RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 NISCHQ9Y2I1 1504 aa34.33■■■■□ 3.09
CCDC144A-202ENST00000340621 CCDC180Q9P1Z9 1646 aa29.4■■■□□ 2.3
CCDC144A-202ENST00000340621 ZCCHC6Q5VYS8 1495 aaKnown RBP28.93■■■□□ 2.22
CCDC144A-202ENST00000340621 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
CCDC144A-202ENST00000340621 DCAF8L2P0C7V8 631 aa28.52■■■□□ 2.16
CCDC144A-202ENST00000340621 DCAF1Q9Y4B6 1507 aa28.23■■■□□ 2.11
CCDC144A-202ENST00000340621 SUPT5HO00267 1087 aaKnown RBP28.03■■■□□ 2.08
CCDC144A-202ENST00000340621 MYO15BQ96JP2 1530 aa27.63■■■□□ 2.01
CCDC144A-202ENST00000340621 ABCC9O60706 1549 aa27.6■■■□□ 2.01
CCDC144A-202ENST00000340621 SCRIBQ14160 1630 aa27.39■■□□□ 1.98
CCDC144A-202ENST00000340621 NACADO15069 1562 aa27.34■■□□□ 1.97
CCDC144A-202ENST00000340621 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
CCDC144A-202ENST00000340621 RSF1Q96T23 1441 aaPredicted RBP26.98■■□□□ 1.91
CCDC144A-202ENST00000340621 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
CCDC144A-202ENST00000340621 CECR2Q9BXF3 1484 aa26.77■■□□□ 1.88
CCDC144A-202ENST00000340621 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
CCDC144A-202ENST00000340621 UNC13AQ9UPW8 1703 aa26.43■■□□□ 1.82
CCDC144A-202ENST00000340621 WIZO95785 1651 aa26.41■■□□□ 1.82
CCDC144A-202ENST00000340621 BAZ1AQ9NRL2 1556 aaPredicted RBP26.4■■□□□ 1.82
CCDC144A-202ENST00000340621 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
CCDC144A-202ENST00000340621 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
CCDC144A-202ENST00000340621 LOC105371045A0A1W2PR82 267 aa26.22■■□□□ 1.79
CCDC144A-202ENST00000340621 TRIM41Q8WV44 630 aa26.2■■□□□ 1.79
CCDC144A-202ENST00000340621 SMARCA4P51532 1647 aa26.2■■□□□ 1.79
CCDC144A-202ENST00000340621 TOP2AP11388 1531 aaKnown RBP26.05■■□□□ 1.76
CCDC144A-202ENST00000340621 CCDC88BA6NC98 1476 aa25.95■■□□□ 1.74
CCDC144A-202ENST00000340621 FAM9AQ8IZU1 332 aaPredicted RBP25.89■■□□□ 1.74
CCDC144A-202ENST00000340621 SMARCA2P51531 1590 aa25.88■■□□□ 1.73
CCDC144A-202ENST00000340621 EIF4G1Q04637 1599 aaKnown RBP25.87■■□□□ 1.73
CCDC144A-202ENST00000340621 PEG3Q9GZU2 1588 aa25.79■■□□□ 1.72
CCDC144A-202ENST00000340621 ATAD2BQ9ULI0 1458 aa25.7■■□□□ 1.71
CCDC144A-202ENST00000340621 PCGF6Q9BYE7 350 aa25.67■■□□□ 1.7
CCDC144A-202ENST00000340621 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
CCDC144A-202ENST00000340621 EHMT2Q96KQ7 1210 aa25.61■■□□□ 1.69
CCDC144A-202ENST00000340621 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
CCDC144A-202ENST00000340621 TRIM26Q12899 539 aaPredicted RBP25.36■■□□□ 1.65
CCDC144A-202ENST00000340621 SOGA1O94964 1423 aa25.35■■□□□ 1.65
CCDC144A-202ENST00000340621 HRCP23327 699 aa25.35■■□□□ 1.65
CCDC144A-202ENST00000340621 WRNQ14191 1432 aaPredicted RBP eCLIP25.34■■□□□ 1.65
CCDC144A-202ENST00000340621 NCAPD3P42695 1498 aa25.33■■□□□ 1.65
CCDC144A-202ENST00000340621 HMGXB3Q12766 1538 aa25.24■■□□□ 1.63
CCDC144A-202ENST00000340621 RUSC2Q8N2Y8 1516 aa25.23■■□□□ 1.63
CCDC144A-202ENST00000340621 CSRNP3Q8WYN3 585 aa25.22■■□□□ 1.63
CCDC144A-202ENST00000340621 EEA1Q15075 1411 aa25.19■■□□□ 1.62
CCDC144A-202ENST00000340621 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
CCDC144A-202ENST00000340621 TNIKQ9UKE5 1360 aa25.05■■□□□ 1.6
CCDC144A-202ENST00000340621 UBTFP17480 764 aaKnown RBP25.01■■□□□ 1.59
CCDC144A-202ENST00000340621 PPARGC1BQ86YN6 1023 aaKnown RBP25■■□□□ 1.59
CCDC144A-202ENST00000340621 CEP162Q5TB80 1403 aa24.99■■□□□ 1.59
CCDC144A-202ENST00000340621 CFTRP13569 1480 aa24.96■■□□□ 1.59
CCDC144A-202ENST00000340621 TOP2BQ02880 1626 aa24.95■■□□□ 1.59
CCDC144A-202ENST00000340621 GOLGA3Q08378 1498 aa24.95■■□□□ 1.58
CCDC144A-202ENST00000340621 CEP164Q9UPV0 1460 aa24.88■■□□□ 1.57
CCDC144A-202ENST00000340621 CC2D2AQ9P2K1 1620 aa24.86■■□□□ 1.57
CCDC144A-202ENST00000340621 BIVM-ERCC5R4GMW8 1640 aa24.85■■□□□ 1.57
CCDC144A-202ENST00000340621 CUX1P39880 1505 aa24.83■■□□□ 1.56
CCDC144A-202ENST00000340621 KIF21BO75037 1637 aa24.81■■□□□ 1.56
CCDC144A-202ENST00000340621 CADPSQ9ULU8 1353 aa24.79■■□□□ 1.56
CCDC144A-202ENST00000340621 RAPGEF2Q9Y4G8 1499 aa24.75■■□□□ 1.55
CCDC144A-202ENST00000340621 TTBK1Q5TCY1 1321 aaPredicted RBP24.65■■□□□ 1.54
CCDC144A-202ENST00000340621 CLIP1P30622 1438 aa24.65■■□□□ 1.54
CCDC144A-202ENST00000340621 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
CCDC144A-202ENST00000340621 PRXQ9BXM0 1461 aa24.62■■□□□ 1.53
CCDC144A-202ENST00000340621 PRDM2Q13029 1718 aa24.61■■□□□ 1.53
CCDC144A-202ENST00000340621 ZEB1P37275 1124 aaPredicted RBP24.58■■□□□ 1.53
CCDC144A-202ENST00000340621 RANGAP1P46060 587 aaPredicted RBP24.57■■□□□ 1.52
CCDC144A-202ENST00000340621 ERICH3Q5RHP9 1530 aa24.53■■□□□ 1.52
CCDC144A-202ENST00000340621 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
CCDC144A-202ENST00000340621 VPS8Q8N3P4 1428 aa24.48■■□□□ 1.51
CCDC144A-202ENST00000340621 CUX2O14529 1486 aa24.45■■□□□ 1.51
CCDC144A-202ENST00000340621 FGD5Q6ZNL6 1462 aa24.45■■□□□ 1.51
CCDC144A-202ENST00000340621 NESP48681 1621 aa24.45■■□□□ 1.5
CCDC144A-202ENST00000340621 IGF1RP08069 1367 aa24.43■■□□□ 1.5
CCDC144A-202ENST00000340621 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
CCDC144A-202ENST00000340621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.39■■□□□ 1.5
CCDC144A-202ENST00000340621 APLP2Q06481 763 aa24.35■■□□□ 1.49
CCDC144A-202ENST00000340621 CCER1Q8TC90 406 aaPredicted RBP24.31■■□□□ 1.48
CCDC144A-202ENST00000340621 ARAP1Q96P48 1450 aa24.3■■□□□ 1.48
CCDC144A-202ENST00000340621 DNMBPQ6XZF7 1577 aa24.3■■□□□ 1.48
CCDC144A-202ENST00000340621 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
CCDC144A-202ENST00000340621 TOPBP1Q92547 1522 aa24.29■■□□□ 1.48
CCDC144A-202ENST00000340621 LAMC3Q9Y6N6 1575 aa24.27■■□□□ 1.48
CCDC144A-202ENST00000340621 RAD54L2Q9Y4B4 1467 aa24.27■■□□□ 1.48
CCDC144A-202ENST00000340621 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
CCDC144A-202ENST00000340621 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.46
CCDC144A-202ENST00000340621 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
CCDC144A-202ENST00000340621 URB2Q14146 1524 aaKnown RBP24.18■■□□□ 1.46
CCDC144A-202ENST00000340621 PDS5BQ9NTI5 1447 aa24.17■■□□□ 1.46
CCDC144A-202ENST00000340621 HNRNPUL2Q1KMD3 747 aaKnown RBP24.13■■□□□ 1.45
CCDC144A-202ENST00000340621 KANK4Q5T7N3 995 aaPredicted RBP24.13■■□□□ 1.45
CCDC144A-202ENST00000340621 TDRD9Q8NDG6 1382 aaKnown RBP24.02■■□□□ 1.44
CCDC144A-202ENST00000340621 KIF21AQ7Z4S6 1674 aa23.97■■□□□ 1.43
CCDC144A-202ENST00000340621 P3H3Q8IVL6 736 aa23.95■■□□□ 1.42
CCDC144A-202ENST00000340621 WDR97A6NE52 1622 aa23.94■■□□□ 1.42
CCDC144A-202ENST00000340621 CUL7Q14999 1698 aa23.93■■□□□ 1.42
CCDC144A-202ENST00000340621 GAPVD1Q14C86 1478 aa23.92■■□□□ 1.42
CCDC144A-202ENST00000340621 ABCA5Q8WWZ7 1642 aa23.89■■□□□ 1.41
CCDC144A-202ENST00000340621 RRBP1Q9P2E9 1410 aaKnown RBP23.85■■□□□ 1.41
CCDC144A-202ENST00000340621 FHAD1B1AJZ9 1412 aa23.85■■□□□ 1.41
CCDC144A-202ENST00000340621 FHOD3Q2V2M9 1422 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms