RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 CENPQQ7L2Z9 268 aaPredicted RBP20.17■□□□□ 0.82
NPHP3-201ENST00000337331 CCDC146Q8IYE0 955 aa20.16■□□□□ 0.82
NPHP3-201ENST00000337331 CLUAP1Q96AJ1 413 aa20.16■□□□□ 0.82
NPHP3-201ENST00000337331 PDCL3Q9H2J4 239 aa20.15■□□□□ 0.82
NPHP3-201ENST00000337331 KIF3BO15066 747 aa20.15■□□□□ 0.82
NPHP3-201ENST00000337331 OS9Q13438 667 aaPredicted RBP20.15■□□□□ 0.82
NPHP3-201ENST00000337331 GBP4Q96PP9 640 aa20.15■□□□□ 0.82
NPHP3-201ENST00000337331 IPO8O15397 1037 aaKnown RBP20.14■□□□□ 0.82
NPHP3-201ENST00000337331 APBB1O00213 710 aa20.14■□□□□ 0.81
NPHP3-201ENST00000337331 ZRSR1Q15695 479 aaKnown RBP20.14■□□□□ 0.81
NPHP3-201ENST00000337331 RWDD1Q9H446 243 aaPredicted RBP20.14■□□□□ 0.81
NPHP3-201ENST00000337331 CFTRP13569 1480 aa20.12■□□□□ 0.81
NPHP3-201ENST00000337331 CCDC18Q5T9S5 1454 aa20.12■□□□□ 0.81
NPHP3-201ENST00000337331 ITPRIPQ8IWB1 547 aa20.12■□□□□ 0.81
NPHP3-201ENST00000337331 ZHX1Q9UKY1 873 aaPredicted RBP20.12■□□□□ 0.81
NPHP3-201ENST00000337331 PRDM10Q9NQV6 1147 aa20.12■□□□□ 0.81
NPHP3-201ENST00000337331 KCNJ4P48050 445 aa20.11■□□□□ 0.81
NPHP3-201ENST00000337331 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.11■□□□□ 0.81
NPHP3-201ENST00000337331 TRAK2O60296 914 aa20.11■□□□□ 0.81
NPHP3-201ENST00000337331 JPH4Q96JJ6 628 aa20.11■□□□□ 0.81
NPHP3-201ENST00000337331 MAP7D2Q96T17 732 aa20.11■□□□□ 0.81
NPHP3-201ENST00000337331 HDGFL2Q7Z4V5 671 aaPredicted RBP20.1■□□□□ 0.81
NPHP3-201ENST00000337331 FOXD4L1Q9NU39 408 aa20.1■□□□□ 0.81
NPHP3-201ENST00000337331 MYBBP1AQ9BQG0 1328 aaKnown RBP20.1■□□□□ 0.81
NPHP3-201ENST00000337331 MFAP1P55081 439 aaKnown RBP20.1■□□□□ 0.81
NPHP3-201ENST00000337331 HAP1P54257 671 aaPredicted RBP20.09■□□□□ 0.81
NPHP3-201ENST00000337331 PANK3Q9H999 370 aa20.09■□□□□ 0.81
NPHP3-201ENST00000337331 KIF15Q9NS87 1388 aa20.09■□□□□ 0.81
NPHP3-201ENST00000337331 DDX11L8A8MPP1 907 aa20.08■□□□□ 0.8
NPHP3-201ENST00000337331 FGD1P98174 961 aa20.08■□□□□ 0.8
NPHP3-201ENST00000337331 RSPH4AQ5TD94 716 aa20.08■□□□□ 0.8
NPHP3-201ENST00000337331 CLCN1P35523 988 aa20.07■□□□□ 0.8
NPHP3-201ENST00000337331 IGF1RP08069 1367 aa20.07■□□□□ 0.8
NPHP3-201ENST00000337331 SMC4Q9NTJ3 1288 aa20.06■□□□□ 0.8
NPHP3-201ENST00000337331 TAOK2Q9UL54 1235 aa20.06■□□□□ 0.8
NPHP3-201ENST00000337331 SMG6Q86US8 1419 aaKnown RBP20.05■□□□□ 0.8
NPHP3-201ENST00000337331 CENPJQ9HC77 1338 aaPredicted RBP20.05■□□□□ 0.8
NPHP3-201ENST00000337331 FGD5Q6ZNL6 1462 aa20.04■□□□□ 0.8
NPHP3-201ENST00000337331 USP47Q96K76 1375 aa20.04■□□□□ 0.8
NPHP3-201ENST00000337331 PMFBP1Q8TBY8 1022 aa20.04■□□□□ 0.8
NPHP3-201ENST00000337331 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
NPHP3-201ENST00000337331 PANK2Q9BZ23 570 aa20.04■□□□□ 0.8
NPHP3-201ENST00000337331 CNTLNQ9NXG0 1405 aa20.04■□□□□ 0.8
NPHP3-201ENST00000337331 SPAG9O60271 1321 aaKnown RBP20.03■□□□□ 0.8
NPHP3-201ENST00000337331 BBXQ8WY36 941 aaPredicted RBP20.03■□□□□ 0.8
NPHP3-201ENST00000337331 RTF1Q92541 710 aaKnown RBP20.03■□□□□ 0.8
NPHP3-201ENST00000337331 CDCA7LQ96GN5 454 aa20.03■□□□□ 0.8
NPHP3-201ENST00000337331 RAD54L2Q9Y4B4 1467 aa20.03■□□□□ 0.8
NPHP3-201ENST00000337331 GRPEL1Q9HAV7 217 aa20.03■□□□□ 0.8
NPHP3-201ENST00000337331 CHMP5Q9NZZ3 219 aa20.02■□□□□ 0.8
NPHP3-201ENST00000337331 PHLDB1Q86UU1 1377 aa20.02■□□□□ 0.8
NPHP3-201ENST00000337331 HDGFP51858 240 aaKnown RBP20.02■□□□□ 0.8
NPHP3-201ENST00000337331 CHAF1AQ13111 956 aaPredicted RBP20.01■□□□□ 0.79
NPHP3-201ENST00000337331 MAPK8IP2Q13387 824 aaPredicted RBP20.01■□□□□ 0.79
NPHP3-201ENST00000337331 NUTM2DQ5VT03 806 aaPredicted RBP20.01■□□□□ 0.79
NPHP3-201ENST00000337331 RRP7AQ9Y3A4 280 aaKnown RBP20.01■□□□□ 0.79
NPHP3-201ENST00000337331 EIF3AQ14152 1382 aaKnown RBP20.01■□□□□ 0.79
NPHP3-201ENST00000337331 TRAK1Q9UPV9 953 aa20.01■□□□□ 0.79
NPHP3-201ENST00000337331 CCDC7Q96M83 1385 aa20.01■□□□□ 0.79
NPHP3-201ENST00000337331 XRCC6P12956 609 aaKnown RBP eCLIP20■□□□□ 0.79
NPHP3-201ENST00000337331 ZNF771Q7L3S4 317 aaPredicted RBP20■□□□□ 0.79
NPHP3-201ENST00000337331 DDX49Q9Y6V7 483 aaKnown RBP20■□□□□ 0.79
NPHP3-201ENST00000337331 MCCP23508 829 aa19.99■□□□□ 0.79
NPHP3-201ENST00000337331 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
NPHP3-201ENST00000337331 GOLGA6L4A6NEF3 574 aa19.99■□□□□ 0.79
NPHP3-201ENST00000337331 KIAA2012Q0VF49 1180 aa19.99■□□□□ 0.79
NPHP3-201ENST00000337331 NAP1L2Q9ULW6 460 aaPredicted RBP19.99■□□□□ 0.79
NPHP3-201ENST00000337331 CALD1Q05682 793 aaKnown RBP19.99■□□□□ 0.79
NPHP3-201ENST00000337331 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
NPHP3-201ENST00000337331 BCL2L13Q9BXK5 485 aa19.98■□□□□ 0.79
NPHP3-201ENST00000337331 CFAP44Q96MT7 982 aa19.97■□□□□ 0.79
NPHP3-201ENST00000337331 KIF7Q2M1P5 1343 aa19.97■□□□□ 0.79
NPHP3-201ENST00000337331 TNNT3P45378 269 aaPredicted RBP19.97■□□□□ 0.79
NPHP3-201ENST00000337331 KIF21BO75037 1637 aa19.96■□□□□ 0.79
NPHP3-201ENST00000337331 MTERF4Q7Z6M4 381 aaKnown RBP19.96■□□□□ 0.79
NPHP3-201ENST00000337331 TERF2IPQ9NYB0 399 aa19.96■□□□□ 0.79
NPHP3-201ENST00000337331 MCM4P33991 863 aa19.95■□□□□ 0.78
NPHP3-201ENST00000337331 NASPP49321 788 aaPredicted RBP19.95■□□□□ 0.78
NPHP3-201ENST00000337331 ZNF644Q9H582 1327 aaPredicted RBP19.95■□□□□ 0.78
NPHP3-201ENST00000337331 FGD6Q6ZV73 1430 aa19.94■□□□□ 0.78
NPHP3-201ENST00000337331 APAF1O14727 1248 aa19.93■□□□□ 0.78
NPHP3-201ENST00000337331 UQCRHLA0A096LP55 91 aa19.93■□□□□ 0.78
NPHP3-201ENST00000337331 UQCRHP07919 91 aa19.93■□□□□ 0.78
NPHP3-201ENST00000337331 PTMSP20962 102 aa19.93■□□□□ 0.78
NPHP3-201ENST00000337331 SKOR2Q2VWA4 1001 aaPredicted RBP19.91■□□□□ 0.78
NPHP3-201ENST00000337331 COG6Q9Y2V7 657 aa19.9■□□□□ 0.78
NPHP3-201ENST00000337331 UACAQ9BZF9 1416 aa19.9■□□□□ 0.78
NPHP3-201ENST00000337331 PNISRQ8TF01 805 aaKnown RBP19.89■□□□□ 0.77
NPHP3-201ENST00000337331 CSPP1Q1MSJ5 1256 aa19.88■□□□□ 0.77
NPHP3-201ENST00000337331 RRBP1Q9P2E9 1410 aaKnown RBP19.88■□□□□ 0.77
NPHP3-201ENST00000337331 CUX1P39880 1505 aa19.87■□□□□ 0.77
NPHP3-201ENST00000337331 ELL2O00472 640 aaPredicted RBP19.87■□□□□ 0.77
NPHP3-201ENST00000337331 E9PSI1 815 aa19.87■□□□□ 0.77
NPHP3-201ENST00000337331 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.87■□□□□ 0.77
NPHP3-201ENST00000337331 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
NPHP3-201ENST00000337331 MYOM3Q5VTT5 1437 aa19.86■□□□□ 0.77
NPHP3-201ENST00000337331 STK31Q9BXU1 1019 aa19.86■□□□□ 0.77
NPHP3-201ENST00000337331 SLC4A10Q6U841 1118 aa19.86■□□□□ 0.77
NPHP3-201ENST00000337331 ZSCAN30Q86W11 494 aa19.85■□□□□ 0.77
NPHP3-201ENST00000337331 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms