RNA–Protein interactions for RNA: ENST00000342020.5

CTSL-202, Transcript of cathepsin L, humanhuman

TSL 2 BASIC

Gene CTSL, Length 933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-202ENST00000342020 NISCHQ9Y2I1 1504 aa32.53■■■□□ 2.8
CTSL-202ENST00000342020 ABCC9O60706 1549 aa30.17■■■□□ 2.42
CTSL-202ENST00000342020 CCDC180Q9P1Z9 1646 aa29.46■■■□□ 2.31
CTSL-202ENST00000342020 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
CTSL-202ENST00000342020 RB1CC1Q8TDY2 1594 aa28.38■■■□□ 2.13
CTSL-202ENST00000342020 NACADO15069 1562 aa28.03■■■□□ 2.08
CTSL-202ENST00000342020 PABPN1Q86U42 306 aaKnown RBP eCLIP27.99■■■□□ 2.07
CTSL-202ENST00000342020 UNC13AQ9UPW8 1703 aa27.76■■■□□ 2.03
CTSL-202ENST00000342020 DCAF8L2P0C7V8 631 aa27.72■■■□□ 2.03
CTSL-202ENST00000342020 BICRAQ9NZM4 1560 aa27.64■■■□□ 2.01
CTSL-202ENST00000342020 MYO15BQ96JP2 1530 aa27.43■■□□□ 1.98
CTSL-202ENST00000342020 CECR2Q9BXF3 1484 aa27.25■■□□□ 1.95
CTSL-202ENST00000342020 CC2D2AQ9P2K1 1620 aa27.21■■□□□ 1.95
CTSL-202ENST00000342020 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.94
CTSL-202ENST00000342020 DNAJC5Q9H3Z4 198 aa27.08■■□□□ 1.93
CTSL-202ENST00000342020 EIF4G1Q04637 1599 aaKnown RBP26.98■■□□□ 1.91
CTSL-202ENST00000342020 DCAF1Q9Y4B6 1507 aa26.83■■□□□ 1.89
CTSL-202ENST00000342020 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
CTSL-202ENST00000342020 ZCCHC6Q5VYS8 1495 aaKnown RBP26.81■■□□□ 1.88
CTSL-202ENST00000342020 CUX2O14529 1486 aa26.27■■□□□ 1.8
CTSL-202ENST00000342020 ERCC6Q03468 1493 aa26.06■■□□□ 1.76
CTSL-202ENST00000342020 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
CTSL-202ENST00000342020 NESP48681 1621 aa25.74■■□□□ 1.71
CTSL-202ENST00000342020 ATAD2BQ9ULI0 1458 aa25.73■■□□□ 1.71
CTSL-202ENST00000342020 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
CTSL-202ENST00000342020 THOC2Q8NI27 1593 aaKnown RBP25.6■■□□□ 1.69
CTSL-202ENST00000342020 SMARCA2P51531 1590 aa25.59■■□□□ 1.69
CTSL-202ENST00000342020 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
CTSL-202ENST00000342020 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
CTSL-202ENST00000342020 BAZ1BQ9UIG0 1483 aaKnown RBP25.42■■□□□ 1.66
CTSL-202ENST00000342020 LAMC3Q9Y6N6 1575 aa25.4■■□□□ 1.66
CTSL-202ENST00000342020 KIF21AQ7Z4S6 1674 aa25.35■■□□□ 1.65
CTSL-202ENST00000342020 PEG3Q9GZU2 1588 aa25.29■■□□□ 1.64
CTSL-202ENST00000342020 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
CTSL-202ENST00000342020 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
CTSL-202ENST00000342020 MRC2Q9UBG0 1479 aa25.12■■□□□ 1.61
CTSL-202ENST00000342020 CADPSQ9ULU8 1353 aa25.08■■□□□ 1.61
CTSL-202ENST00000342020 WDR62O43379 1518 aa25.08■■□□□ 1.61
CTSL-202ENST00000342020 MROH2BQ7Z745 1585 aa25.07■■□□□ 1.6
CTSL-202ENST00000342020 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
CTSL-202ENST00000342020 CEP164Q9UPV0 1460 aa24.87■■□□□ 1.57
CTSL-202ENST00000342020 FANCD2Q9BXW9 1451 aa24.79■■□□□ 1.56
CTSL-202ENST00000342020 WIZO95785 1651 aa24.72■■□□□ 1.55
CTSL-202ENST00000342020 RIMBP3CA6NJZ7 1639 aa24.72■■□□□ 1.55
CTSL-202ENST00000342020 RIMBP3BA6NNM3 1639 aa24.72■■□□□ 1.55
CTSL-202ENST00000342020 RIMBP3Q9UFD9 1639 aa24.72■■□□□ 1.55
CTSL-202ENST00000342020 URB2Q14146 1524 aaKnown RBP24.66■■□□□ 1.54
CTSL-202ENST00000342020 CFTRP13569 1480 aa24.65■■□□□ 1.54
CTSL-202ENST00000342020 ARHGEF11O15085 1522 aa24.57■■□□□ 1.52
CTSL-202ENST00000342020 ZNF608Q9ULD9 1512 aaPredicted RBP24.47■■□□□ 1.51
CTSL-202ENST00000342020 CYB5RLQ6IPT4 315 aa24.42■■□□□ 1.5
CTSL-202ENST00000342020 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
CTSL-202ENST00000342020 TRHP20396 242 aaPredicted RBP24.35■■□□□ 1.49
CTSL-202ENST00000342020 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
CTSL-202ENST00000342020 PRDM2Q13029 1718 aa24.31■■□□□ 1.48
CTSL-202ENST00000342020 RSF1Q96T23 1441 aaPredicted RBP24.3■■□□□ 1.48
CTSL-202ENST00000342020 ARAP1Q96P48 1450 aa24.3■■□□□ 1.48
CTSL-202ENST00000342020 EIF4G3O43432 1585 aaKnown RBP24.26■■□□□ 1.47
CTSL-202ENST00000342020 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
CTSL-202ENST00000342020 CHD1O14646 1710 aa24.21■■□□□ 1.47
CTSL-202ENST00000342020 AQRO60306 1485 aaKnown RBP eCLIP24.15■■□□□ 1.467e-6■□□□□ 9.9
CTSL-202ENST00000342020 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
CTSL-202ENST00000342020 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
CTSL-202ENST00000342020 CCDC88BA6NC98 1476 aa24.11■■□□□ 1.45
CTSL-202ENST00000342020 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
CTSL-202ENST00000342020 FBLN2P98095 1184 aa24.09■■□□□ 1.45
CTSL-202ENST00000342020 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.45
CTSL-202ENST00000342020 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
CTSL-202ENST00000342020 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
CTSL-202ENST00000342020 RAD54L2Q9Y4B4 1467 aa23.89■■□□□ 1.42
CTSL-202ENST00000342020 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.41
CTSL-202ENST00000342020 SNAPC4Q5SXM2 1469 aa23.87■■□□□ 1.41
CTSL-202ENST00000342020 SOGA1O94964 1423 aa23.84■■□□□ 1.41
CTSL-202ENST00000342020 SYNJ1O43426 1573 aa23.82■■□□□ 1.4
CTSL-202ENST00000342020 CHMP7Q8WUX9 453 aaPredicted RBP23.8■■□□□ 1.4
CTSL-202ENST00000342020 MAGI1Q96QZ7 1491 aaPredicted RBP23.77■■□□□ 1.4
CTSL-202ENST00000342020 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
CTSL-202ENST00000342020 GAPVD1Q14C86 1478 aa23.73■■□□□ 1.39
CTSL-202ENST00000342020 FGD5Q6ZNL6 1462 aa23.71■■□□□ 1.39
CTSL-202ENST00000342020 SYNJ2O15056 1496 aa23.7■■□□□ 1.38
CTSL-202ENST00000342020 GRIN2BQ13224 1484 aa23.7■■□□□ 1.38
CTSL-202ENST00000342020 CUX1P39880 1505 aa23.59■■□□□ 1.37
CTSL-202ENST00000342020 ERCC6L2Q5T890 1561 aa23.54■■□□□ 1.36
CTSL-202ENST00000342020 PBRM1Q86U86 1689 aa23.54■■□□□ 1.36
CTSL-202ENST00000342020 ABCA5Q8WWZ7 1642 aa23.43■■□□□ 1.34
CTSL-202ENST00000342020 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
CTSL-202ENST00000342020 KIF13AQ9H1H9 1805 aa23.4■■□□□ 1.34
CTSL-202ENST00000342020 ABCA10Q8WWZ4 1543 aa23.4■■□□□ 1.34
CTSL-202ENST00000342020 GRIN2AQ12879 1464 aa23.4■■□□□ 1.34
CTSL-202ENST00000342020 NUP160Q12769 1436 aa23.37■■□□□ 1.33
CTSL-202ENST00000342020 SHROOM2Q13796 1616 aa23.33■■□□□ 1.33
CTSL-202ENST00000342020 ADAMTS12P58397 1594 aa23.3■■□□□ 1.32
CTSL-202ENST00000342020 KDM4FA0A1W2PPD8 638 aa23.22■■□□□ 1.31
CTSL-202ENST00000342020 ILDR1Q86SU0 546 aaPredicted RBP23.21■■□□□ 1.31
CTSL-202ENST00000342020 FHAD1B1AJZ9 1412 aa23.2■■□□□ 1.3
CTSL-202ENST00000342020 FAM69CQ0P6D2 419 aa23.2■■□□□ 1.3
CTSL-202ENST00000342020 ABCC10Q5T3U5 1492 aa23.19■■□□□ 1.3
CTSL-202ENST00000342020 PRG4Q92954 1404 aaPredicted RBP23.18■■□□□ 1.3
CTSL-202ENST00000342020 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
CTSL-202ENST00000342020 DIP2BQ9P265 1576 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms