RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 JPH4Q96JJ6 628 aa8.54□□□□□ -1.04
CSDE1-203ENST00000358528 NFKBIBQ15653 356 aa8.54□□□□□ -1.04
CSDE1-203ENST00000358528 MS4A1P11836 297 aa8.53□□□□□ -1.04
CSDE1-203ENST00000358528 GOLGA2Q08379 1002 aa8.53□□□□□ -1.04
CSDE1-203ENST00000358528 GSE1Q14687 1217 aa8.53□□□□□ -1.04
CSDE1-203ENST00000358528 UPF2Q9HAU5 1272 aaKnown RBP8.53□□□□□ -1.04
CSDE1-203ENST00000358528 CCDC144AA2RUR9 1427 aa8.52□□□□□ -1.05
CSDE1-203ENST00000358528 ARID4BQ4LE39 1312 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-203ENST00000358528 APAF1O14727 1248 aa8.51□□□□□ -1.05
CSDE1-203ENST00000358528 ROCK1Q13464 1354 aa8.51□□□□□ -1.05
CSDE1-203ENST00000358528 USP35Q9P2H5 1018 aa8.51□□□□□ -1.05
CSDE1-203ENST00000358528 KDM5BQ9UGL1 1544 aa8.51□□□□□ -1.05
CSDE1-203ENST00000358528 DENND4BO75064 1496 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-203ENST00000358528 CLUAP1Q96AJ1 413 aa8.51□□□□□ -1.05
CSDE1-203ENST00000358528 RRP7AQ9Y3A4 280 aaKnown RBP8.51□□□□□ -1.05
CSDE1-203ENST00000358528 FAM161AQ3B820 660 aa8.5□□□□□ -1.05
CSDE1-203ENST00000358528 BCL2L13Q9BXK5 485 aa8.5□□□□□ -1.05
CSDE1-203ENST00000358528 FRAT2O75474 233 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-203ENST00000358528 TEX14Q8IWB6 1497 aa8.5□□□□□ -1.05
CSDE1-203ENST00000358528 IQGAP2Q13576 1575 aa8.5□□□□□ -1.05
CSDE1-203ENST00000358528 CENPQQ7L2Z9 268 aaPredicted RBP8.49□□□□□ -1.05
CSDE1-203ENST00000358528 GZF1Q9H116 711 aaPredicted RBP8.49□□□□□ -1.05
CSDE1-203ENST00000358528 COG6Q9Y2V7 657 aa8.49□□□□□ -1.05
CSDE1-203ENST00000358528 BECN1Q14457 450 aa8.49□□□□□ -1.05
CSDE1-203ENST00000358528 SPATA31E1Q6ZUB1 1445 aa8.49□□□□□ -1.05
CSDE1-203ENST00000358528 TCOF1Q13428 1488 aaKnown RBP8.49□□□□□ -1.05
CSDE1-203ENST00000358528 CAMSAP2Q08AD1 1489 aa8.48□□□□□ -1.05
CSDE1-203ENST00000358528 BCAR3O75815 825 aa8.48□□□□□ -1.05
CSDE1-203ENST00000358528 PLB1Q6P1J6 1458 aa8.48□□□□□ -1.05
CSDE1-203ENST00000358528 CARMIL2Q6F5E8 1435 aa8.48□□□□□ -1.05
CSDE1-203ENST00000358528 TROQ12816 1431 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-203ENST00000358528 RNF123Q5XPI4 1314 aa8.47□□□□□ -1.05
CSDE1-203ENST00000358528 CDCA8Q53HL2 280 aa8.47□□□□□ -1.05
CSDE1-203ENST00000358528 C9orf84Q5VXU9 1444 aa8.47□□□□□ -1.05
CSDE1-203ENST00000358528 PANK1Q8TE04 598 aa8.46□□□□□ -1.05
CSDE1-203ENST00000358528 LAMC3Q9Y6N6 1575 aa8.46□□□□□ -1.05
CSDE1-203ENST00000358528 PPP2R1AP30153 589 aa8.46□□□□□ -1.06
CSDE1-203ENST00000358528 PZPP20742 1482 aa8.46□□□□□ -1.06
CSDE1-203ENST00000358528 HSP90AA1P07900 732 aaKnown RBP8.46□□□□□ -1.06
CSDE1-203ENST00000358528 ERCC6Q03468 1493 aa8.45□□□□□ -1.06
CSDE1-203ENST00000358528 SAMD9Q5K651 1589 aa8.45□□□□□ -1.06
CSDE1-203ENST00000358528 SAFB2Q14151 953 aaKnown RBP eCLIP8.45□□□□□ -1.06
CSDE1-203ENST00000358528 PRKCSHP14314 528 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-203ENST00000358528 FTSJ3Q8IY81 847 aaKnown RBP8.44□□□□□ -1.06
CSDE1-203ENST00000358528 GCC2Q8IWJ2 1684 aa8.44□□□□□ -1.06
CSDE1-203ENST00000358528 DISP3Q9P2K9 1392 aa8.44□□□□□ -1.06
CSDE1-203ENST00000358528 ZNF608Q9ULD9 1512 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-203ENST00000358528 MORC1Q86VD1 984 aa8.44□□□□□ -1.06
CSDE1-203ENST00000358528 CENPJQ9HC77 1338 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-203ENST00000358528 ARHGEF11O15085 1522 aa8.43□□□□□ -1.06
CSDE1-203ENST00000358528 NUP153P49790 1475 aaKnown RBP8.43□□□□□ -1.06
CSDE1-203ENST00000358528 LRRIQ1Q96JM4 1722 aa8.43□□□□□ -1.06
CSDE1-203ENST00000358528 U2SURPO15042 1029 aaKnown RBP8.43□□□□□ -1.06
CSDE1-203ENST00000358528 GPATCH8Q9UKJ3 1502 aaKnown RBP8.42□□□□□ -1.06
CSDE1-203ENST00000358528 MFAP1P55081 439 aaKnown RBP8.42□□□□□ -1.06
CSDE1-203ENST00000358528 LRPPRCP42704 1394 aaKnown RBP8.42□□□□□ -1.06
CSDE1-203ENST00000358528 WDR62O43379 1518 aa8.42□□□□□ -1.06
CSDE1-203ENST00000358528 NUTM2DQ5VT03 806 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-203ENST00000358528 NAP1L5Q96NT1 182 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-203ENST00000358528 KIF21AQ7Z4S6 1674 aa8.41□□□□□ -1.06
CSDE1-203ENST00000358528 PER1O15534 1290 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-203ENST00000358528 DUSP27Q5VZP5 1158 aa8.41□□□□□ -1.06
CSDE1-203ENST00000358528 BCORL1Q5H9F3 1711 aa8.41□□□□□ -1.06
CSDE1-203ENST00000358528 ERBINQ96RT1 1412 aa8.41□□□□□ -1.06
CSDE1-203ENST00000358528 KIAA0586Q9BVV6 1533 aa8.4□□□□□ -1.06
CSDE1-203ENST00000358528 TRAK1Q9UPV9 953 aa8.4□□□□□ -1.06
CSDE1-203ENST00000358528 RALGAPBQ86X10 1494 aa8.4□□□□□ -1.06
CSDE1-203ENST00000358528 U2AF1L5P0DN76 240 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-203ENST00000358528 U2AF1Q01081 240 aaKnown RBP eCLIP8.4□□□□□ -1.06
CSDE1-203ENST00000358528 E9PSI1 815 aa8.4□□□□□ -1.07
CSDE1-203ENST00000358528 DNMT1P26358 1616 aaKnown RBP8.4□□□□□ -1.07
CSDE1-203ENST00000358528 KIF3BO15066 747 aa8.39□□□□□ -1.07
CSDE1-203ENST00000358528 POGKQ9P215 609 aa8.39□□□□□ -1.07
CSDE1-203ENST00000358528 PARD3Q8TEW0 1356 aa8.39□□□□□ -1.07
CSDE1-203ENST00000358528 CFAP53Q96M91 514 aa8.39□□□□□ -1.07
CSDE1-203ENST00000358528 FOXD4L1Q9NU39 408 aa8.39□□□□□ -1.07
CSDE1-203ENST00000358528 PTPRGP23470 1445 aa8.39□□□□□ -1.07
CSDE1-203ENST00000358528 IGHDP01880 384 aa8.39□□□□□ -1.07
CSDE1-203ENST00000358528 SLFN5Q08AF3 891 aa8.39□□□□□ -1.07
CSDE1-203ENST00000358528 CFAP70Q5T0N1 1121 aa8.39□□□□□ -1.07
CSDE1-203ENST00000358528 ABCA5Q8WWZ7 1642 aa8.38□□□□□ -1.07
CSDE1-203ENST00000358528 C8orf34Q49A92 452 aa8.38□□□□□ -1.07
CSDE1-203ENST00000358528 TESK2Q96S53 571 aa8.38□□□□□ -1.07
CSDE1-203ENST00000358528 SPINK5Q9NQ38 1064 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-203ENST00000358528 PLEKHH1Q9ULM0 1364 aa8.38□□□□□ -1.07
CSDE1-203ENST00000358528 ITPRIPQ8IWB1 547 aa8.38□□□□□ -1.07
CSDE1-203ENST00000358528 RSPH4AQ5TD94 716 aa8.38□□□□□ -1.07
CSDE1-203ENST00000358528 CGNL1Q0VF96 1302 aa8.37□□□□□ -1.07
CSDE1-203ENST00000358528 WASHC2CQ9Y4E1 1318 aa8.37□□□□□ -1.07
CSDE1-203ENST00000358528 EFCAB2Q5VUJ9 269 aa8.37□□□□□ -1.07
CSDE1-203ENST00000358528 AFAP1Q8N556 730 aa8.37□□□□□ -1.07
CSDE1-203ENST00000358528 RWDD1Q9H446 243 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-203ENST00000358528 RAPGEF6Q8TEU7 1601 aa8.36□□□□□ -1.07
CSDE1-203ENST00000358528 SEC24BO95487 1268 aa8.36□□□□□ -1.07
CSDE1-203ENST00000358528 SMC4Q9NTJ3 1288 aa8.36□□□□□ -1.07
CSDE1-203ENST00000358528 STK26Q9P289 416 aa8.36□□□□□ -1.07
CSDE1-203ENST00000358528 SPAG9O60271 1321 aaKnown RBP8.36□□□□□ -1.07
CSDE1-203ENST00000358528 PMFBP1Q8TBY8 1022 aa8.36□□□□□ -1.07
CSDE1-203ENST00000358528 KDM5CP41229 1560 aa8.36□□□□□ -1.07
CSDE1-203ENST00000358528 MAPK8IP3Q9UPT6 1336 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms