms