RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 KIF7Q2M1P5 1343 aa12.32□□□□□ -0.44
TMEM39A-201ENST00000319172 WASHC2AQ641Q2 1341 aa12.32□□□□□ -0.44
TMEM39A-201ENST00000319172 SOX12O15370 315 aa12.32□□□□□ -0.44
TMEM39A-201ENST00000319172 PANK3Q9H999 370 aa12.32□□□□□ -0.44
TMEM39A-201ENST00000319172 WDR97A6NE52 1622 aa12.32□□□□□ -0.44
TMEM39A-201ENST00000319172 PRKRIP1Q9H875 184 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-201ENST00000319172 U2SURPO15042 1029 aaKnown RBP12.31□□□□□ -0.44
TMEM39A-201ENST00000319172 CD109Q6YHK3 1445 aa12.3□□□□□ -0.44
TMEM39A-201ENST00000319172 VGFO15240 615 aaPredicted RBP12.3□□□□□ -0.44
TMEM39A-201ENST00000319172 EIF3AQ14152 1382 aaKnown RBP12.3□□□□□ -0.44
TMEM39A-201ENST00000319172 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
TMEM39A-201ENST00000319172 CCDC7Q96M83 1385 aa12.29□□□□□ -0.44
TMEM39A-201ENST00000319172 ANKRD30BQ9BXX2 1392 aa12.29□□□□□ -0.44
TMEM39A-201ENST00000319172 TMEM132EQ6IEE7 984 aa12.29□□□□□ -0.44
TMEM39A-201ENST00000319172 NUTM2FA1L443 756 aa12.29□□□□□ -0.44
TMEM39A-201ENST00000319172 CEP170Q5SW79 1584 aa12.29□□□□□ -0.44
TMEM39A-201ENST00000319172 LMOD2Q6P5Q4 547 aa12.29□□□□□ -0.44
TMEM39A-201ENST00000319172 RALBP1Q15311 655 aa12.28□□□□□ -0.44
TMEM39A-201ENST00000319172 ZBTB47Q9UFB7 747 aaPredicted RBP12.28□□□□□ -0.44
TMEM39A-201ENST00000319172 SAMD9Q5K651 1589 aa12.27□□□□□ -0.45
TMEM39A-201ENST00000319172 CFAP43Q8NDM7 1665 aa12.27□□□□□ -0.45
TMEM39A-201ENST00000319172 ADGRL1O94910 1474 aa12.26□□□□□ -0.45
TMEM39A-201ENST00000319172 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.26□□□□□ -0.45
TMEM39A-201ENST00000319172 NUDCQ9Y266 331 aa12.25□□□□□ -0.45
TMEM39A-201ENST00000319172 MINK1Q8N4C8 1332 aaPredicted RBP12.25□□□□□ -0.45
TMEM39A-201ENST00000319172 NLRP13Q86W25 1043 aa12.25□□□□□ -0.45
TMEM39A-201ENST00000319172 FANCAO15360 1455 aa12.24□□□□□ -0.45
TMEM39A-201ENST00000319172 A0A0G2JS52 829 aa12.24□□□□□ -0.45
TMEM39A-201ENST00000319172 HDGFL2Q7Z4V5 671 aaPredicted RBP12.24□□□□□ -0.45
TMEM39A-201ENST00000319172 EID1Q9Y6B2 187 aa12.24□□□□□ -0.45
TMEM39A-201ENST00000319172 MAPK8IP3Q9UPT6 1336 aa12.23□□□□□ -0.45
TMEM39A-201ENST00000319172 ASXL2Q76L83 1435 aa12.23□□□□□ -0.45
TMEM39A-201ENST00000319172 MAGI3Q5TCQ9 1506 aa12.23□□□□□ -0.45
TMEM39A-201ENST00000319172 NPM2Q86SE8 214 aaKnown RBP12.23□□□□□ -0.45
TMEM39A-201ENST00000319172 MAPKBP1O60336 1514 aa12.22□□□□□ -0.45
TMEM39A-201ENST00000319172 LAS1LQ9Y4W2 734 aaKnown RBP12.22□□□□□ -0.45
TMEM39A-201ENST00000319172 PLCH2O75038 1416 aa12.21□□□□□ -0.45
TMEM39A-201ENST00000319172 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.21□□□□□ -0.46
TMEM39A-201ENST00000319172 CENPJQ9HC77 1338 aaPredicted RBP12.2□□□□□ -0.46
TMEM39A-201ENST00000319172 U2AF1L5P0DN76 240 aaPredicted RBP12.2□□□□□ -0.46
TMEM39A-201ENST00000319172 U2AF1Q01081 240 aaKnown RBP eCLIP12.2□□□□□ -0.463e-12■■■■□ 20.9
TMEM39A-201ENST00000319172 C11orf95C9JLR9 678 aaPredicted RBP12.2□□□□□ -0.46
TMEM39A-201ENST00000319172 CCDC146Q8IYE0 955 aa12.2□□□□□ -0.46
TMEM39A-201ENST00000319172 MYBBP1AQ9BQG0 1328 aaKnown RBP12.2□□□□□ -0.46
TMEM39A-201ENST00000319172 TCOF1Q13428 1488 aaKnown RBP12.2□□□□□ -0.46
TMEM39A-201ENST00000319172 SYCP2Q9BX26 1530 aa12.19□□□□□ -0.46
TMEM39A-201ENST00000319172 TERF2IPQ9NYB0 399 aa12.19□□□□□ -0.46
TMEM39A-201ENST00000319172 TRAPPC8Q9Y2L5 1435 aa12.19□□□□□ -0.46
TMEM39A-201ENST00000319172 B4GALNT3Q6L9W6 998 aa12.18□□□□□ -0.46
TMEM39A-201ENST00000319172 STAC3Q96MF2 364 aa12.18□□□□□ -0.46
TMEM39A-201ENST00000319172 CNTLNQ9NXG0 1405 aa12.18□□□□□ -0.46
TMEM39A-201ENST00000319172 EVC2Q86UK5 1308 aa12.18□□□□□ -0.46
TMEM39A-201ENST00000319172 FRAT1Q92837 279 aaPredicted RBP12.17□□□□□ -0.46
TMEM39A-201ENST00000319172 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
TMEM39A-201ENST00000319172 PRKCSHP14314 528 aaPredicted RBP12.16□□□□□ -0.46
TMEM39A-201ENST00000319172 ABCC2Q92887 1545 aa12.16□□□□□ -0.46
TMEM39A-201ENST00000319172 WDR7Q9Y4E6 1490 aa12.16□□□□□ -0.46
TMEM39A-201ENST00000319172 RPRD2Q5VT52 1461 aaKnown RBP12.16□□□□□ -0.46
TMEM39A-201ENST00000319172 CABP2Q9NPB3 220 aa12.15□□□□□ -0.46
TMEM39A-201ENST00000319172 ERBINQ96RT1 1412 aa12.15□□□□□ -0.46
TMEM39A-201ENST00000319172 HAP1P54257 671 aaPredicted RBP12.15□□□□□ -0.46
TMEM39A-201ENST00000319172 FBXO31Q5XUX0 539 aaPredicted RBP12.14□□□□□ -0.47
TMEM39A-201ENST00000319172 CCDC184Q52MB2 194 aa12.13□□□□□ -0.47
TMEM39A-201ENST00000319172 SLC52A1Q9NWF4 448 aa12.13□□□□□ -0.47
TMEM39A-201ENST00000319172 PPP4R2Q9NY27 417 aa12.13□□□□□ -0.47
TMEM39A-201ENST00000319172 ITSN2Q9NZM3 1697 aa12.13□□□□□ -0.47
TMEM39A-201ENST00000319172 NGDNQ8NEJ9 315 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-201ENST00000319172 DHX29Q7Z478 1369 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-201ENST00000319172 DENND4BO75064 1496 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-201ENST00000319172 ANP32AP39687 249 aaKnown RBP12.12□□□□□ -0.47
TMEM39A-201ENST00000319172 RRP7AQ9Y3A4 280 aaKnown RBP12.12□□□□□ -0.47
TMEM39A-201ENST00000319172 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
TMEM39A-201ENST00000319172 RCAN3Q9UKA8 241 aa12.11□□□□□ -0.47
TMEM39A-201ENST00000319172 ADGRF5Q8IZF2 1346 aa12.1□□□□□ -0.47
TMEM39A-201ENST00000319172 IDI1Q13907 227 aa12.1□□□□□ -0.47
TMEM39A-201ENST00000319172 SLC12A5Q9H2X9 1139 aa12.1□□□□□ -0.47
TMEM39A-201ENST00000319172 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.1□□□□□ -0.47
TMEM39A-201ENST00000319172 PRAM1Q96QH2 718 aa12.1□□□□□ -0.47
TMEM39A-201ENST00000319172 FTSJ3Q8IY81 847 aaKnown RBP12.09□□□□□ -0.47
TMEM39A-201ENST00000319172 TXNDC2Q86VQ3 553 aa12.09□□□□□ -0.47
TMEM39A-201ENST00000319172 GGNBP2Q9H3C7 697 aa12.08□□□□□ -0.48
TMEM39A-201ENST00000319172 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
TMEM39A-201ENST00000319172 GOLGA2Q08379 1002 aa12.07□□□□□ -0.48
TMEM39A-201ENST00000319172 DNMT1P26358 1616 aaKnown RBP12.07□□□□□ -0.48
TMEM39A-201ENST00000319172 APAF1O14727 1248 aa12.07□□□□□ -0.48
TMEM39A-201ENST00000319172 SLC26A8Q96RN1 970 aa12.07□□□□□ -0.48
TMEM39A-201ENST00000319172 ERCC6L2Q5T890 1561 aa12.06□□□□□ -0.48
TMEM39A-201ENST00000319172 KDM5BQ9UGL1 1544 aa12.06□□□□□ -0.48
TMEM39A-201ENST00000319172 ABCA8O94911 1581 aa12.06□□□□□ -0.48
TMEM39A-201ENST00000319172 CEBPAP49715 358 aaPredicted RBP12.06□□□□□ -0.48
TMEM39A-201ENST00000319172 ZBED9Q6R2W3 1325 aa12.06□□□□□ -0.48
TMEM39A-201ENST00000319172 RTL5Q5HYW3 569 aaPredicted RBP12.06□□□□□ -0.48
TMEM39A-201ENST00000319172 CHD1O14646 1710 aa12.06□□□□□ -0.48
TMEM39A-201ENST00000319172 LTV1Q96GA3 475 aaPredicted RBP12.04□□□□□ -0.48
TMEM39A-201ENST00000319172 PZPP20742 1482 aa12.04□□□□□ -0.48
TMEM39A-201ENST00000319172 DUOX2Q9NRD8 1548 aa12.04□□□□□ -0.48
TMEM39A-201ENST00000319172 FAM135AQ9P2D6 1515 aa12.04□□□□□ -0.48
TMEM39A-201ENST00000319172 A2MP01023 1474 aa12.03□□□□□ -0.48
TMEM39A-201ENST00000319172 ABCC10Q5T3U5 1492 aa12.03□□□□□ -0.48
TMEM39A-201ENST00000319172 RPGRIP1LQ68CZ1 1315 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms