RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 TEX14Q8IWB6 1497 aa14.35□□□□□ -0.11
ABCF1-201ENST00000326195 KIAA1107Q9UPP5 1409 aa14.35□□□□□ -0.11
ABCF1-201ENST00000326195 HFM1A2PYH4 1435 aa14.34□□□□□ -0.11
ABCF1-201ENST00000326195 POGZQ7Z3K3 1410 aa14.34□□□□□ -0.11
ABCF1-201ENST00000326195 ZNF518AQ6AHZ1 1483 aa14.34□□□□□ -0.11
ABCF1-201ENST00000326195 CNGB1Q14028 1251 aaPredicted RBP14.33□□□□□ -0.12
ABCF1-201ENST00000326195 ABCC1P33527 1531 aa14.33□□□□□ -0.12
ABCF1-201ENST00000326195 POLR3GLQ9BT43 218 aa14.32□□□□□ -0.12
ABCF1-201ENST00000326195 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.31□□□□□ -0.12
ABCF1-201ENST00000326195 FANCIQ9NVI1 1328 aa14.31□□□□□ -0.12
ABCF1-201ENST00000326195 SALL2Q9Y467 1007 aaPredicted RBP14.31□□□□□ -0.12
ABCF1-201ENST00000326195 CFAP65Q6ZU64 1925 aaKnown RBP14.31□□□□□ -0.12
ABCF1-201ENST00000326195 DHX29Q7Z478 1369 aaKnown RBP14.3□□□□□ -0.12
ABCF1-201ENST00000326195 NEO1Q92859 1461 aa14.29□□□□□ -0.12
ABCF1-201ENST00000326195 KANK1Q14678 1352 aa14.29□□□□□ -0.12
ABCF1-201ENST00000326195 NEFLP07196 543 aa14.29□□□□□ -0.12
ABCF1-201ENST00000326195 DNMT1P26358 1616 aaKnown RBP14.29□□□□□ -0.12
ABCF1-201ENST00000326195 DCAF11Q8TEB1 546 aa14.28□□□□□ -0.12
ABCF1-201ENST00000326195 KIF13AQ9H1H9 1805 aa14.28□□□□□ -0.12
ABCF1-201ENST00000326195 A2MP01023 1474 aa14.28□□□□□ -0.12
ABCF1-201ENST00000326195 ATP7AQ04656 1500 aa14.27□□□□□ -0.12
ABCF1-201ENST00000326195 ROCK1Q13464 1354 aa14.26□□□□□ -0.13
ABCF1-201ENST00000326195 TONSLQ96HA7 1378 aa14.26□□□□□ -0.13
ABCF1-201ENST00000326195 CCDC136Q96JN2 1154 aa14.26□□□□□ -0.13
ABCF1-201ENST00000326195 IRX6P78412 446 aaPredicted RBP14.25□□□□□ -0.13
ABCF1-201ENST00000326195 DDX10Q13206 875 aaKnown RBP14.25□□□□□ -0.13
ABCF1-201ENST00000326195 L3MBTL2Q969R5 705 aa14.25□□□□□ -0.13
ABCF1-201ENST00000326195 MAP3K4Q9Y6R4 1608 aa14.24□□□□□ -0.13
ABCF1-201ENST00000326195 GLI2P10070 1586 aa14.21□□□□□ -0.13
ABCF1-201ENST00000326195 ZFYVE16Q7Z3T8 1539 aa14.2□□□□□ -0.14
ABCF1-201ENST00000326195 ATP10AO60312 1499 aa14.2□□□□□ -0.14
ABCF1-201ENST00000326195 PPP1R15AO75807 674 aaPredicted RBP14.2□□□□□ -0.14
ABCF1-201ENST00000326195 NBR1Q14596 966 aa14.2□□□□□ -0.14
ABCF1-201ENST00000326195 IDI1Q13907 227 aa14.19□□□□□ -0.14
ABCF1-201ENST00000326195 SAFB2Q14151 953 aaKnown RBP eCLIP14.18□□□□□ -0.14
ABCF1-201ENST00000326195 ARHGEF5Q12774 1597 aa14.17□□□□□ -0.14
ABCF1-201ENST00000326195 HSPA2P54652 639 aa14.17□□□□□ -0.14
ABCF1-201ENST00000326195 MLH3Q9UHC1 1453 aa14.17□□□□□ -0.14
ABCF1-201ENST00000326195 RTEL1-TNFRSF6BF6WH68 1400 aa14.17□□□□□ -0.14
ABCF1-201ENST00000326195 PPRC1Q5VV67 1664 aaKnown RBP14.17□□□□□ -0.14
ABCF1-201ENST00000326195 DUOX2Q9NRD8 1548 aa14.16□□□□□ -0.14
ABCF1-201ENST00000326195 ANP32CO43423 234 aa14.16□□□□□ -0.14
ABCF1-201ENST00000326195 STK26Q9P289 416 aa14.16□□□□□ -0.14
ABCF1-201ENST00000326195 ARAP3Q8WWN8 1544 aa14.15□□□□□ -0.14
ABCF1-201ENST00000326195 KIDINS220Q9ULH0 1771 aa14.15□□□□□ -0.14
ABCF1-201ENST00000326195 SHANK2Q9UPX8 1470 aa14.15□□□□□ -0.14
ABCF1-201ENST00000326195 ADGRL2O95490 1459 aa14.15□□□□□ -0.14
ABCF1-201ENST00000326195 HECW2Q9P2P5 1572 aa14.15□□□□□ -0.14
ABCF1-201ENST00000326195 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
ABCF1-201ENST00000326195 IL27Q8NEV9 243 aa14.14□□□□□ -0.15
ABCF1-201ENST00000326195 CCDC144AA2RUR9 1427 aa14.14□□□□□ -0.15
ABCF1-201ENST00000326195 PZPP20742 1482 aa14.14□□□□□ -0.15
ABCF1-201ENST00000326195 ZMYM3Q14202 1370 aa14.13□□□□□ -0.15
ABCF1-201ENST00000326195 ABCA6Q8N139 1617 aa14.13□□□□□ -0.15
ABCF1-201ENST00000326195 TMEM132EQ6IEE7 984 aa14.12□□□□□ -0.15
ABCF1-201ENST00000326195 RBM33Q96EV2 1170 aaKnown RBP14.12□□□□□ -0.15
ABCF1-201ENST00000326195 RTN4Q9NQC3 1192 aaKnown RBP14.12□□□□□ -0.15
ABCF1-201ENST00000326195 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.11□□□□□ -0.15
ABCF1-201ENST00000326195 FAM135AQ9P2D6 1515 aa14.11□□□□□ -0.15
ABCF1-201ENST00000326195 ERBINQ96RT1 1412 aa14.11□□□□□ -0.15
ABCF1-201ENST00000326195 CFAP74Q9C0B2 1584 aa14.11□□□□□ -0.15
ABCF1-201ENST00000326195 NBPF8Q3BBV2 869 aa14.1□□□□□ -0.15
ABCF1-201ENST00000326195 FRMPD1Q5SYB0 1578 aa14.1□□□□□ -0.15
ABCF1-201ENST00000326195 ANKRD30BQ9BXX2 1392 aa14.1□□□□□ -0.15
ABCF1-201ENST00000326195 DIP2CQ9Y2E4 1556 aa14.1□□□□□ -0.15
ABCF1-201ENST00000326195 SLC26A8Q96RN1 970 aa14.1□□□□□ -0.15
ABCF1-201ENST00000326195 UGGT1Q9NYU2 1555 aa14.09□□□□□ -0.15
ABCF1-201ENST00000326195 NBPF1Q3BBV0 1214 aa14.09□□□□□ -0.15
ABCF1-201ENST00000326195 RICTORQ6R327 1708 aa14.08□□□□□ -0.16
ABCF1-201ENST00000326195 CFAP70Q5T0N1 1121 aa14.07□□□□□ -0.16
ABCF1-201ENST00000326195 PLEKHG5O94827 1062 aa14.07□□□□□ -0.16
ABCF1-201ENST00000326195 NPATQ14207 1427 aa14.07□□□□□ -0.16
ABCF1-201ENST00000326195 KDM5CP41229 1560 aa14.06□□□□□ -0.16
ABCF1-201ENST00000326195 CROCC2H7BZ55 1655 aa14.06□□□□□ -0.16
ABCF1-201ENST00000326195 INO80Q9ULG1 1556 aaPredicted RBP14.06□□□□□ -0.16
ABCF1-201ENST00000326195 ADGBQ8N7X0 1667 aa14.05□□□□□ -0.16
ABCF1-201ENST00000326195 KDM4FA0A1W2PPD8 638 aa14.05□□□□□ -0.16
ABCF1-201ENST00000326195 NUTM2FA1L443 756 aa14.05□□□□□ -0.16
ABCF1-201ENST00000326195 CARD11Q9BXL7 1154 aa14.05□□□□□ -0.16
ABCF1-201ENST00000326195 TXNDC2Q86VQ3 553 aa14.05□□□□□ -0.16
ABCF1-201ENST00000326195 ADGRF5Q8IZF2 1346 aa14.04□□□□□ -0.16
ABCF1-201ENST00000326195 AEBP2Q6ZN18 517 aaPredicted RBP14.04□□□□□ -0.16
ABCF1-201ENST00000326195 TRAK1Q9UPV9 953 aa14.04□□□□□ -0.16
ABCF1-201ENST00000326195 NOP58Q9Y2X3 529 aaKnown RBP14.03□□□□□ -0.16
ABCF1-201ENST00000326195 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
ABCF1-201ENST00000326195 MAGI2Q86UL8 1455 aa14.02□□□□□ -0.16
ABCF1-201ENST00000326195 GCC2Q8IWJ2 1684 aa14.01□□□□□ -0.17
ABCF1-201ENST00000326195 PLA2R1Q13018 1463 aa14.01□□□□□ -0.17
ABCF1-201ENST00000326195 CCER2I3L3R5 266 aa14.01□□□□□ -0.17
ABCF1-201ENST00000326195 ERICH6BQ5W0A0 696 aa14.01□□□□□ -0.17
ABCF1-201ENST00000326195 B4GALNT3Q6L9W6 998 aa14□□□□□ -0.17
ABCF1-201ENST00000326195 PLXNC1O60486 1568 aa14□□□□□ -0.17
ABCF1-201ENST00000326195 MAST1Q9Y2H9 1570 aa14□□□□□ -0.17
ABCF1-201ENST00000326195 PRDM15P57071 1507 aaPredicted RBP13.99□□□□□ -0.17
ABCF1-201ENST00000326195 TNRQ92752 1358 aa13.99□□□□□ -0.17
ABCF1-201ENST00000326195 UBE2Q2Q8WVN8 375 aa13.98□□□□□ -0.17
ABCF1-201ENST00000326195 SLC52A1Q9NWF4 448 aa13.98□□□□□ -0.17
ABCF1-201ENST00000326195 SIGLEC1Q9BZZ2 1709 aa13.98□□□□□ -0.17
ABCF1-201ENST00000326195 HNRNPUQ00839 825 aaKnown RBP eCLIP13.98□□□□□ -0.17
ABCF1-201ENST00000326195 NCKAP5LQ9HCH0 1330 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms