RNA–Protein interactions for RNA: ENST00000348795.8

SNCG-201, Transcript of synuclein gamma, humanhuman

TSL 2 BASIC

Gene SNCG, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-201ENST00000348795 DEPDC5O75140 1603 aa26.68■■□□□ 1.86
SNCG-201ENST00000348795 BCORL1Q5H9F3 1711 aa26.68■■□□□ 1.86
SNCG-201ENST00000348795 FAM135AQ9P2D6 1515 aa26.67■■□□□ 1.86
SNCG-201ENST00000348795 FRMPD1Q5SYB0 1578 aa26.67■■□□□ 1.86
SNCG-201ENST00000348795 ABCA6Q8N139 1617 aa26.64■■□□□ 1.85
SNCG-201ENST00000348795 DIP2CQ9Y2E4 1556 aa26.63■■□□□ 1.85
SNCG-201ENST00000348795 ANKRD30BQ9BXX2 1392 aa26.63■■□□□ 1.85
SNCG-201ENST00000348795 PKD2Q13563 968 aa26.63■■□□□ 1.85
SNCG-201ENST00000348795 KIF3BO15066 747 aa26.62■■□□□ 1.85
SNCG-201ENST00000348795 TRHP20396 242 aaPredicted RBP26.62■■□□□ 1.85
SNCG-201ENST00000348795 REREQ9P2R6 1566 aa26.62■■□□□ 1.85
SNCG-201ENST00000348795 RNF17Q9BXT8 1623 aaKnown RBP26.61■■□□□ 1.85
SNCG-201ENST00000348795 PRDM15P57071 1507 aaPredicted RBP26.6■■□□□ 1.85
SNCG-201ENST00000348795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.6■■□□□ 1.85
SNCG-201ENST00000348795 ATP10AO60312 1499 aa26.6■■□□□ 1.85
SNCG-201ENST00000348795 TONSLQ96HA7 1378 aa26.58■■□□□ 1.84
SNCG-201ENST00000348795 NEUROD1Q13562 356 aa26.57■■□□□ 1.84
SNCG-201ENST00000348795 VWDEQ8N2E2 1590 aa26.57■■□□□ 1.84
SNCG-201ENST00000348795 SIN3AQ96ST3 1273 aa26.56■■□□□ 1.84
SNCG-201ENST00000348795 RPRD2Q5VT52 1461 aaKnown RBP26.54■■□□□ 1.84
SNCG-201ENST00000348795 PPP6R1Q9UPN7 881 aa26.53■■□□□ 1.84
SNCG-201ENST00000348795 TET3O43151 1660 aa26.53■■□□□ 1.84
SNCG-201ENST00000348795 AGLP35573 1532 aa26.52■■□□□ 1.84
SNCG-201ENST00000348795 LMTK2Q8IWU2 1503 aa26.52■■□□□ 1.84
SNCG-201ENST00000348795 YEATS2Q9ULM3 1422 aa26.52■■□□□ 1.84
SNCG-201ENST00000348795 MROH1Q8NDA8 1641 aa26.49■■□□□ 1.83
SNCG-201ENST00000348795 ARHGEF40Q8TER5 1519 aa26.49■■□□□ 1.83
SNCG-201ENST00000348795 COL17A1Q9UMD9 1497 aaPredicted RBP26.49■■□□□ 1.83
SNCG-201ENST00000348795 FOXD1Q16676 465 aa26.47■■□□□ 1.83
SNCG-201ENST00000348795 ZC3H13Q5T200 1668 aaKnown RBP26.45■■□□□ 1.82
SNCG-201ENST00000348795 CCDC144AA2RUR9 1427 aa26.42■■□□□ 1.82
SNCG-201ENST00000348795 PPP1R15AO75807 674 aaPredicted RBP26.42■■□□□ 1.82
SNCG-201ENST00000348795 GGT6Q6P531 493 aa26.42■■□□□ 1.82
SNCG-201ENST00000348795 WASHC2CQ9Y4E1 1318 aa26.4■■□□□ 1.82
SNCG-201ENST00000348795 EFCAB6Q5THR3 1501 aa26.4■■□□□ 1.82
SNCG-201ENST00000348795 E9PCH4 1651 aa26.39■■□□□ 1.82
SNCG-201ENST00000348795 PTPRTO14522 1441 aa26.38■■□□□ 1.81
SNCG-201ENST00000348795 ABCC3O15438 1527 aa26.35■■□□□ 1.81
SNCG-201ENST00000348795 TRPM2O94759 1503 aa26.35■■□□□ 1.81
SNCG-201ENST00000348795 ARHGAP31Q2M1Z3 1444 aa26.35■■□□□ 1.81
SNCG-201ENST00000348795 SPHKAPQ2M3C7 1700 aa26.34■■□□□ 1.81
SNCG-201ENST00000348795 CEP152O94986 1710 aa26.34■■□□□ 1.81
SNCG-201ENST00000348795 PLA2R1Q13018 1463 aa26.31■■□□□ 1.8
SNCG-201ENST00000348795 STAC3Q96MF2 364 aa26.31■■□□□ 1.8
SNCG-201ENST00000348795 L3MBTL2Q969R5 705 aa26.3■■□□□ 1.8
SNCG-201ENST00000348795 CAMSAP1Q5T5Y3 1602 aa26.29■■□□□ 1.8
SNCG-201ENST00000348795 NEURL4Q96JN8 1562 aa26.29■■□□□ 1.8
SNCG-201ENST00000348795 CNTLNQ9NXG0 1405 aa26.28■■□□□ 1.8
SNCG-201ENST00000348795 ESF1Q9H501 851 aaKnown RBP26.25■■□□□ 1.79
SNCG-201ENST00000348795 NPATQ14207 1427 aa26.23■■□□□ 1.79
SNCG-201ENST00000348795 ZNF316A6NFI3 1004 aaPredicted RBP26.21■■□□□ 1.79
SNCG-201ENST00000348795 ARID4BQ4LE39 1312 aaPredicted RBP26.18■■□□□ 1.78
SNCG-201ENST00000348795 NOS1P29475 1434 aa26.18■■□□□ 1.78
SNCG-201ENST00000348795 UHRF1BP1Q6BDS2 1440 aa26.17■■□□□ 1.78
SNCG-201ENST00000348795 SLC52A1Q9NWF4 448 aa26.16■■□□□ 1.78
SNCG-201ENST00000348795 CLTCL1P53675 1640 aa26.15■■□□□ 1.78
SNCG-201ENST00000348795 KIF1BO60333 1816 aa26.15■■□□□ 1.78
SNCG-201ENST00000348795 SPATA31E1Q6ZUB1 1445 aa26.14■■□□□ 1.78
SNCG-201ENST00000348795 SIGLEC1Q9BZZ2 1709 aa26.12■■□□□ 1.77
SNCG-201ENST00000348795 CLTCQ00610 1675 aaKnown RBP26.12■■□□□ 1.77
SNCG-201ENST00000348795 DCAF11Q8TEB1 546 aa26.11■■□□□ 1.77
SNCG-201ENST00000348795 MROH2AA6NES4 1674 aa26.09■■□□□ 1.77
SNCG-201ENST00000348795 PREX1Q8TCU6 1659 aa26.09■■□□□ 1.77
SNCG-201ENST00000348795 MLECQ14165 292 aa26.08■■□□□ 1.77
SNCG-201ENST00000348795 RPGRIP1LQ68CZ1 1315 aa26.08■■□□□ 1.77
SNCG-201ENST00000348795 PIK3C2BO00750 1634 aa26.07■■□□□ 1.76
SNCG-201ENST00000348795 RGL3Q3MIN7 710 aa26.07■■□□□ 1.76
SNCG-201ENST00000348795 ERVK-7P63135 1459 aa26.04■■□□□ 1.76
SNCG-201ENST00000348795 ZMYM3Q14202 1370 aa26.04■■□□□ 1.76
SNCG-201ENST00000348795 SPATA31D1Q6ZQQ2 1576 aa26.03■■□□□ 1.76
SNCG-201ENST00000348795 ADGRB3O60242 1522 aa26.03■■□□□ 1.76
SNCG-201ENST00000348795 SYNMO15061 1565 aa26.03■■□□□ 1.76
SNCG-201ENST00000348795 RALGAPBQ86X10 1494 aa26.02■■□□□ 1.76
SNCG-201ENST00000348795 CFAP65Q6ZU64 1925 aaKnown RBP26.02■■□□□ 1.76
SNCG-201ENST00000348795 NBPF8Q3BBV2 869 aa26.01■■□□□ 1.75
SNCG-201ENST00000348795 PRAG1Q86YV5 1406 aa26.01■■□□□ 1.75
SNCG-201ENST00000348795 EIF4G2P78344 907 aaKnown RBP eCLIP26■■□□□ 1.75
SNCG-201ENST00000348795 KDM2AQ9Y2K7 1162 aa26■■□□□ 1.75
SNCG-201ENST00000348795 MYOM2P54296 1465 aa25.98■■□□□ 1.75
SNCG-201ENST00000348795 UGGT1Q9NYU2 1555 aa25.97■■□□□ 1.75
SNCG-201ENST00000348795 ZNF326Q5BKZ1 582 aaKnown RBP25.96■■□□□ 1.75
SNCG-201ENST00000348795 IDI1Q13907 227 aa25.94■■□□□ 1.74
SNCG-201ENST00000348795 FER1L4A9Z1Z3 1794 aa25.93■■□□□ 1.74
SNCG-201ENST00000348795 CHGAP10645 457 aaKnown RBP25.93■■□□□ 1.74
SNCG-201ENST00000348795 IFT172Q9UG01 1749 aa25.92■■□□□ 1.74
SNCG-201ENST00000348795 LAMC1P11047 1609 aa25.92■■□□□ 1.74
SNCG-201ENST00000348795 TRPM1Q7Z4N2 1603 aa25.92■■□□□ 1.74
SNCG-201ENST00000348795 VGFO15240 615 aaPredicted RBP25.91■■□□□ 1.74
SNCG-201ENST00000348795 FBXO31Q5XUX0 539 aaPredicted RBP25.91■■□□□ 1.74
SNCG-201ENST00000348795 KIAA1210Q9ULL0 1709 aa25.91■■□□□ 1.74
SNCG-201ENST00000348795 GPRASP1Q5JY77 1395 aa25.9■■□□□ 1.74
SNCG-201ENST00000348795 KDM5AP29375 1690 aaKnown RBP25.9■■□□□ 1.74
SNCG-201ENST00000348795 MADDQ8WXG6 1647 aa25.89■■□□□ 1.74
SNCG-201ENST00000348795 STAG3Q9UJ98 1225 aa25.89■■□□□ 1.74
SNCG-201ENST00000348795 ROCK2O75116 1388 aaKnown RBP25.89■■□□□ 1.74
SNCG-201ENST00000348795 ZFYVE9O95405 1425 aa25.88■■□□□ 1.73
SNCG-201ENST00000348795 TNRQ92752 1358 aa25.88■■□□□ 1.73
SNCG-201ENST00000348795 CARD11Q9BXL7 1154 aa25.88■■□□□ 1.73
SNCG-201ENST00000348795 TMEM131LA2VDJ0 1609 aa25.88■■□□□ 1.73
SNCG-201ENST00000348795 PPLO60437 1756 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms