RNA–Protein interactions for RNA: ENST00000351137.8

CKLF-203, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-203ENST00000351137 HNRNPMP52272 730 aaKnown RBP eCLIP25.52■■□□□ 1.68
CKLF-203ENST00000351137 TNRQ92752 1358 aa25.52■■□□□ 1.68
CKLF-203ENST00000351137 ZNF777Q9ULD5 760 aaPredicted RBP25.5■■□□□ 1.67
CKLF-203ENST00000351137 PZPP20742 1482 aa25.49■■□□□ 1.67
CKLF-203ENST00000351137 THEMISQ8N1K5 641 aaPredicted RBP25.49■■□□□ 1.67
CKLF-203ENST00000351137 RNF17Q9BXT8 1623 aaKnown RBP25.48■■□□□ 1.67
CKLF-203ENST00000351137 SYNMO15061 1565 aa25.48■■□□□ 1.67
CKLF-203ENST00000351137 NLRP1Q9C000 1473 aa25.47■■□□□ 1.67
CKLF-203ENST00000351137 NPHP4O75161 1426 aaPredicted RBP25.47■■□□□ 1.67
CKLF-203ENST00000351137 RGS17Q9UGC6 210 aaPredicted RBP25.47■■□□□ 1.67
CKLF-203ENST00000351137 RTEL1-TNFRSF6BF6WH68 1400 aa25.45■■□□□ 1.66
CKLF-203ENST00000351137 LRRC7Q96NW7 1537 aa25.44■■□□□ 1.66
CKLF-203ENST00000351137 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.44■■□□□ 1.66
CKLF-203ENST00000351137 IQGAP1P46940 1657 aa25.42■■□□□ 1.66
CKLF-203ENST00000351137 FYCO1Q9BQS8 1478 aa25.42■■□□□ 1.66
CKLF-203ENST00000351137 CFDP1Q9UEE9 299 aaPredicted RBP25.42■■□□□ 1.66
CKLF-203ENST00000351137 DHX29Q7Z478 1369 aaKnown RBP25.42■■□□□ 1.66
CKLF-203ENST00000351137 UGGT1Q9NYU2 1555 aa25.41■■□□□ 1.66
CKLF-203ENST00000351137 KDM5DQ9BY66 1539 aa25.41■■□□□ 1.66
CKLF-203ENST00000351137 MIA2Q96PC5 1412 aa25.4■■□□□ 1.66
CKLF-203ENST00000351137 STRCP1A6NGW2 1772 aa25.39■■□□□ 1.65
CKLF-203ENST00000351137 FBXO31Q5XUX0 539 aaPredicted RBP25.38■■□□□ 1.65
CKLF-203ENST00000351137 CCNB3Q8WWL7 1395 aa25.35■■□□□ 1.65
CKLF-203ENST00000351137 MBD5Q9P267 1494 aa25.34■■□□□ 1.65
CKLF-203ENST00000351137 WASHC2CQ9Y4E1 1318 aa25.29■■□□□ 1.64
CKLF-203ENST00000351137 FAM135BQ49AJ0 1406 aa25.29■■□□□ 1.64
CKLF-203ENST00000351137 KIF3BO15066 747 aa25.28■■□□□ 1.64
CKLF-203ENST00000351137 ZC3H13Q5T200 1668 aaKnown RBP25.27■■□□□ 1.64
CKLF-203ENST00000351137 POTEAQ6S8J7 498 aa25.26■■□□□ 1.63
CKLF-203ENST00000351137 RSPH4AQ5TD94 716 aa25.21■■□□□ 1.63
CKLF-203ENST00000351137 EHMT2Q96KQ7 1210 aa25.21■■□□□ 1.63
CKLF-203ENST00000351137 SENP3Q9H4L4 574 aaPredicted RBP25.2■■□□□ 1.62
CKLF-203ENST00000351137 XIRP1Q702N8 1843 aaKnown RBP25.2■■□□□ 1.62
CKLF-203ENST00000351137 TIAM1Q13009 1591 aa25.19■■□□□ 1.62
CKLF-203ENST00000351137 ZNF644Q9H582 1327 aaPredicted RBP25.18■■□□□ 1.62
CKLF-203ENST00000351137 MTUS2Q5JR59 1369 aa25.18■■□□□ 1.62
CKLF-203ENST00000351137 CCDC141Q6ZP82 1450 aa25.17■■□□□ 1.62
CKLF-203ENST00000351137 SCAF11Q99590 1463 aaKnown RBP25.17■■□□□ 1.62
CKLF-203ENST00000351137 ARHGAP23Q9P227 1491 aa25.14■■□□□ 1.61
CKLF-203ENST00000351137 SLIT1O75093 1534 aa25.13■■□□□ 1.61
CKLF-203ENST00000351137 UBR1Q8IWV7 1749 aa25.13■■□□□ 1.61
CKLF-203ENST00000351137 ERVK-7P63135 1459 aa25.13■■□□□ 1.61
CKLF-203ENST00000351137 ABCC3O15438 1527 aa25.11■■□□□ 1.61
CKLF-203ENST00000351137 CEP162Q5TB80 1403 aa25.11■■□□□ 1.61
CKLF-203ENST00000351137 EHBP1L1Q8N3D4 1523 aa25.09■■□□□ 1.61
CKLF-203ENST00000351137 LRRC9Q6ZRR7 1453 aa25.09■■□□□ 1.61
CKLF-203ENST00000351137 SETD1AO15047 1707 aaKnown RBP25.07■■□□□ 1.6
CKLF-203ENST00000351137 NCOA2Q15596 1464 aa25.07■■□□□ 1.6
CKLF-203ENST00000351137 ROBO1Q9Y6N7 1651 aa25.06■■□□□ 1.6
CKLF-203ENST00000351137 ARHGEF5Q12774 1597 aa25.05■■□□□ 1.6
CKLF-203ENST00000351137 LTKP29376 864 aa25.04■■□□□ 1.6
CKLF-203ENST00000351137 TXNDC2Q86VQ3 553 aa25.03■■□□□ 1.6
CKLF-203ENST00000351137 EIF2AK4Q9P2K8 1649 aaKnown RBP25.03■■□□□ 1.6
CKLF-203ENST00000351137 CAMSAP2Q08AD1 1489 aa25.02■■□□□ 1.6
CKLF-203ENST00000351137 TMEM94Q12767 1356 aa25.01■■□□□ 1.59
CKLF-203ENST00000351137 UPF1Q92900 1129 aaKnown RBP eCLIP25■■□□□ 1.59
CKLF-203ENST00000351137 EID1Q9Y6B2 187 aa25■■□□□ 1.59
CKLF-203ENST00000351137 TSPY4P0CV99 314 aa24.99■■□□□ 1.59
CKLF-203ENST00000351137 TSPY10P0CW01 314 aa24.99■■□□□ 1.59
CKLF-203ENST00000351137 JCADQ9P266 1359 aa24.99■■□□□ 1.59
CKLF-203ENST00000351137 MAP3K1Q13233 1512 aa24.98■■□□□ 1.59
CKLF-203ENST00000351137 ARHGAP31Q2M1Z3 1444 aa24.97■■□□□ 1.59
CKLF-203ENST00000351137 KCNA6P17658 529 aa24.97■■□□□ 1.59
CKLF-203ENST00000351137 MROH1Q8NDA8 1641 aa24.96■■□□□ 1.59
CKLF-203ENST00000351137 MAST1Q9Y2H9 1570 aa24.95■■□□□ 1.58
CKLF-203ENST00000351137 KDM5AP29375 1690 aaKnown RBP24.94■■□□□ 1.58
CKLF-203ENST00000351137 CFAP65Q6ZU64 1925 aaKnown RBP24.94■■□□□ 1.58
CKLF-203ENST00000351137 TMEM2Q9UHN6 1383 aa24.93■■□□□ 1.58
CKLF-203ENST00000351137 PRDM15P57071 1507 aaPredicted RBP24.93■■□□□ 1.58
CKLF-203ENST00000351137 NKTRP30414 1462 aaKnown RBP24.93■■□□□ 1.58
CKLF-203ENST00000351137 PHLPP1O60346 1717 aa24.92■■□□□ 1.58
CKLF-203ENST00000351137 ZNF772Q68DY9 489 aaPredicted RBP24.91■■□□□ 1.58
CKLF-203ENST00000351137 CEP152O94986 1710 aa24.9■■□□□ 1.58
CKLF-203ENST00000351137 FGD6Q6ZV73 1430 aa24.9■■□□□ 1.58
CKLF-203ENST00000351137 SPATA31A6Q5VVP1 1343 aa24.89■■□□□ 1.58
CKLF-203ENST00000351137 NWD1Q149M9 1564 aa24.89■■□□□ 1.58
CKLF-203ENST00000351137 SRCAPQ6ZRS2 3230 aa24.89■■□□□ 1.57
CKLF-203ENST00000351137 TET3O43151 1660 aa24.88■■□□□ 1.57
CKLF-203ENST00000351137 PROSER2Q86WR7 435 aaPredicted RBP24.88■■□□□ 1.57
CKLF-203ENST00000351137 MSH6P52701 1360 aa24.87■■□□□ 1.57
CKLF-203ENST00000351137 CDK12Q9NYV4 1490 aaPredicted RBP24.87■■□□□ 1.57
CKLF-203ENST00000351137 SLAIN2Q9P270 581 aa24.86■■□□□ 1.57
CKLF-203ENST00000351137 COL16A1Q07092 1604 aaPredicted RBP24.85■■□□□ 1.57
CKLF-203ENST00000351137 PIK3C2BO00750 1634 aa24.84■■□□□ 1.57
CKLF-203ENST00000351137 EFCAB6Q5THR3 1501 aa24.81■■□□□ 1.56
CKLF-203ENST00000351137 DUOX2Q9NRD8 1548 aa24.81■■□□□ 1.56
CKLF-203ENST00000351137 LRP6O75581 1613 aa24.8■■□□□ 1.56
CKLF-203ENST00000351137 NCOA3Q9Y6Q9 1424 aa24.79■■□□□ 1.56
CKLF-203ENST00000351137 CHIC1Q5VXU3 224 aa24.79■■□□□ 1.56
CKLF-203ENST00000351137 SHPRHQ149N8 1683 aa24.77■■□□□ 1.56
CKLF-203ENST00000351137 RXRBP28702 533 aa24.76■■□□□ 1.55
CKLF-203ENST00000351137 STAG3Q9UJ98 1225 aa24.76■■□□□ 1.55
CKLF-203ENST00000351137 TRIM52Q96A61 297 aa24.75■■□□□ 1.55
CKLF-203ENST00000351137 SLC26A8Q96RN1 970 aa24.74■■□□□ 1.55
CKLF-203ENST00000351137 AHDC1Q5TGY3 1603 aaPredicted RBP24.74■■□□□ 1.55
CKLF-203ENST00000351137 MEX3CQ5U5Q3 659 aaKnown RBP24.73■■□□□ 1.55
CKLF-203ENST00000351137 ERBINQ96RT1 1412 aa24.72■■□□□ 1.55
CKLF-203ENST00000351137 CHD2O14647 1828 aaKnown RBP24.71■■□□□ 1.55
CKLF-203ENST00000351137 IDI1Q13907 227 aa24.7■■□□□ 1.54
CKLF-203ENST00000351137 RBM33Q96EV2 1170 aaKnown RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms