RNA–Protein interactions for RNA: ENST00000336708.11

TRIM16-201, Transcript of tripartite motif containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM16, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-201ENST00000336708 RTEL1-TNFRSF6BF6WH68 1400 aa13.6□□□□□ -0.23
TRIM16-201ENST00000336708 PLA2R1Q13018 1463 aa13.6□□□□□ -0.23
TRIM16-201ENST00000336708 WDR7Q9Y4E6 1490 aa13.6□□□□□ -0.23
TRIM16-201ENST00000336708 TRPM1Q7Z4N2 1603 aa13.59□□□□□ -0.23
TRIM16-201ENST00000336708 KIF7Q2M1P5 1343 aa13.59□□□□□ -0.23
TRIM16-201ENST00000336708 ARID4BQ4LE39 1312 aaPredicted RBP13.59□□□□□ -0.23
TRIM16-201ENST00000336708 EFCAB2Q5VUJ9 269 aa13.59□□□□□ -0.23
TRIM16-201ENST00000336708 DEPDC5O75140 1603 aa13.58□□□□□ -0.23
TRIM16-201ENST00000336708 ZFYVE16Q7Z3T8 1539 aa13.58□□□□□ -0.24
TRIM16-201ENST00000336708 LAMC1P11047 1609 aa13.58□□□□□ -0.24
TRIM16-201ENST00000336708 USP47Q96K76 1375 aa13.58□□□□□ -0.24
TRIM16-201ENST00000336708 TRAPPC8Q9Y2L5 1435 aa13.58□□□□□ -0.24
TRIM16-201ENST00000336708 RIMBP3CA6NJZ7 1639 aa13.57□□□□□ -0.24
TRIM16-201ENST00000336708 RIMBP3BA6NNM3 1639 aa13.57□□□□□ -0.24
TRIM16-201ENST00000336708 RIMBP3Q9UFD9 1639 aa13.57□□□□□ -0.24
TRIM16-201ENST00000336708 INO80Q9ULG1 1556 aaPredicted RBP13.57□□□□□ -0.24
TRIM16-201ENST00000336708 CCDC144AA2RUR9 1427 aa13.54□□□□□ -0.24
TRIM16-201ENST00000336708 E9PCH4 1651 aa13.54□□□□□ -0.24
TRIM16-201ENST00000336708 PRAG1Q86YV5 1406 aa13.54□□□□□ -0.24
TRIM16-201ENST00000336708 PRKRIP1Q9H875 184 aaPredicted RBP13.53□□□□□ -0.24
TRIM16-201ENST00000336708 VWDEQ8N2E2 1590 aa13.53□□□□□ -0.24
TRIM16-201ENST00000336708 DHX29Q7Z478 1369 aaKnown RBP13.52□□□□□ -0.24
TRIM16-201ENST00000336708 EIF2AK4Q9P2K8 1649 aaKnown RBP13.52□□□□□ -0.24
TRIM16-201ENST00000336708 A2MP01023 1474 aa13.52□□□□□ -0.25
TRIM16-201ENST00000336708 GPRASP1Q5JY77 1395 aa13.51□□□□□ -0.25
TRIM16-201ENST00000336708 ATP7AQ04656 1500 aa13.51□□□□□ -0.25
TRIM16-201ENST00000336708 FANCAO15360 1455 aa13.5□□□□□ -0.25
TRIM16-201ENST00000336708 ROCK2O75116 1388 aaKnown RBP13.5□□□□□ -0.25
TRIM16-201ENST00000336708 RNF17Q9BXT8 1623 aaKnown RBP13.5□□□□□ -0.25
TRIM16-201ENST00000336708 TET3O43151 1660 aa13.5□□□□□ -0.25
TRIM16-201ENST00000336708 CEP152O94986 1710 aa13.5□□□□□ -0.25
TRIM16-201ENST00000336708 PRDM15P57071 1507 aaPredicted RBP13.5□□□□□ -0.25
TRIM16-201ENST00000336708 SPHKAPQ2M3C7 1700 aa13.49□□□□□ -0.25
TRIM16-201ENST00000336708 TRPM2O94759 1503 aa13.49□□□□□ -0.25
TRIM16-201ENST00000336708 ASXL2Q76L83 1435 aa13.49□□□□□ -0.25
TRIM16-201ENST00000336708 NEURL4Q96JN8 1562 aa13.48□□□□□ -0.25
TRIM16-201ENST00000336708 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
TRIM16-201ENST00000336708 SPAG9O60271 1321 aaKnown RBP13.47□□□□□ -0.25
TRIM16-201ENST00000336708 PTPRTO14522 1441 aa13.47□□□□□ -0.25
TRIM16-201ENST00000336708 CARD11Q9BXL7 1154 aa13.47□□□□□ -0.25
TRIM16-201ENST00000336708 MROH1Q8NDA8 1641 aa13.47□□□□□ -0.25
TRIM16-201ENST00000336708 ZNF326Q5BKZ1 582 aaKnown RBP13.46□□□□□ -0.25
TRIM16-201ENST00000336708 CFAP74Q9C0B2 1584 aa13.45□□□□□ -0.26
TRIM16-201ENST00000336708 ADGRL1O94910 1474 aa13.45□□□□□ -0.26
TRIM16-201ENST00000336708 KIDINS220Q9ULH0 1771 aa13.45□□□□□ -0.26
TRIM16-201ENST00000336708 CCDC184Q52MB2 194 aa13.45□□□□□ -0.26
TRIM16-201ENST00000336708 MADDQ8WXG6 1647 aa13.44□□□□□ -0.26
TRIM16-201ENST00000336708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRIM16-201ENST00000336708 AFAP1Q8N556 730 aa13.43□□□□□ -0.26
TRIM16-201ENST00000336708 CLTCL1P53675 1640 aa13.43□□□□□ -0.26
TRIM16-201ENST00000336708 KDM2AQ9Y2K7 1162 aa13.43□□□□□ -0.26
TRIM16-201ENST00000336708 SCAPERQ9BY12 1400 aa13.42□□□□□ -0.26
TRIM16-201ENST00000336708 IQGAP1P46940 1657 aa13.41□□□□□ -0.26
TRIM16-201ENST00000336708 ST20-MTHFSA0A0A6YYL1 179 aa13.41□□□□□ -0.26
TRIM16-201ENST00000336708 FKBP8Q14318 412 aa13.41□□□□□ -0.26
TRIM16-201ENST00000336708 LMTK2Q8IWU2 1503 aa13.4□□□□□ -0.26
TRIM16-201ENST00000336708 KTN1Q86UP2 1357 aaKnown RBP13.4□□□□□ -0.26
TRIM16-201ENST00000336708 KIAA1210Q9ULL0 1709 aa13.4□□□□□ -0.26
TRIM16-201ENST00000336708 COL17A1Q9UMD9 1497 aaPredicted RBP13.4□□□□□ -0.26
TRIM16-201ENST00000336708 HNRNPUQ00839 825 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRIM16-201ENST00000336708 RBM19Q9Y4C8 960 aaKnown RBP13.4□□□□□ -0.27
TRIM16-201ENST00000336708 ZNF518AQ6AHZ1 1483 aa13.39□□□□□ -0.27
TRIM16-201ENST00000336708 ERICH6Q7L0X2 663 aa13.38□□□□□ -0.27
TRIM16-201ENST00000336708 MRS2Q9HD23 443 aa13.38□□□□□ -0.27
TRIM16-201ENST00000336708 STAC3Q96MF2 364 aa13.38□□□□□ -0.27
TRIM16-201ENST00000336708 IFT172Q9UG01 1749 aa13.38□□□□□ -0.27
TRIM16-201ENST00000336708 EFCAB6Q5THR3 1501 aa13.37□□□□□ -0.27
TRIM16-201ENST00000336708 ZBED9Q6R2W3 1325 aa13.37□□□□□ -0.27
TRIM16-201ENST00000336708 NBPF1Q3BBV0 1214 aa13.36□□□□□ -0.27
TRIM16-201ENST00000336708 KANK1Q14678 1352 aa13.36□□□□□ -0.27
TRIM16-201ENST00000336708 MLH3Q9UHC1 1453 aa13.36□□□□□ -0.27
TRIM16-201ENST00000336708 RGL3Q3MIN7 710 aa13.36□□□□□ -0.27
TRIM16-201ENST00000336708 CYB5RLQ6IPT4 315 aa13.36□□□□□ -0.27
TRIM16-201ENST00000336708 PPRC1Q5VV67 1664 aaKnown RBP13.36□□□□□ -0.27
TRIM16-201ENST00000336708 TESK2Q96S53 571 aa13.35□□□□□ -0.27
TRIM16-201ENST00000336708 POGZQ7Z3K3 1410 aa13.35□□□□□ -0.27
TRIM16-201ENST00000336708 FRMPD1Q5SYB0 1578 aa13.35□□□□□ -0.27
TRIM16-201ENST00000336708 HECW2Q9P2P5 1572 aa13.35□□□□□ -0.27
TRIM16-201ENST00000336708 KIF1BO60333 1816 aa13.34□□□□□ -0.27
TRIM16-201ENST00000336708 CD109Q6YHK3 1445 aa13.33□□□□□ -0.28
TRIM16-201ENST00000336708 MYOM2P54296 1465 aa13.33□□□□□ -0.28
TRIM16-201ENST00000336708 ANO8Q9HCE9 1232 aaPredicted RBP13.32□□□□□ -0.28
TRIM16-201ENST00000336708 MAP3K4Q9Y6R4 1608 aa13.32□□□□□ -0.28
TRIM16-201ENST00000336708 NEFLP07196 543 aa13.32□□□□□ -0.28
TRIM16-201ENST00000336708 FAM9BQ8IZU0 186 aa13.32□□□□□ -0.28
TRIM16-201ENST00000336708 NEO1Q92859 1461 aa13.32□□□□□ -0.28
TRIM16-201ENST00000336708 RALBP1Q15311 655 aa13.31□□□□□ -0.28
TRIM16-201ENST00000336708 MROH2AA6NES4 1674 aa13.31□□□□□ -0.28
TRIM16-201ENST00000336708 ABCA6Q8N139 1617 aa13.31□□□□□ -0.28
TRIM16-201ENST00000336708 BRD4O60885 1362 aaPredicted RBP13.31□□□□□ -0.28
TRIM16-201ENST00000336708 PARD3Q8TEW0 1356 aa13.31□□□□□ -0.28
TRIM16-201ENST00000336708 DISP3Q9P2K9 1392 aa13.31□□□□□ -0.28
TRIM16-201ENST00000336708 LRPPRCP42704 1394 aaKnown RBP13.31□□□□□ -0.28
TRIM16-201ENST00000336708 NPM1P06748 294 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRIM16-201ENST00000336708 NRXN1Q9ULB1 1477 aa13.3□□□□□ -0.28
TRIM16-201ENST00000336708 WASHC2CQ9Y4E1 1318 aa13.3□□□□□ -0.28
TRIM16-201ENST00000336708 KIF3BO15066 747 aa13.29□□□□□ -0.28
TRIM16-201ENST00000336708 PER1O15534 1290 aaPredicted RBP13.29□□□□□ -0.28
TRIM16-201ENST00000336708 MYBBP1AQ9BQG0 1328 aaKnown RBP13.29□□□□□ -0.28
TRIM16-201ENST00000336708 PNISRQ8TF01 805 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms