RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 STK31Q9BXU1 1019 aa9.78□□□□□ -0.84
TRIM2-201ENST00000338700 PODXL2Q9NZ53 605 aa9.78□□□□□ -0.84
TRIM2-201ENST00000338700 ISY1Q9ULR0 285 aaKnown RBP9.78□□□□□ -0.84
TRIM2-201ENST00000338700 DNTTIP2Q5QJE6 756 aaKnown RBP9.77□□□□□ -0.84
TRIM2-201ENST00000338700 KIAA1211Q6ZU35 1233 aa9.77□□□□□ -0.85
TRIM2-201ENST00000338700 HDAC5Q9UQL6 1122 aa9.77□□□□□ -0.85
TRIM2-201ENST00000338700 B4GALNT3Q6L9W6 998 aa9.76□□□□□ -0.85
TRIM2-201ENST00000338700 NRDCO43847 1150 aa9.76□□□□□ -0.85
TRIM2-201ENST00000338700 AMPHP49418 695 aa9.76□□□□□ -0.85
TRIM2-201ENST00000338700 PLCB2Q00722 1185 aa9.76□□□□□ -0.85
TRIM2-201ENST00000338700 LMOD3Q0VAK6 560 aa9.76□□□□□ -0.85
TRIM2-201ENST00000338700 ITPRIPQ8IWB1 547 aa9.75□□□□□ -0.85
TRIM2-201ENST00000338700 THEMISQ8N1K5 641 aaPredicted RBP9.75□□□□□ -0.85
TRIM2-201ENST00000338700 NUTM2FA1L443 756 aa9.75□□□□□ -0.85
TRIM2-201ENST00000338700 RWDD1Q9H446 243 aaPredicted RBP9.75□□□□□ -0.85
TRIM2-201ENST00000338700 CUX1P39880 1505 aa9.75□□□□□ -0.85
TRIM2-201ENST00000338700 APBB1O00213 710 aa9.74□□□□□ -0.85
TRIM2-201ENST00000338700 GNL2Q13823 731 aaKnown RBP9.74□□□□□ -0.85
TRIM2-201ENST00000338700 CCDC144AA2RUR9 1427 aa9.74□□□□□ -0.85
TRIM2-201ENST00000338700 TAF7LQ5H9L4 462 aa9.74□□□□□ -0.85
TRIM2-201ENST00000338700 GPATCH3Q96I76 525 aa9.74□□□□□ -0.85
TRIM2-201ENST00000338700 RCAN3Q9UKA8 241 aa9.73□□□□□ -0.85
TRIM2-201ENST00000338700 DMRT2Q9Y5R5 561 aa9.73□□□□□ -0.85
TRIM2-201ENST00000338700 GORABQ5T7V8 394 aa9.73□□□□□ -0.85
TRIM2-201ENST00000338700 L3MBTL2Q969R5 705 aa9.73□□□□□ -0.85
TRIM2-201ENST00000338700 NOP58Q9Y2X3 529 aaKnown RBP9.73□□□□□ -0.85
TRIM2-201ENST00000338700 DEKP35659 375 aaKnown RBP9.73□□□□□ -0.85
TRIM2-201ENST00000338700 RUSC2Q8N2Y8 1516 aa9.72□□□□□ -0.85
TRIM2-201ENST00000338700 TRAK1Q9UPV9 953 aa9.72□□□□□ -0.85
TRIM2-201ENST00000338700 KIAA0586Q9BVV6 1533 aa9.72□□□□□ -0.85
TRIM2-201ENST00000338700 PROSER2Q86WR7 435 aaPredicted RBP9.72□□□□□ -0.85
TRIM2-201ENST00000338700 CHMP3Q9Y3E7 222 aa9.72□□□□□ -0.85
TRIM2-201ENST00000338700 PIP4K2BP78356 416 aa9.72□□□□□ -0.85
TRIM2-201ENST00000338700 PSME1Q06323 249 aa9.72□□□□□ -0.85
TRIM2-201ENST00000338700 ANKLE2Q86XL3 938 aa9.72□□□□□ -0.85
TRIM2-201ENST00000338700 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRIM2-201ENST00000338700 CD109Q6YHK3 1445 aa9.72□□□□□ -0.85
TRIM2-201ENST00000338700 PMFBP1Q8TBY8 1022 aa9.72□□□□□ -0.85
TRIM2-201ENST00000338700 TOP2BQ02880 1626 aa9.72□□□□□ -0.85
TRIM2-201ENST00000338700 HMMRO75330 724 aa9.71□□□□□ -0.85
TRIM2-201ENST00000338700 ERICH6BQ5W0A0 696 aa9.71□□□□□ -0.85
TRIM2-201ENST00000338700 PHLDB1Q86UU1 1377 aa9.71□□□□□ -0.85
TRIM2-201ENST00000338700 SMC4Q9NTJ3 1288 aa9.71□□□□□ -0.85
TRIM2-201ENST00000338700 CLSTN1O94985 981 aa9.71□□□□□ -0.85
TRIM2-201ENST00000338700 SF3B2Q13435 895 aaKnown RBP9.71□□□□□ -0.86
TRIM2-201ENST00000338700 TXNDC2Q86VQ3 553 aa9.71□□□□□ -0.86
TRIM2-201ENST00000338700 PLEKHH2Q8IVE3 1493 aa9.7□□□□□ -0.86
TRIM2-201ENST00000338700 RAPGEF3O95398 923 aa9.7□□□□□ -0.86
TRIM2-201ENST00000338700 AFAP1Q8N556 730 aa9.7□□□□□ -0.86
TRIM2-201ENST00000338700 LTV1Q96GA3 475 aaPredicted RBP9.7□□□□□ -0.86
TRIM2-201ENST00000338700 URB2Q14146 1524 aaKnown RBP9.7□□□□□ -0.86
TRIM2-201ENST00000338700 GRIN2AQ12879 1464 aa9.7□□□□□ -0.86
TRIM2-201ENST00000338700 G3V3G9 751 aa9.7□□□□□ -0.86
TRIM2-201ENST00000338700 DCAF8Q5TAQ9 597 aa9.7□□□□□ -0.86
TRIM2-201ENST00000338700 ABCA10Q8WWZ4 1543 aa9.7□□□□□ -0.86
TRIM2-201ENST00000338700 NLRP13Q86W25 1043 aa9.69□□□□□ -0.86
TRIM2-201ENST00000338700 MYOM3Q5VTT5 1437 aa9.69□□□□□ -0.86
TRIM2-201ENST00000338700 EVC2Q86UK5 1308 aa9.69□□□□□ -0.86
TRIM2-201ENST00000338700 KIF15Q9NS87 1388 aa9.69□□□□□ -0.86
TRIM2-201ENST00000338700 COG3Q96JB2 828 aa9.68□□□□□ -0.86
TRIM2-201ENST00000338700 MSH5O43196 834 aa9.68□□□□□ -0.86
TRIM2-201ENST00000338700 HTATSF1O43719 755 aaKnown RBP9.68□□□□□ -0.86
TRIM2-201ENST00000338700 CCDC146Q8IYE0 955 aa9.68□□□□□ -0.86
TRIM2-201ENST00000338700 PTMSP20962 102 aa9.67□□□□□ -0.86
TRIM2-201ENST00000338700 SLC4A10Q6U841 1118 aa9.67□□□□□ -0.86
TRIM2-201ENST00000338700 PKNOX2Q96KN3 472 aa9.67□□□□□ -0.86
TRIM2-201ENST00000338700 C1orf141Q5JVX7 400 aa9.67□□□□□ -0.86
TRIM2-201ENST00000338700 CENPJQ9HC77 1338 aaPredicted RBP9.67□□□□□ -0.86
TRIM2-201ENST00000338700 PDE3BQ13370 1112 aa9.67□□□□□ -0.86
TRIM2-201ENST00000338700 CUL7Q14999 1698 aa9.66□□□□□ -0.86
TRIM2-201ENST00000338700 IQGAP2Q13576 1575 aa9.66□□□□□ -0.86
TRIM2-201ENST00000338700 ZNF608Q9ULD9 1512 aaPredicted RBP9.66□□□□□ -0.86
TRIM2-201ENST00000338700 SCAPERQ9BY12 1400 aa9.66□□□□□ -0.86
TRIM2-201ENST00000338700 GTF2E1P29083 439 aaPredicted RBP9.66□□□□□ -0.86
TRIM2-201ENST00000338700 SPRYD3Q8NCJ5 442 aa9.66□□□□□ -0.86
TRIM2-201ENST00000338700 CGNL1Q0VF96 1302 aa9.66□□□□□ -0.86
TRIM2-201ENST00000338700 A0A0U1RQG5 324 aaPredicted RBP9.66□□□□□ -0.86
TRIM2-201ENST00000338700 ERICH3Q5RHP9 1530 aa9.66□□□□□ -0.86
TRIM2-201ENST00000338700 TEX14Q8IWB6 1497 aa9.66□□□□□ -0.86
TRIM2-201ENST00000338700 TRIM6-TRIM34B2RNG4 842 aa9.66□□□□□ -0.86
TRIM2-201ENST00000338700 PEG3Q9GZU2 1588 aa9.65□□□□□ -0.86
TRIM2-201ENST00000338700 DRC7Q8IY82 874 aa9.65□□□□□ -0.86
TRIM2-201ENST00000338700 MYBBP1AQ9BQG0 1328 aaKnown RBP9.65□□□□□ -0.86
TRIM2-201ENST00000338700 EFCAB5A4FU69 1503 aa9.65□□□□□ -0.87
TRIM2-201ENST00000338700 PLB1Q6P1J6 1458 aa9.65□□□□□ -0.87
TRIM2-201ENST00000338700 L1TD1Q5T7N2 865 aaKnown RBP9.64□□□□□ -0.87
TRIM2-201ENST00000338700 GBP4Q96PP9 640 aa9.64□□□□□ -0.87
TRIM2-201ENST00000338700 HECW1Q76N89 1606 aa9.64□□□□□ -0.87
TRIM2-201ENST00000338700 PANK3Q9H999 370 aa9.64□□□□□ -0.87
TRIM2-201ENST00000338700 CHAF1AQ13111 956 aaPredicted RBP9.64□□□□□ -0.87
TRIM2-201ENST00000338700 HSP90B1P14625 803 aaKnown RBP9.64□□□□□ -0.87
TRIM2-201ENST00000338700 TCERG1O14776 1098 aaKnown RBP9.64□□□□□ -0.87
TRIM2-201ENST00000338700 VSIG10Q8N0Z9 540 aa9.64□□□□□ -0.87
TRIM2-201ENST00000338700 ST20-MTHFSA0A0A6YYL1 179 aa9.63□□□□□ -0.87
TRIM2-201ENST00000338700 NUTM2BA6NNL0 878 aaPredicted RBP9.63□□□□□ -0.87
TRIM2-201ENST00000338700 NUTM2EB1AL46 878 aaPredicted RBP9.63□□□□□ -0.87
TRIM2-201ENST00000338700 NUTM2AQ8IVF1 878 aaPredicted RBP9.63□□□□□ -0.87
TRIM2-201ENST00000338700 CASKIN1Q8WXD9 1431 aa9.63□□□□□ -0.87
TRIM2-201ENST00000338700 FRAT2O75474 233 aaPredicted RBP9.63□□□□□ -0.87
TRIM2-201ENST00000338700 AKNAQ7Z591 1439 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms