RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 SENP3Q9H4L4 574 aaPredicted RBP29.05■■■□□ 2.24
MUC1-204ENST00000343256 CCNB3Q8WWL7 1395 aa29.03■■■□□ 2.24
MUC1-204ENST00000343256 ALKQ9UM73 1620 aa29.03■■■□□ 2.24
MUC1-204ENST00000343256 TNRQ92752 1358 aa29.02■■■□□ 2.24
MUC1-204ENST00000343256 VWDEQ8N2E2 1590 aa29.01■■■□□ 2.24
MUC1-204ENST00000343256 ZNF644Q9H582 1327 aaPredicted RBP29■■■□□ 2.23
MUC1-204ENST00000343256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29■■■□□ 2.23
MUC1-204ENST00000343256 ANKLE2Q86XL3 938 aa28.97■■■□□ 2.23
MUC1-204ENST00000343256 DHX29Q7Z478 1369 aaKnown RBP28.94■■■□□ 2.22
MUC1-204ENST00000343256 PZPP20742 1482 aa28.93■■■□□ 2.22
MUC1-204ENST00000343256 KIF3BO15066 747 aa28.93■■■□□ 2.22
MUC1-204ENST00000343256 NPHP4O75161 1426 aaPredicted RBP28.93■■■□□ 2.22
MUC1-204ENST00000343256 MBD5Q9P267 1494 aa28.92■■■□□ 2.22
MUC1-204ENST00000343256 KDM5DQ9BY66 1539 aa28.89■■■□□ 2.22
MUC1-204ENST00000343256 MTUS2Q5JR59 1369 aa28.89■■■□□ 2.22
MUC1-204ENST00000343256 THEMISQ8N1K5 641 aaPredicted RBP28.89■■■□□ 2.22
MUC1-204ENST00000343256 TIAM1Q13009 1591 aa28.88■■■□□ 2.21
MUC1-204ENST00000343256 RTEL1-TNFRSF6BF6WH68 1400 aa28.88■■■□□ 2.21
MUC1-204ENST00000343256 UGGT1Q9NYU2 1555 aa28.88■■■□□ 2.21
MUC1-204ENST00000343256 MED14O60244 1454 aa28.87■■■□□ 2.21
MUC1-204ENST00000343256 STRCP1A6NGW2 1772 aa28.87■■■□□ 2.21
MUC1-204ENST00000343256 WASHC2CQ9Y4E1 1318 aa28.87■■■□□ 2.21
MUC1-204ENST00000343256 MIA2Q96PC5 1412 aa28.86■■■□□ 2.21
MUC1-204ENST00000343256 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
MUC1-204ENST00000343256 DEPDC5O75140 1603 aa28.85■■■□□ 2.21
MUC1-204ENST00000343256 FAM135AQ9P2D6 1515 aa28.84■■■□□ 2.21
MUC1-204ENST00000343256 IQGAP1P46940 1657 aa28.84■■■□□ 2.21
MUC1-204ENST00000343256 LRRC7Q96NW7 1537 aa28.84■■■□□ 2.21
MUC1-204ENST00000343256 NLRP1Q9C000 1473 aa28.83■■■□□ 2.21
MUC1-204ENST00000343256 RGS17Q9UGC6 210 aaPredicted RBP28.81■■■□□ 2.2
MUC1-204ENST00000343256 RNF17Q9BXT8 1623 aaKnown RBP28.8■■■□□ 2.2
MUC1-204ENST00000343256 SYNMO15061 1565 aa28.75■■■□□ 2.19
MUC1-204ENST00000343256 CCDC141Q6ZP82 1450 aa28.74■■■□□ 2.19
MUC1-204ENST00000343256 EHBP1L1Q8N3D4 1523 aa28.73■■■□□ 2.19
MUC1-204ENST00000343256 CEP162Q5TB80 1403 aa28.69■■■□□ 2.18
MUC1-204ENST00000343256 CAMSAP2Q08AD1 1489 aa28.68■■■□□ 2.18
MUC1-204ENST00000343256 ZC3H13Q5T200 1668 aaKnown RBP28.67■■■□□ 2.18
MUC1-204ENST00000343256 ABCC3O15438 1527 aa28.63■■■□□ 2.17
MUC1-204ENST00000343256 ERVK-7P63135 1459 aa28.62■■■□□ 2.17
MUC1-204ENST00000343256 POTEAQ6S8J7 498 aa28.62■■■□□ 2.17
MUC1-204ENST00000343256 RSPH4AQ5TD94 716 aa28.61■■■□□ 2.17
MUC1-204ENST00000343256 XIRP1Q702N8 1843 aaKnown RBP28.61■■■□□ 2.17
MUC1-204ENST00000343256 UBR1Q8IWV7 1749 aa28.59■■■□□ 2.17
MUC1-204ENST00000343256 CFAP65Q6ZU64 1925 aaKnown RBP28.59■■■□□ 2.17
MUC1-204ENST00000343256 SCAF11Q99590 1463 aaKnown RBP28.59■■■□□ 2.17
MUC1-204ENST00000343256 NCOA2Q15596 1464 aa28.58■■■□□ 2.17
MUC1-204ENST00000343256 TSPY4P0CV99 314 aa28.57■■■□□ 2.16
MUC1-204ENST00000343256 TSPY10P0CW01 314 aa28.57■■■□□ 2.16
MUC1-204ENST00000343256 LTKP29376 864 aa28.57■■■□□ 2.16
MUC1-204ENST00000343256 ARHGEF5Q12774 1597 aa28.54■■■□□ 2.16
MUC1-204ENST00000343256 TXNDC2Q86VQ3 553 aa28.53■■■□□ 2.16
MUC1-204ENST00000343256 CEP152O94986 1710 aa28.52■■■□□ 2.16
MUC1-204ENST00000343256 FAM135BQ49AJ0 1406 aa28.5■■■□□ 2.15
MUC1-204ENST00000343256 MROH1Q8NDA8 1641 aa28.5■■■□□ 2.15
MUC1-204ENST00000343256 ARHGAP23Q9P227 1491 aa28.49■■■□□ 2.15
MUC1-204ENST00000343256 SETD1AO15047 1707 aaKnown RBP28.47■■■□□ 2.15
MUC1-204ENST00000343256 SLIT1O75093 1534 aa28.47■■■□□ 2.15
MUC1-204ENST00000343256 EIF2AK4Q9P2K8 1649 aaKnown RBP28.45■■■□□ 2.14
MUC1-204ENST00000343256 ROBO1Q9Y6N7 1651 aa28.43■■■□□ 2.14
MUC1-204ENST00000343256 TMEM94Q12767 1356 aa28.43■■■□□ 2.14
MUC1-204ENST00000343256 RBM33Q96EV2 1170 aaKnown RBP28.43■■■□□ 2.14
MUC1-204ENST00000343256 MAST1Q9Y2H9 1570 aa28.42■■■□□ 2.14
MUC1-204ENST00000343256 EID1Q9Y6B2 187 aa28.42■■■□□ 2.14
MUC1-204ENST00000343256 PIK3C2BO00750 1634 aa28.36■■■□□ 2.13
MUC1-204ENST00000343256 MAP3K1Q13233 1512 aa28.36■■■□□ 2.13
MUC1-204ENST00000343256 TMEM2Q9UHN6 1383 aa28.35■■■□□ 2.13
MUC1-204ENST00000343256 PROSER2Q86WR7 435 aaPredicted RBP28.34■■■□□ 2.13
MUC1-204ENST00000343256 KCNA6P17658 529 aa28.33■■■□□ 2.13
MUC1-204ENST00000343256 SLC26A8Q96RN1 970 aa28.32■■■□□ 2.12
MUC1-204ENST00000343256 STAG3Q9UJ98 1225 aa28.32■■■□□ 2.12
MUC1-204ENST00000343256 ARHGAP31Q2M1Z3 1444 aa28.31■■■□□ 2.12
MUC1-204ENST00000343256 DUOX2Q9NRD8 1548 aa28.3■■■□□ 2.12
MUC1-204ENST00000343256 PRDM15P57071 1507 aaPredicted RBP28.28■■■□□ 2.12
MUC1-204ENST00000343256 LRRC9Q6ZRR7 1453 aa28.27■■■□□ 2.12
MUC1-204ENST00000343256 PHLPP1O60346 1717 aa28.27■■■□□ 2.12
MUC1-204ENST00000343256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.27■■■□□ 2.12
MUC1-204ENST00000343256 EFCAB6Q5THR3 1501 aa28.25■■■□□ 2.11
MUC1-204ENST00000343256 TET3O43151 1660 aa28.25■■■□□ 2.11
MUC1-204ENST00000343256 JCADQ9P266 1359 aa28.24■■■□□ 2.11
MUC1-204ENST00000343256 IDI1Q13907 227 aa28.23■■■□□ 2.11
MUC1-204ENST00000343256 MSH6P52701 1360 aa28.22■■■□□ 2.11
MUC1-204ENST00000343256 KIF15Q9NS87 1388 aa28.22■■■□□ 2.11
MUC1-204ENST00000343256 SLAIN2Q9P270 581 aa28.21■■■□□ 2.11
MUC1-204ENST00000343256 UPF1Q92900 1129 aaKnown RBP eCLIP28.2■■■□□ 2.1
MUC1-204ENST00000343256 RRP7BPQ9NSQ0 103 aa28.2■■■□□ 2.1
MUC1-204ENST00000343256 NWD1Q149M9 1564 aa28.2■■■□□ 2.1
MUC1-204ENST00000343256 NKTRP30414 1462 aaKnown RBP28.19■■■□□ 2.1
MUC1-204ENST00000343256 MYOM3Q5VTT5 1437 aa28.18■■■□□ 2.1
MUC1-204ENST00000343256 KDM5AP29375 1690 aaKnown RBP28.17■■■□□ 2.1
MUC1-204ENST00000343256 TRIM52Q96A61 297 aa28.17■■■□□ 2.1
MUC1-204ENST00000343256 BCANQ96GW7 911 aa28.17■■■□□ 2.1
MUC1-204ENST00000343256 LRP6O75581 1613 aa28.17■■■□□ 2.1
MUC1-204ENST00000343256 ERBINQ96RT1 1412 aa28.17■■■□□ 2.1
MUC1-204ENST00000343256 KANK4Q5T7N3 995 aaPredicted RBP28.15■■■□□ 2.1
MUC1-204ENST00000343256 COL16A1Q07092 1604 aaPredicted RBP28.14■■■□□ 2.1
MUC1-204ENST00000343256 KANK1Q14678 1352 aa28.12■■■□□ 2.09
MUC1-204ENST00000343256 MEX3CQ5U5Q3 659 aaKnown RBP28.12■■■□□ 2.09
MUC1-204ENST00000343256 ABCC5O15440 1437 aa28.1■■■□□ 2.09
MUC1-204ENST00000343256 ADGRB3O60242 1522 aa28.1■■■□□ 2.09
MUC1-204ENST00000343256 CROCC2H7BZ55 1655 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms