RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 PRKRIP1Q9H875 184 aaPredicted RBP22.05■■□□□ 1.12
CCDC144A-202ENST00000340621 SUPT16HQ9Y5B9 1047 aaKnown RBP22.03■■□□□ 1.12
CCDC144A-202ENST00000340621 IQGAP3Q86VI3 1631 aa22.03■■□□□ 1.12
CCDC144A-202ENST00000340621 RTEL1-TNFRSF6BF6WH68 1400 aa22.03■■□□□ 1.12
CCDC144A-202ENST00000340621 ASXL2Q76L83 1435 aa22.02■■□□□ 1.12
CCDC144A-202ENST00000340621 FANCAO15360 1455 aa22.02■■□□□ 1.12
CCDC144A-202ENST00000340621 MAGI2Q86UL8 1455 aa22.02■■□□□ 1.12
CCDC144A-202ENST00000340621 KDM5CP41229 1560 aa22.02■■□□□ 1.11
CCDC144A-202ENST00000340621 CCDC184Q52MB2 194 aa22.01■■□□□ 1.11
CCDC144A-202ENST00000340621 POLR3GLQ9BT43 218 aa22■■□□□ 1.11
CCDC144A-202ENST00000340621 BCORL1Q5H9F3 1711 aa21.99■■□□□ 1.11
CCDC144A-202ENST00000340621 ST20-MTHFSA0A0A6YYL1 179 aa21.98■■□□□ 1.11
CCDC144A-202ENST00000340621 ARID4BQ4LE39 1312 aaPredicted RBP21.98■■□□□ 1.11
CCDC144A-202ENST00000340621 ABCA9Q8IUA7 1624 aa21.97■■□□□ 1.11
CCDC144A-202ENST00000340621 ATP10AO60312 1499 aa21.96■■□□□ 1.11
CCDC144A-202ENST00000340621 ZFYVE16Q7Z3T8 1539 aa21.96■■□□□ 1.11
CCDC144A-202ENST00000340621 ROCK2O75116 1388 aaKnown RBP21.96■■□□□ 1.11
CCDC144A-202ENST00000340621 PRAG1Q86YV5 1406 aa21.96■■□□□ 1.11
CCDC144A-202ENST00000340621 NPM1P06748 294 aaKnown RBP eCLIP21.96■■□□□ 1.11
CCDC144A-202ENST00000340621 PELP1Q8IZL8 1130 aaKnown RBP21.96■■□□□ 1.11
CCDC144A-202ENST00000340621 POLR1AO95602 1720 aaPredicted RBP21.96■■□□□ 1.11
CCDC144A-202ENST00000340621 SCAPERQ9BY12 1400 aa21.95■■□□□ 1.11
CCDC144A-202ENST00000340621 HNRNPUQ00839 825 aaKnown RBP eCLIP21.94■■□□□ 1.1
CCDC144A-202ENST00000340621 NBPF1Q3BBV0 1214 aa21.94■■□□□ 1.1
CCDC144A-202ENST00000340621 A2MP01023 1474 aa21.93■■□□□ 1.1
CCDC144A-202ENST00000340621 ADGRL1O94910 1474 aa21.93■■□□□ 1.1
CCDC144A-202ENST00000340621 MYT1LQ9UL68 1186 aa21.92■■□□□ 1.1
CCDC144A-202ENST00000340621 DHX29Q7Z478 1369 aaKnown RBP21.92■■□□□ 1.1
CCDC144A-202ENST00000340621 MRS2Q9HD23 443 aa21.9■■□□□ 1.1
CCDC144A-202ENST00000340621 ATP7AQ04656 1500 aa21.89■■□□□ 1.09
CCDC144A-202ENST00000340621 KIF3BO15066 747 aa21.88■■□□□ 1.09
CCDC144A-202ENST00000340621 CNGB1Q14028 1251 aaPredicted RBP21.87■■□□□ 1.09
CCDC144A-202ENST00000340621 FAM9BQ8IZU0 186 aa21.86■■□□□ 1.09
CCDC144A-202ENST00000340621 INO80Q9ULG1 1556 aaPredicted RBP21.86■■□□□ 1.09
CCDC144A-202ENST00000340621 GPRASP1Q5JY77 1395 aa21.85■■□□□ 1.09
CCDC144A-202ENST00000340621 TRPM1Q7Z4N2 1603 aa21.85■■□□□ 1.09
CCDC144A-202ENST00000340621 FKBP8Q14318 412 aa21.83■■□□□ 1.09
CCDC144A-202ENST00000340621 E9PCH4 1651 aa21.82■■□□□ 1.08
CCDC144A-202ENST00000340621 KANK1Q14678 1352 aa21.82■■□□□ 1.08
CCDC144A-202ENST00000340621 PTPRTO14522 1441 aa21.82■■□□□ 1.08
CCDC144A-202ENST00000340621 CD109Q6YHK3 1445 aa21.81■■□□□ 1.08
CCDC144A-202ENST00000340621 DEPDC5O75140 1603 aa21.81■■□□□ 1.08
CCDC144A-202ENST00000340621 TRPM2O94759 1503 aa21.77■■□□□ 1.08
CCDC144A-202ENST00000340621 VWDEQ8N2E2 1590 aa21.77■■□□□ 1.07
CCDC144A-202ENST00000340621 ZNF518AQ6AHZ1 1483 aa21.77■■□□□ 1.07
CCDC144A-202ENST00000340621 TESK2Q96S53 571 aa21.76■■□□□ 1.07
CCDC144A-202ENST00000340621 BCANQ96GW7 911 aa21.74■■□□□ 1.07
CCDC144A-202ENST00000340621 PRDM15P57071 1507 aaPredicted RBP21.74■■□□□ 1.07
CCDC144A-202ENST00000340621 NEFLP07196 543 aa21.74■■□□□ 1.07
CCDC144A-202ENST00000340621 TET3O43151 1660 aa21.73■■□□□ 1.07
CCDC144A-202ENST00000340621 EIF2AK4Q9P2K8 1649 aaKnown RBP21.73■■□□□ 1.07
CCDC144A-202ENST00000340621 KIDINS220Q9ULH0 1771 aa21.73■■□□□ 1.07
CCDC144A-202ENST00000340621 LAMC1P11047 1609 aa21.72■■□□□ 1.07
CCDC144A-202ENST00000340621 MROH1Q8NDA8 1641 aa21.71■■□□□ 1.07
CCDC144A-202ENST00000340621 CLTCL1P53675 1640 aa21.7■■□□□ 1.06
CCDC144A-202ENST00000340621 STAC3Q96MF2 364 aa21.7■■□□□ 1.06
CCDC144A-202ENST00000340621 DISP3Q9P2K9 1392 aa21.7■■□□□ 1.06
CCDC144A-202ENST00000340621 POGZQ7Z3K3 1410 aa21.7■■□□□ 1.06
CCDC144A-202ENST00000340621 SPHKAPQ2M3C7 1700 aa21.69■■□□□ 1.06
CCDC144A-202ENST00000340621 ZBED9Q6R2W3 1325 aa21.68■■□□□ 1.06
CCDC144A-202ENST00000340621 MLH3Q9UHC1 1453 aa21.66■■□□□ 1.06
CCDC144A-202ENST00000340621 COL17A1Q9UMD9 1497 aaPredicted RBP21.66■■□□□ 1.06
CCDC144A-202ENST00000340621 PER1O15534 1290 aaPredicted RBP21.66■■□□□ 1.06
CCDC144A-202ENST00000340621 TMF1P82094 1093 aa21.66■■□□□ 1.06
CCDC144A-202ENST00000340621 RALBP1Q15311 655 aa21.66■■□□□ 1.06
CCDC144A-202ENST00000340621 TMC1Q8TDI8 760 aa21.66■■□□□ 1.06
CCDC144A-202ENST00000340621 PNISRQ8TF01 805 aaKnown RBP21.65■■□□□ 1.06
CCDC144A-202ENST00000340621 RAPGEF3O95398 923 aa21.65■■□□□ 1.06
CCDC144A-202ENST00000340621 MADDQ8WXG6 1647 aa21.65■■□□□ 1.06
CCDC144A-202ENST00000340621 CEP152O94986 1710 aa21.64■■□□□ 1.06
CCDC144A-202ENST00000340621 KTN1Q86UP2 1357 aaKnown RBP21.64■■□□□ 1.05
CCDC144A-202ENST00000340621 CFAP74Q9C0B2 1584 aa21.64■■□□□ 1.05
CCDC144A-202ENST00000340621 GGT6Q6P531 493 aa21.63■■□□□ 1.05
CCDC144A-202ENST00000340621 CYB5RLQ6IPT4 315 aa21.63■■□□□ 1.05
CCDC144A-202ENST00000340621 MYBBP1AQ9BQG0 1328 aaKnown RBP21.63■■□□□ 1.05
CCDC144A-202ENST00000340621 UGGT1Q9NYU2 1555 aa21.63■■□□□ 1.05
CCDC144A-202ENST00000340621 RNF17Q9BXT8 1623 aaKnown RBP21.62■■□□□ 1.05
CCDC144A-202ENST00000340621 EFCAB6Q5THR3 1501 aa21.62■■□□□ 1.05
CCDC144A-202ENST00000340621 PANK3Q9H999 370 aa21.61■■□□□ 1.05
CCDC144A-202ENST00000340621 LMTK2Q8IWU2 1503 aa21.6■■□□□ 1.05
CCDC144A-202ENST00000340621 FRMPD1Q5SYB0 1578 aa21.6■■□□□ 1.05
CCDC144A-202ENST00000340621 NEO1Q92859 1461 aa21.59■■□□□ 1.05
CCDC144A-202ENST00000340621 BRD4O60885 1362 aaPredicted RBP21.58■■□□□ 1.05
CCDC144A-202ENST00000340621 PPRC1Q5VV67 1664 aaKnown RBP21.58■■□□□ 1.04
CCDC144A-202ENST00000340621 ADGRF5Q8IZF2 1346 aa21.57■■□□□ 1.04
CCDC144A-202ENST00000340621 HECW2Q9P2P5 1572 aa21.57■■□□□ 1.04
CCDC144A-202ENST00000340621 SCAF11Q99590 1463 aaKnown RBP21.57■■□□□ 1.04
CCDC144A-202ENST00000340621 NEURL4Q96JN8 1562 aa21.57■■□□□ 1.04
CCDC144A-202ENST00000340621 CFAP70Q5T0N1 1121 aa21.56■■□□□ 1.04
CCDC144A-202ENST00000340621 PARD3Q8TEW0 1356 aa21.56■■□□□ 1.04
CCDC144A-202ENST00000340621 WASHC2CQ9Y4E1 1318 aa21.55■■□□□ 1.04
CCDC144A-202ENST00000340621 IRX6P78412 446 aaPredicted RBP21.55■■□□□ 1.04
CCDC144A-202ENST00000340621 CC2D1BQ5T0F9 858 aaKnown RBP21.54■■□□□ 1.04
CCDC144A-202ENST00000340621 NPATQ14207 1427 aa21.54■■□□□ 1.04
CCDC144A-202ENST00000340621 NLRP13Q86W25 1043 aa21.53■■□□□ 1.04
CCDC144A-202ENST00000340621 SENP3-EIF4A1A0A087X0R7 540 aa21.53■■□□□ 1.04
CCDC144A-202ENST00000340621 CHGAP10645 457 aaKnown RBP21.52■■□□□ 1.04
CCDC144A-202ENST00000340621 ABCA6Q8N139 1617 aa21.52■■□□□ 1.04
CCDC144A-202ENST00000340621 IQGAP1P46940 1657 aa21.52■■□□□ 1.04
CCDC144A-202ENST00000340621 LRPPRCP42704 1394 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms