RNA–Protein interactions for RNA: ENST00000342020.5

CTSL-202, Transcript of cathepsin L, humanhuman

TSL 2 BASIC

Gene CTSL, Length 933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-202ENST00000342020 ADGBQ8N7X0 1667 aa20.76■□□□□ 0.91
CTSL-202ENST00000342020 ANKLE2Q86XL3 938 aa20.75■□□□□ 0.91
CTSL-202ENST00000342020 RGS17Q9UGC6 210 aaPredicted RBP20.75■□□□□ 0.91
CTSL-202ENST00000342020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.74■□□□□ 0.913e-6■□□□□ 10.4
CTSL-202ENST00000342020 SENP3Q9H4L4 574 aaPredicted RBP20.73■□□□□ 0.91
CTSL-202ENST00000342020 CFDP1Q9UEE9 299 aaPredicted RBP20.73■□□□□ 0.91
CTSL-202ENST00000342020 MED14O60244 1454 aa20.73■□□□□ 0.91
CTSL-202ENST00000342020 NPHP4O75161 1426 aaPredicted RBP20.72■□□□□ 0.91
CTSL-202ENST00000342020 PZPP20742 1482 aa20.71■□□□□ 0.91
CTSL-202ENST00000342020 FYCO1Q9BQS8 1478 aa20.7■□□□□ 0.9
CTSL-202ENST00000342020 DEPDC5O75140 1603 aa20.7■□□□□ 0.9
CTSL-202ENST00000342020 STRCP1A6NGW2 1772 aa20.69■□□□□ 0.9
CTSL-202ENST00000342020 THEMISQ8N1K5 641 aaPredicted RBP20.69■□□□□ 0.9
CTSL-202ENST00000342020 LRRC7Q96NW7 1537 aa20.68■□□□□ 0.9
CTSL-202ENST00000342020 DHX29Q7Z478 1369 aaKnown RBP20.68■□□□□ 0.9
CTSL-202ENST00000342020 CCNB3Q8WWL7 1395 aa20.67■□□□□ 0.9
CTSL-202ENST00000342020 ZNF644Q9H582 1327 aaPredicted RBP20.66■□□□□ 0.9
CTSL-202ENST00000342020 MIA2Q96PC5 1412 aa20.66■□□□□ 0.9
CTSL-202ENST00000342020 RNF17Q9BXT8 1623 aaKnown RBP20.66■□□□□ 0.9
CTSL-202ENST00000342020 IQGAP1P46940 1657 aa20.65■□□□□ 0.9
CTSL-202ENST00000342020 UGGT1Q9NYU2 1555 aa20.65■□□□□ 0.9
CTSL-202ENST00000342020 KDM5DQ9BY66 1539 aa20.65■□□□□ 0.9
CTSL-202ENST00000342020 NLRP1Q9C000 1473 aa20.65■□□□□ 0.9
CTSL-202ENST00000342020 MBD5Q9P267 1494 aa20.65■□□□□ 0.9
CTSL-202ENST00000342020 RTEL1-TNFRSF6BF6WH68 1400 aa20.64■□□□□ 0.89
CTSL-202ENST00000342020 FAM135AQ9P2D6 1515 aa20.63■□□□□ 0.89
CTSL-202ENST00000342020 KIF3BO15066 747 aa20.63■□□□□ 0.89
CTSL-202ENST00000342020 SYNMO15061 1565 aa20.62■□□□□ 0.89
CTSL-202ENST00000342020 WASHC2CQ9Y4E1 1318 aa20.6■□□□□ 0.89
CTSL-202ENST00000342020 POTEAQ6S8J7 498 aa20.58■□□□□ 0.89
CTSL-202ENST00000342020 TIAM1Q13009 1591 aa20.56■□□□□ 0.88
CTSL-202ENST00000342020 ZC3H13Q5T200 1668 aaKnown RBP20.54■□□□□ 0.88
CTSL-202ENST00000342020 MTUS2Q5JR59 1369 aa20.54■□□□□ 0.88
CTSL-202ENST00000342020 XIRP1Q702N8 1843 aaKnown RBP20.52■□□□□ 0.88
CTSL-202ENST00000342020 CCDC141Q6ZP82 1450 aa20.5■□□□□ 0.87
CTSL-202ENST00000342020 FAM135BQ49AJ0 1406 aa20.49■□□□□ 0.87
CTSL-202ENST00000342020 ERVK-7P63135 1459 aa20.46■□□□□ 0.87
CTSL-202ENST00000342020 SCAF11Q99590 1463 aaKnown RBP20.46■□□□□ 0.87
CTSL-202ENST00000342020 ABCC3O15438 1527 aa20.46■□□□□ 0.87
CTSL-202ENST00000342020 SETD1AO15047 1707 aaKnown RBP20.44■□□□□ 0.86
CTSL-202ENST00000342020 UBR1Q8IWV7 1749 aa20.44■□□□□ 0.86
CTSL-202ENST00000342020 LTKP29376 864 aa20.44■□□□□ 0.86
CTSL-202ENST00000342020 CEP162Q5TB80 1403 aa20.44■□□□□ 0.86
CTSL-202ENST00000342020 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
CTSL-202ENST00000342020 EHBP1L1Q8N3D4 1523 aa20.43■□□□□ 0.86
CTSL-202ENST00000342020 RSPH4AQ5TD94 716 aa20.42■□□□□ 0.86
CTSL-202ENST00000342020 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
CTSL-202ENST00000342020 CAMSAP2Q08AD1 1489 aa20.42■□□□□ 0.86
CTSL-202ENST00000342020 ARHGAP23Q9P227 1491 aa20.42■□□□□ 0.86
CTSL-202ENST00000342020 SLIT1O75093 1534 aa20.4■□□□□ 0.86
CTSL-202ENST00000342020 CFAP65Q6ZU64 1925 aaKnown RBP20.39■□□□□ 0.86
CTSL-202ENST00000342020 TXNDC2Q86VQ3 553 aa20.39■□□□□ 0.85
CTSL-202ENST00000342020 ROBO1Q9Y6N7 1651 aa20.38■□□□□ 0.85
CTSL-202ENST00000342020 SRCAPQ6ZRS2 3230 aa20.37■□□□□ 0.85
CTSL-202ENST00000342020 TMEM94Q12767 1356 aa20.36■□□□□ 0.85
CTSL-202ENST00000342020 ARHGEF5Q12774 1597 aa20.36■□□□□ 0.85
CTSL-202ENST00000342020 MROH1Q8NDA8 1641 aa20.35■□□□□ 0.85
CTSL-202ENST00000342020 TSPY4P0CV99 314 aa20.34■□□□□ 0.85
CTSL-202ENST00000342020 TSPY10P0CW01 314 aa20.34■□□□□ 0.85
CTSL-202ENST00000342020 CEP152O94986 1710 aa20.33■□□□□ 0.84
CTSL-202ENST00000342020 MAP3K1Q13233 1512 aa20.32■□□□□ 0.84
CTSL-202ENST00000342020 EID1Q9Y6B2 187 aa20.32■□□□□ 0.84
CTSL-202ENST00000342020 EIF2AK4Q9P2K8 1649 aaKnown RBP20.31■□□□□ 0.84
CTSL-202ENST00000342020 UPF1Q92900 1129 aaKnown RBP eCLIP20.3■□□□□ 0.84
CTSL-202ENST00000342020 KCNA6P17658 529 aa20.29■□□□□ 0.84
CTSL-202ENST00000342020 RBM33Q96EV2 1170 aaKnown RBP20.29■□□□□ 0.84
CTSL-202ENST00000342020 LRRC9Q6ZRR7 1453 aa20.29■□□□□ 0.84
CTSL-202ENST00000342020 TMEM2Q9UHN6 1383 aa20.28■□□□□ 0.84
CTSL-202ENST00000342020 MAST1Q9Y2H9 1570 aa20.28■□□□□ 0.84
CTSL-202ENST00000342020 JCADQ9P266 1359 aa20.27■□□□□ 0.84
CTSL-202ENST00000342020 PROSER2Q86WR7 435 aaPredicted RBP20.27■□□□□ 0.84
CTSL-202ENST00000342020 PHLPP1O60346 1717 aa20.26■□□□□ 0.83
CTSL-202ENST00000342020 ARHGAP31Q2M1Z3 1444 aa20.26■□□□□ 0.83
CTSL-202ENST00000342020 PIK3C2BO00750 1634 aa20.25■□□□□ 0.83
CTSL-202ENST00000342020 PRDM15P57071 1507 aaPredicted RBP20.24■□□□□ 0.83
CTSL-202ENST00000342020 TET3O43151 1660 aa20.23■□□□□ 0.83
CTSL-202ENST00000342020 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
CTSL-202ENST00000342020 SLAIN2Q9P270 581 aa20.22■□□□□ 0.83
CTSL-202ENST00000342020 LRP6O75581 1613 aa20.21■□□□□ 0.83
CTSL-202ENST00000342020 NKTRP30414 1462 aaKnown RBP20.21■□□□□ 0.83
CTSL-202ENST00000342020 NWD1Q149M9 1564 aa20.2■□□□□ 0.82
CTSL-202ENST00000342020 COL16A1Q07092 1604 aaPredicted RBP20.2■□□□□ 0.82
CTSL-202ENST00000342020 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
CTSL-202ENST00000342020 MSH6P52701 1360 aa20.19■□□□□ 0.82
CTSL-202ENST00000342020 EFCAB6Q5THR3 1501 aa20.18■□□□□ 0.82
CTSL-202ENST00000342020 KDM5AP29375 1690 aaKnown RBP20.18■□□□□ 0.82
CTSL-202ENST00000342020 DUOX2Q9NRD8 1548 aa20.17■□□□□ 0.82
CTSL-202ENST00000342020 ZNF772Q68DY9 489 aaPredicted RBP20.17■□□□□ 0.82
CTSL-202ENST00000342020 STAG3Q9UJ98 1225 aa20.17■□□□□ 0.82
CTSL-202ENST00000342020 SPATA31A6Q5VVP1 1343 aa20.16■□□□□ 0.82
CTSL-202ENST00000342020 IDI1Q13907 227 aa20.15■□□□□ 0.82
CTSL-202ENST00000342020 FGD6Q6ZV73 1430 aa20.14■□□□□ 0.81
CTSL-202ENST00000342020 MEX3CQ5U5Q3 659 aaKnown RBP20.13■□□□□ 0.81
CTSL-202ENST00000342020 RXRBP28702 533 aa20.1■□□□□ 0.81
CTSL-202ENST00000342020 KIF15Q9NS87 1388 aa20.09■□□□□ 0.81
CTSL-202ENST00000342020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.09■□□□□ 0.812e-7■■■□□ 16.6
CTSL-202ENST00000342020 CDK12Q9NYV4 1490 aaPredicted RBP20.09■□□□□ 0.81
CTSL-202ENST00000342020 ERBINQ96RT1 1412 aa20.09■□□□□ 0.81
CTSL-202ENST00000342020 SHPRHQ149N8 1683 aa20.08■□□□□ 0.81
CTSL-202ENST00000342020 CHD2O14647 1828 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms