RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 UNC13BO14795 1591 aa37.92■■■■□ 3.66
SSBP3-202ENST00000357475 ARID4BQ4LE39 1312 aaPredicted RBP37.88■■■■□ 3.65
SSBP3-202ENST00000357475 GGT6Q6P531 493 aa37.85■■■■□ 3.65
SSBP3-202ENST00000357475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.85■■■■□ 3.65
SSBP3-202ENST00000357475 MLECQ14165 292 aa37.84■■■■□ 3.65
SSBP3-202ENST00000357475 PRDM15P57071 1507 aaPredicted RBP37.83■■■■□ 3.65
SSBP3-202ENST00000357475 TRIM52Q96A61 297 aa37.8■■■■□ 3.64
SSBP3-202ENST00000357475 HRCP23327 699 aa37.77■■■■□ 3.64
SSBP3-202ENST00000357475 NUP155O75694 1391 aa37.77■■■■□ 3.64
SSBP3-202ENST00000357475 VWDEQ8N2E2 1590 aa37.77■■■■□ 3.64
SSBP3-202ENST00000357475 CEP152O94986 1710 aa37.76■■■■□ 3.64
SSBP3-202ENST00000357475 KDM5DQ9BY66 1539 aa37.75■■■■□ 3.63
SSBP3-202ENST00000357475 IQGAP3Q86VI3 1631 aa37.75■■■■□ 3.63
SSBP3-202ENST00000357475 PZPP20742 1482 aa37.73■■■■□ 3.63
SSBP3-202ENST00000357475 FAM135AQ9P2D6 1515 aa37.7■■■■□ 3.63
SSBP3-202ENST00000357475 ABCC3O15438 1527 aa37.68■■■■□ 3.62
SSBP3-202ENST00000357475 CLTCQ00610 1675 aaKnown RBP37.68■■■■□ 3.62
SSBP3-202ENST00000357475 KANK1Q14678 1352 aa37.65■■■■□ 3.62
SSBP3-202ENST00000357475 FER1L4A9Z1Z3 1794 aa37.65■■■■□ 3.62
SSBP3-202ENST00000357475 ZC3H13Q5T200 1668 aaKnown RBP37.64■■■■□ 3.62
SSBP3-202ENST00000357475 ADAMTSL3P82987 1691 aa37.63■■■■□ 3.61
SSBP3-202ENST00000357475 WASHC2CQ9Y4E1 1318 aa37.63■■■■□ 3.61
SSBP3-202ENST00000357475 MADDQ8WXG6 1647 aa37.61■■■■□ 3.61
SSBP3-202ENST00000357475 LMTK2Q8IWU2 1503 aa37.61■■■■□ 3.61
SSBP3-202ENST00000357475 TET3O43151 1660 aa37.61■■■■□ 3.61
SSBP3-202ENST00000357475 CAMSAP1Q5T5Y3 1602 aa37.6■■■■□ 3.61
SSBP3-202ENST00000357475 MPHOSPH9Q99550 1183 aa37.6■■■■□ 3.61
SSBP3-202ENST00000357475 SLC4A1APQ9BWU0 796 aaKnown RBP37.58■■■■□ 3.61
SSBP3-202ENST00000357475 DHX57Q6P158 1386 aaKnown RBP37.56■■■■□ 3.6
SSBP3-202ENST00000357475 E9PCH4 1651 aa37.56■■■■□ 3.6
SSBP3-202ENST00000357475 ACIN1Q9UKV3 1341 aaKnown RBP37.55■■■■□ 3.6
SSBP3-202ENST00000357475 EFCAB6Q5THR3 1501 aa37.55■■■■□ 3.6
SSBP3-202ENST00000357475 PPP6R1Q9UPN7 881 aa37.55■■■■□ 3.6
SSBP3-202ENST00000357475 RIMS1Q86UR5 1692 aaKnown RBP37.54■■■■□ 3.6
SSBP3-202ENST00000357475 FOXD1Q16676 465 aa37.52■■■■□ 3.6
SSBP3-202ENST00000357475 PKD2Q13563 968 aa37.51■■■■□ 3.59
SSBP3-202ENST00000357475 CFAP65Q6ZU64 1925 aaKnown RBP37.49■■■■□ 3.59
SSBP3-202ENST00000357475 MROH2AA6NES4 1674 aa37.48■■■■□ 3.59
SSBP3-202ENST00000357475 ESF1Q9H501 851 aaKnown RBP37.48■■■■□ 3.59
SSBP3-202ENST00000357475 NPATQ14207 1427 aa37.46■■■■□ 3.59
SSBP3-202ENST00000357475 CNTLNQ9NXG0 1405 aa37.46■■■■□ 3.59
SSBP3-202ENST00000357475 C3P01024 1663 aa37.44■■■■□ 3.58
SSBP3-202ENST00000357475 ZMYM3Q14202 1370 aa37.43■■■■□ 3.58
SSBP3-202ENST00000357475 ARHGAP31Q2M1Z3 1444 aa37.4■■■■□ 3.58
SSBP3-202ENST00000357475 KDM4FA0A1W2PPD8 638 aa37.39■■■■□ 3.58
SSBP3-202ENST00000357475 CEBPAP49715 358 aaPredicted RBP37.38■■■■□ 3.57
SSBP3-202ENST00000357475 PREX1Q8TCU6 1659 aa37.36■■■■□ 3.57
SSBP3-202ENST00000357475 FBXO31Q5XUX0 539 aaPredicted RBP37.36■■■■□ 3.57
SSBP3-202ENST00000357475 SPHKAPQ2M3C7 1700 aa37.35■■■■□ 3.57
SSBP3-202ENST00000357475 RPRD2Q5VT52 1461 aaKnown RBP37.35■■■■□ 3.57
SSBP3-202ENST00000357475 PLPPR3Q6T4P5 718 aa37.35■■■■□ 3.57
SSBP3-202ENST00000357475 PLA2R1Q13018 1463 aa37.33■■■■□ 3.57
SSBP3-202ENST00000357475 ERVK-7P63135 1459 aa37.3■■■■□ 3.56
SSBP3-202ENST00000357475 PTPRMP28827 1452 aa37.29■■■■□ 3.56
SSBP3-202ENST00000357475 CCER1Q8TC90 406 aaPredicted RBP37.29■■■■□ 3.56
SSBP3-202ENST00000357475 SYNMO15061 1565 aa37.28■■■■□ 3.56
SSBP3-202ENST00000357475 PTPRTO14522 1441 aa37.27■■■■□ 3.56
SSBP3-202ENST00000357475 NOS1P29475 1434 aa37.27■■■■□ 3.56
SSBP3-202ENST00000357475 ANKRD30BQ9BXX2 1392 aa37.27■■■■□ 3.56
SSBP3-202ENST00000357475 SPATA31D1Q6ZQQ2 1576 aa37.27■■■■□ 3.56
SSBP3-202ENST00000357475 UGGT1Q9NYU2 1555 aa37.25■■■■□ 3.55
SSBP3-202ENST00000357475 TRPM2O94759 1503 aa37.23■■■■□ 3.55
SSBP3-202ENST00000357475 CLTCL1P53675 1640 aa37.19■■■■□ 3.54
SSBP3-202ENST00000357475 SIN3AQ96ST3 1273 aa37.15■■■■□ 3.54
SSBP3-202ENST00000357475 PIK3C2BO00750 1634 aa37.15■■■■□ 3.54
SSBP3-202ENST00000357475 TNRQ92752 1358 aa37.13■■■■□ 3.53
SSBP3-202ENST00000357475 CCDC144AA2RUR9 1427 aa37.09■■■■□ 3.53
SSBP3-202ENST00000357475 MYO3AQ8NEV4 1616 aa37.06■■■■□ 3.52
SSBP3-202ENST00000357475 IDI1Q13907 227 aa37.05■■■■□ 3.52
SSBP3-202ENST00000357475 NEUROD1Q13562 356 aa37.04■■■■□ 3.52
SSBP3-202ENST00000357475 CLSPNQ9HAW4 1339 aa37.02■■■■□ 3.52
SSBP3-202ENST00000357475 KIF1BO60333 1816 aa37.01■■■■□ 3.52
SSBP3-202ENST00000357475 MYO5BQ9ULV0 1848 aa37.01■■■■□ 3.52
SSBP3-202ENST00000357475 SETD1BQ9UPS6 1966 aaKnown RBP36.99■■■■□ 3.51
SSBP3-202ENST00000357475 SLC52A1Q9NWF4 448 aa36.99■■■■□ 3.51
SSBP3-202ENST00000357475 TMEM131LA2VDJ0 1609 aa36.97■■■■□ 3.51
SSBP3-202ENST00000357475 NLRP1Q9C000 1473 aa36.96■■■■□ 3.51
SSBP3-202ENST00000357475 UBR1Q8IWV7 1749 aa36.93■■■■□ 3.5
SSBP3-202ENST00000357475 ADGRB3O60242 1522 aa36.93■■■■□ 3.5
SSBP3-202ENST00000357475 SPATA31E1Q6ZUB1 1445 aa36.92■■■■□ 3.5
SSBP3-202ENST00000357475 CHGAP10645 457 aaKnown RBP36.92■■■■□ 3.5
SSBP3-202ENST00000357475 CEP170BQ9Y4F5 1589 aaPredicted RBP36.91■■■■□ 3.5
SSBP3-202ENST00000357475 ZNF142P52746 1687 aaPredicted RBP36.91■■■■□ 3.5
SSBP3-202ENST00000357475 A2ML1A8K2U0 1454 aa36.87■■■■□ 3.49
SSBP3-202ENST00000357475 RGL3Q3MIN7 710 aa36.86■■■■□ 3.49
SSBP3-202ENST00000357475 KDM5AP29375 1690 aaKnown RBP36.85■■■■□ 3.49
SSBP3-202ENST00000357475 UHRF1BP1Q6BDS2 1440 aa36.83■■■■□ 3.49
SSBP3-202ENST00000357475 STAG3Q9UJ98 1225 aa36.82■■■■□ 3.48
SSBP3-202ENST00000357475 NEURL4Q96JN8 1562 aa36.82■■■■□ 3.48
SSBP3-202ENST00000357475 IFT172Q9UG01 1749 aa36.77■■■■□ 3.48
SSBP3-202ENST00000357475 ZNF326Q5BKZ1 582 aaKnown RBP36.76■■■■□ 3.48
SSBP3-202ENST00000357475 L3MBTL2Q969R5 705 aa36.75■■■■□ 3.47
SSBP3-202ENST00000357475 PPLO60437 1756 aa36.75■■■■□ 3.47
SSBP3-202ENST00000357475 TONSLQ96HA7 1378 aa36.75■■■■□ 3.47
SSBP3-202ENST00000357475 NEXMIFQ5QGS0 1516 aa36.74■■■■□ 3.47
SSBP3-202ENST00000357475 LMTK3Q96Q04 1460 aa36.73■■■■□ 3.47
SSBP3-202ENST00000357475 NUTM2DQ5VT03 806 aaPredicted RBP36.69■■■■□ 3.46
SSBP3-202ENST00000357475 TMEM2Q9UHN6 1383 aa36.68■■■■□ 3.46
SSBP3-202ENST00000357475 ZFYVE9O95405 1425 aa36.68■■■■□ 3.46
SSBP3-202ENST00000357475 DCAF11Q8TEB1 546 aa36.67■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms