RNA–Protein interactions for RNA: ENST00000326427.10

ITM2C-202, Transcript of integral membrane protein 2C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2C, Length 2,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-202ENST00000326427 SYCP2Q9BX26 1530 aa29.92■■■□□ 2.38
ITM2C-202ENST00000326427 KTN1Q86UP2 1357 aaKnown RBP29.92■■■□□ 2.38
ITM2C-202ENST00000326427 FANCIQ9NVI1 1328 aa29.91■■■□□ 2.38
ITM2C-202ENST00000326427 PLXNC1O60486 1568 aa29.9■■■□□ 2.38
ITM2C-202ENST00000326427 DCAF11Q8TEB1 546 aa29.89■■■□□ 2.38
ITM2C-202ENST00000326427 ST20-MTHFSA0A0A6YYL1 179 aa29.88■■■□□ 2.37
ITM2C-202ENST00000326427 PNISRQ8TF01 805 aaKnown RBP29.88■■■□□ 2.37
ITM2C-202ENST00000326427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.88■■■□□ 2.37
ITM2C-202ENST00000326427 PRAG1Q86YV5 1406 aa29.87■■■□□ 2.37
ITM2C-202ENST00000326427 NUDCQ9Y266 331 aa29.87■■■□□ 2.37
ITM2C-202ENST00000326427 KDM2AQ9Y2K7 1162 aa29.87■■■□□ 2.37
ITM2C-202ENST00000326427 IQGAP3Q86VI3 1631 aa29.86■■■□□ 2.37
ITM2C-202ENST00000326427 MYO5CQ9NQX4 1742 aa29.86■■■□□ 2.37
ITM2C-202ENST00000326427 RNF123Q5XPI4 1314 aa29.86■■■□□ 2.37
ITM2C-202ENST00000326427 LAMC1P11047 1609 aa29.86■■■□□ 2.37
ITM2C-202ENST00000326427 ARHGAP5Q13017 1502 aa29.85■■■□□ 2.37
ITM2C-202ENST00000326427 CCDC144AA2RUR9 1427 aa29.85■■■□□ 2.37
ITM2C-202ENST00000326427 LRPPRCP42704 1394 aaKnown RBP29.84■■■□□ 2.37
ITM2C-202ENST00000326427 BRD4O60885 1362 aaPredicted RBP29.83■■■□□ 2.37
ITM2C-202ENST00000326427 PLA2R1Q13018 1463 aa29.81■■■□□ 2.36
ITM2C-202ENST00000326427 PLEKHH2Q8IVE3 1493 aa29.81■■■□□ 2.36
ITM2C-202ENST00000326427 RALBP1Q15311 655 aa29.8■■■□□ 2.36
ITM2C-202ENST00000326427 TMC1Q8TDI8 760 aa29.8■■■□□ 2.36
ITM2C-202ENST00000326427 GPRASP1Q5JY77 1395 aa29.8■■■□□ 2.36
ITM2C-202ENST00000326427 ABCC2Q92887 1545 aa29.8■■■□□ 2.36
ITM2C-202ENST00000326427 B4GALNT3Q6L9W6 998 aa29.8■■■□□ 2.36
ITM2C-202ENST00000326427 MYBBP1AQ9BQG0 1328 aaKnown RBP29.79■■■□□ 2.36
ITM2C-202ENST00000326427 MSH5O43196 834 aa29.78■■■□□ 2.36
ITM2C-202ENST00000326427 CNGB1Q14028 1251 aaPredicted RBP29.78■■■□□ 2.36
ITM2C-202ENST00000326427 A2MP01023 1474 aa29.77■■■□□ 2.36
ITM2C-202ENST00000326427 MAGI2Q86UL8 1455 aa29.77■■■□□ 2.36
ITM2C-202ENST00000326427 PRDM15P57071 1507 aaPredicted RBP29.75■■■□□ 2.35
ITM2C-202ENST00000326427 DUOX2Q9NRD8 1548 aa29.74■■■□□ 2.35
ITM2C-202ENST00000326427 EIF2AK4Q9P2K8 1649 aaKnown RBP29.74■■■□□ 2.35
ITM2C-202ENST00000326427 ATP10AO60312 1499 aa29.74■■■□□ 2.35
ITM2C-202ENST00000326427 PARD3Q8TEW0 1356 aa29.7■■■□□ 2.34
ITM2C-202ENST00000326427 COL17A1Q9UMD9 1497 aaPredicted RBP29.7■■■□□ 2.34
ITM2C-202ENST00000326427 ERBINQ96RT1 1412 aa29.69■■■□□ 2.34
ITM2C-202ENST00000326427 ERCC6L2Q5T890 1561 aa29.68■■■□□ 2.34
ITM2C-202ENST00000326427 RNF17Q9BXT8 1623 aaKnown RBP29.64■■■□□ 2.34
ITM2C-202ENST00000326427 NBPF1Q3BBV0 1214 aa29.63■■■□□ 2.33
ITM2C-202ENST00000326427 NLRP13Q86W25 1043 aa29.62■■■□□ 2.33
ITM2C-202ENST00000326427 PLCH2O75038 1416 aa29.62■■■□□ 2.33
ITM2C-202ENST00000326427 ZCCHC11Q5TAX3 1644 aaKnown RBP29.61■■■□□ 2.33
ITM2C-202ENST00000326427 PER1O15534 1290 aaPredicted RBP29.6■■■□□ 2.33
ITM2C-202ENST00000326427 RGL3Q3MIN7 710 aa29.6■■■□□ 2.33
ITM2C-202ENST00000326427 ABCC1P33527 1531 aa29.6■■■□□ 2.33
ITM2C-202ENST00000326427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.6■■■□□ 2.33
ITM2C-202ENST00000326427 WASHC2CQ9Y4E1 1318 aa29.59■■■□□ 2.33
ITM2C-202ENST00000326427 TESK2Q96S53 571 aa29.58■■■□□ 2.33
ITM2C-202ENST00000326427 UHRF1BP1LA0JNW5 1464 aa29.56■■■□□ 2.32
ITM2C-202ENST00000326427 ZMYM4Q5VZL5 1548 aa29.56■■■□□ 2.32
ITM2C-202ENST00000326427 DISP3Q9P2K9 1392 aa29.56■■■□□ 2.32
ITM2C-202ENST00000326427 INSRP06213 1382 aa29.55■■■□□ 2.32
ITM2C-202ENST00000326427 CCDC136Q96JN2 1154 aa29.52■■■□□ 2.32
ITM2C-202ENST00000326427 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
ITM2C-202ENST00000326427 SENP3-EIF4A1A0A087X0R7 540 aa29.49■■■□□ 2.31
ITM2C-202ENST00000326427 PDE3BQ13370 1112 aa29.49■■■□□ 2.31
ITM2C-202ENST00000326427 EFCAB2Q5VUJ9 269 aa29.49■■■□□ 2.31
ITM2C-202ENST00000326427 MADDQ8WXG6 1647 aa29.49■■■□□ 2.31
ITM2C-202ENST00000326427 ARAP3Q8WWN8 1544 aa29.48■■■□□ 2.31
ITM2C-202ENST00000326427 IQGAP1P46940 1657 aa29.48■■■□□ 2.31
ITM2C-202ENST00000326427 TRAPPC8Q9Y2L5 1435 aa29.47■■■□□ 2.31
ITM2C-202ENST00000326427 CEP152O94986 1710 aa29.46■■■□□ 2.31
ITM2C-202ENST00000326427 BLMP54132 1417 aaPredicted RBP29.46■■■□□ 2.31
ITM2C-202ENST00000326427 SPHKAPQ2M3C7 1700 aa29.45■■■□□ 2.31
ITM2C-202ENST00000326427 TMF1P82094 1093 aa29.45■■■□□ 2.31
ITM2C-202ENST00000326427 TRPM2O94759 1503 aa29.45■■■□□ 2.3
ITM2C-202ENST00000326427 RRP1P56182 461 aaKnown RBP29.44■■■□□ 2.3
ITM2C-202ENST00000326427 RTEL1-TNFRSF6BF6WH68 1400 aa29.44■■■□□ 2.3
ITM2C-202ENST00000326427 ERICH6Q7L0X2 663 aa29.44■■■□□ 2.3
ITM2C-202ENST00000326427 DEPDC5O75140 1603 aa29.44■■■□□ 2.3
ITM2C-202ENST00000326427 ZFYVE16Q7Z3T8 1539 aa29.42■■■□□ 2.3
ITM2C-202ENST00000326427 PANK3Q9H999 370 aa29.41■■■□□ 2.3
ITM2C-202ENST00000326427 RCAN3Q9UKA8 241 aa29.4■■■□□ 2.3
ITM2C-202ENST00000326427 PTPRTO14522 1441 aa29.37■■■□□ 2.29
ITM2C-202ENST00000326427 TET3O43151 1660 aa29.36■■■□□ 2.29
ITM2C-202ENST00000326427 WDR7Q9Y4E6 1490 aa29.36■■■□□ 2.29
ITM2C-202ENST00000326427 CC2D1BQ5T0F9 858 aaKnown RBP29.36■■■□□ 2.29
ITM2C-202ENST00000326427 CLTCL1P53675 1640 aa29.35■■■□□ 2.29
ITM2C-202ENST00000326427 SCAPERQ9BY12 1400 aa29.34■■■□□ 2.29
ITM2C-202ENST00000326427 STAC3Q96MF2 364 aa29.33■■■□□ 2.29
ITM2C-202ENST00000326427 SYNMO15061 1565 aa29.33■■■□□ 2.29
ITM2C-202ENST00000326427 SPAG9O60271 1321 aaKnown RBP29.33■■■□□ 2.29
ITM2C-202ENST00000326427 VWDEQ8N2E2 1590 aa29.31■■■□□ 2.28
ITM2C-202ENST00000326427 INO80Q9ULG1 1556 aaPredicted RBP29.31■■■□□ 2.28
ITM2C-202ENST00000326427 NEURL4Q96JN8 1562 aa29.3■■■□□ 2.28
ITM2C-202ENST00000326427 KIAA1210Q9ULL0 1709 aa29.3■■■□□ 2.28
ITM2C-202ENST00000326427 ABCA9Q8IUA7 1624 aa29.29■■■□□ 2.28
ITM2C-202ENST00000326427 SCAF11Q99590 1463 aaKnown RBP29.29■■■□□ 2.28
ITM2C-202ENST00000326427 EXOC6Q8TAG9 804 aa29.28■■■□□ 2.28
ITM2C-202ENST00000326427 SALL2Q9Y467 1007 aaPredicted RBP29.28■■■□□ 2.28
ITM2C-202ENST00000326427 ATP7AQ04656 1500 aa29.26■■■□□ 2.27
ITM2C-202ENST00000326427 MYOM1P52179 1685 aa29.25■■■□□ 2.27
ITM2C-202ENST00000326427 CDCA7LQ96GN5 454 aa29.25■■■□□ 2.27
ITM2C-202ENST00000326427 AFAP1Q8N556 730 aa29.23■■■□□ 2.27
ITM2C-202ENST00000326427 NOP58Q9Y2X3 529 aaKnown RBP29.23■■■□□ 2.27
ITM2C-202ENST00000326427 CDCA8Q53HL2 280 aa29.21■■■□□ 2.27
ITM2C-202ENST00000326427 ASXL1Q8IXJ9 1541 aa29.18■■■□□ 2.26
ITM2C-202ENST00000326427 AMER1Q5JTC6 1135 aaPredicted RBP29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms