RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 LAS1LQ9Y4W2 734 aaKnown RBP21.65■■□□□ 1.06
CRAT-201ENST00000318080 IPO9Q96P70 1041 aaKnown RBP21.65■■□□□ 1.06
CRAT-201ENST00000318080 ZBTB47Q9UFB7 747 aaPredicted RBP21.65■■□□□ 1.06
CRAT-201ENST00000318080 DNMT1P26358 1616 aaKnown RBP21.64■■□□□ 1.06
CRAT-201ENST00000318080 ANP32AP39687 249 aaKnown RBP21.63■■□□□ 1.05
CRAT-201ENST00000318080 MYO5CQ9NQX4 1742 aa21.63■■□□□ 1.05
CRAT-201ENST00000318080 SMG6Q86US8 1419 aaKnown RBP21.62■■□□□ 1.05
CRAT-201ENST00000318080 NUDCQ9Y266 331 aa21.62■■□□□ 1.05
CRAT-201ENST00000318080 ROCK1Q13464 1354 aa21.61■■□□□ 1.05
CRAT-201ENST00000318080 PLCH2O75038 1416 aa21.61■■□□□ 1.05
CRAT-201ENST00000318080 SYCP2Q9BX26 1530 aa21.6■■□□□ 1.05
CRAT-201ENST00000318080 UBE2Q2Q8WVN8 375 aa21.6■■□□□ 1.05
CRAT-201ENST00000318080 ARHGEF12Q9NZN5 1544 aa21.6■■□□□ 1.05
CRAT-201ENST00000318080 MBD5Q9P267 1494 aa21.59■■□□□ 1.05
CRAT-201ENST00000318080 USP47Q96K76 1375 aa21.59■■□□□ 1.05
CRAT-201ENST00000318080 BCORL1Q5H9F3 1711 aa21.58■■□□□ 1.05
CRAT-201ENST00000318080 PZPP20742 1482 aa21.58■■□□□ 1.04
CRAT-201ENST00000318080 EFCAB2Q5VUJ9 269 aa21.56■■□□□ 1.04
CRAT-201ENST00000318080 RNF123Q5XPI4 1314 aa21.56■■□□□ 1.04
CRAT-201ENST00000318080 PNISRQ8TF01 805 aaKnown RBP21.55■■□□□ 1.04
CRAT-201ENST00000318080 ABCA9Q8IUA7 1624 aa21.55■■□□□ 1.04
CRAT-201ENST00000318080 PKD2Q13563 968 aa21.54■■□□□ 1.04
CRAT-201ENST00000318080 AFAP1Q8N556 730 aa21.53■■□□□ 1.04
CRAT-201ENST00000318080 C9orf84Q5VXU9 1444 aa21.53■■□□□ 1.04
CRAT-201ENST00000318080 TRAPPC8Q9Y2L5 1435 aa21.52■■□□□ 1.04
CRAT-201ENST00000318080 CROCC2H7BZ55 1655 aa21.52■■□□□ 1.03
CRAT-201ENST00000318080 TSPY4P0CV99 314 aa21.51■■□□□ 1.03
CRAT-201ENST00000318080 TSPY10P0CW01 314 aa21.51■■□□□ 1.03
CRAT-201ENST00000318080 FANCAO15360 1455 aa21.51■■□□□ 1.03
CRAT-201ENST00000318080 TMC1Q8TDI8 760 aa21.51■■□□□ 1.03
CRAT-201ENST00000318080 POLR1AO95602 1720 aaPredicted RBP21.5■■□□□ 1.03
CRAT-201ENST00000318080 CD109Q6YHK3 1445 aa21.5■■□□□ 1.03
CRAT-201ENST00000318080 SKAP1Q86WV1 359 aa21.49■■□□□ 1.03
CRAT-201ENST00000318080 CCDC141Q6ZP82 1450 aa21.49■■□□□ 1.03
CRAT-201ENST00000318080 NEFMP07197 916 aa21.48■■□□□ 1.03
CRAT-201ENST00000318080 FAM69CQ0P6D2 419 aa21.47■■□□□ 1.03
CRAT-201ENST00000318080 KDM2AQ9Y2K7 1162 aa21.47■■□□□ 1.03
CRAT-201ENST00000318080 ABCC1P33527 1531 aa21.46■■□□□ 1.03
CRAT-201ENST00000318080 KIAA1107Q9UPP5 1409 aa21.46■■□□□ 1.03
CRAT-201ENST00000318080 ARHGEF5Q12774 1597 aa21.45■■□□□ 1.02
CRAT-201ENST00000318080 CARD11Q9BXL7 1154 aa21.44■■□□□ 1.02
CRAT-201ENST00000318080 ANKRD30AQ9BXX3 1397 aa21.44■■□□□ 1.02
CRAT-201ENST00000318080 ST20-MTHFSA0A0A6YYL1 179 aa21.43■■□□□ 1.02
CRAT-201ENST00000318080 SCAPERQ9BY12 1400 aa21.43■■□□□ 1.02
CRAT-201ENST00000318080 KIF15Q9NS87 1388 aa21.43■■□□□ 1.02
CRAT-201ENST00000318080 ADGBQ8N7X0 1667 aa21.42■■□□□ 1.02
CRAT-201ENST00000318080 ADGRL2O95490 1459 aa21.42■■□□□ 1.02
CRAT-201ENST00000318080 EXOC6Q8TAG9 804 aa21.42■■□□□ 1.02
CRAT-201ENST00000318080 ADGRL1O94910 1474 aa21.42■■□□□ 1.02
CRAT-201ENST00000318080 KDM5CP41229 1560 aa21.42■■□□□ 1.02
CRAT-201ENST00000318080 BRPF3Q9ULD4 1205 aa21.42■■□□□ 1.02
CRAT-201ENST00000318080 SHANK2Q9UPX8 1470 aa21.4■■□□□ 1.02
CRAT-201ENST00000318080 EIF5BO60841 1220 aaKnown RBP21.4■■□□□ 1.02
CRAT-201ENST00000318080 ANKRD50Q9ULJ7 1429 aa21.39■■□□□ 1.01
CRAT-201ENST00000318080 PLEKHH2Q8IVE3 1493 aa21.38■■□□□ 1.01
CRAT-201ENST00000318080 ARAP3Q8WWN8 1544 aa21.38■■□□□ 1.01
CRAT-201ENST00000318080 RAPGEF3O95398 923 aa21.37■■□□□ 1.01
CRAT-201ENST00000318080 TSPOAP1O95153 1857 aa21.37■■□□□ 1.01
CRAT-201ENST00000318080 SPAG9O60271 1321 aaKnown RBP21.36■■□□□ 1.01
CRAT-201ENST00000318080 DIP2BQ9P265 1576 aa21.36■■□□□ 1.01
CRAT-201ENST00000318080 RRP1P56182 461 aaKnown RBP21.36■■□□□ 1.01
CRAT-201ENST00000318080 RSPH4AQ5TD94 716 aa21.36■■□□□ 1.01
CRAT-201ENST00000318080 NUP155O75694 1391 aa21.35■■□□□ 1.01
CRAT-201ENST00000318080 LRPPRCP42704 1394 aaKnown RBP21.35■■□□□ 1.01
CRAT-201ENST00000318080 SLC4A3P48751 1232 aa21.35■■□□□ 1.01
CRAT-201ENST00000318080 DCAF11Q8TEB1 546 aa21.35■■□□□ 1.01
CRAT-201ENST00000318080 ARID4BQ4LE39 1312 aaPredicted RBP21.34■■□□□ 1.01
CRAT-201ENST00000318080 MAP3K4Q9Y6R4 1608 aa21.32■■□□□ 1
CRAT-201ENST00000318080 MYBBP1AQ9BQG0 1328 aaKnown RBP21.32■■□□□ 1
CRAT-201ENST00000318080 PDE4AP27815 886 aa21.32■■□□□ 1
CRAT-201ENST00000318080 CDCA7LQ96GN5 454 aa21.32■■□□□ 1
CRAT-201ENST00000318080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.31■■□□□ 1
CRAT-201ENST00000318080 RCAN3Q9UKA8 241 aa21.31■■□□□ 1
CRAT-201ENST00000318080 RALGAPBQ86X10 1494 aa21.3■■□□□ 1
CRAT-201ENST00000318080 UHRF1BP1Q6BDS2 1440 aa21.3■■□□□ 1
CRAT-201ENST00000318080 ROCK2O75116 1388 aaKnown RBP21.29■■□□□ 1
CRAT-201ENST00000318080 PLIN1O60240 522 aa21.29■■□□□ 1
CRAT-201ENST00000318080 MAST1Q9Y2H9 1570 aa21.28■■□□□ 1
CRAT-201ENST00000318080 DAXXQ9UER7 740 aaPredicted RBP21.28■■□□□ 1
CRAT-201ENST00000318080 ZFYVE16Q7Z3T8 1539 aa21.28■■□□□ 1
CRAT-201ENST00000318080 BRD4O60885 1362 aaPredicted RBP21.28■■□□□ 1
CRAT-201ENST00000318080 GLI2P10070 1586 aa21.26■□□□□ 0.99
CRAT-201ENST00000318080 RALBP1Q15311 655 aa21.26■□□□□ 0.99
CRAT-201ENST00000318080 DNAJC5Q9H3Z4 198 aa21.26■□□□□ 0.99
CRAT-201ENST00000318080 KIF13AQ9H1H9 1805 aa21.25■□□□□ 0.99
CRAT-201ENST00000318080 ATP7AQ04656 1500 aa21.24■□□□□ 0.99
CRAT-201ENST00000318080 POGZQ7Z3K3 1410 aa21.24■□□□□ 0.99
CRAT-201ENST00000318080 NBPF1Q3BBV0 1214 aa21.24■□□□□ 0.99
CRAT-201ENST00000318080 PLXNC1O60486 1568 aa21.23■□□□□ 0.99
CRAT-201ENST00000318080 PPRC1Q5VV67 1664 aaKnown RBP21.23■□□□□ 0.99
CRAT-201ENST00000318080 RGL3Q3MIN7 710 aa21.22■□□□□ 0.99
CRAT-201ENST00000318080 ZNF518AQ6AHZ1 1483 aa21.21■□□□□ 0.99
CRAT-201ENST00000318080 INO80Q9ULG1 1556 aaPredicted RBP21.21■□□□□ 0.99
CRAT-201ENST00000318080 CC2D1BQ5T0F9 858 aaKnown RBP21.21■□□□□ 0.99
CRAT-201ENST00000318080 BACH2Q9BYV9 841 aa21.21■□□□□ 0.99
CRAT-201ENST00000318080 NEO1Q92859 1461 aa21.2■□□□□ 0.99
CRAT-201ENST00000318080 PLEKHG5O94827 1062 aa21.2■□□□□ 0.98
CRAT-201ENST00000318080 KIDINS220Q9ULH0 1771 aa21.2■□□□□ 0.98
CRAT-201ENST00000318080 NLRP13Q86W25 1043 aa21.19■□□□□ 0.98
CRAT-201ENST00000318080 TCERG1O14776 1098 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms