RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 TRAPPC8Q9Y2L5 1435 aa21.6■■□□□ 1.05
TSC22D3-201ENST00000315660 ARAP3Q8WWN8 1544 aa21.59■■□□□ 1.05
TSC22D3-201ENST00000315660 PLA2R1Q13018 1463 aa21.59■■□□□ 1.05
TSC22D3-201ENST00000315660 MAGI2Q86UL8 1455 aa21.59■■□□□ 1.05
TSC22D3-201ENST00000315660 CARD11Q9BXL7 1154 aa21.59■■□□□ 1.05
TSC22D3-201ENST00000315660 ARID4BQ4LE39 1312 aaPredicted RBP21.58■■□□□ 1.04
TSC22D3-201ENST00000315660 WDR7Q9Y4E6 1490 aa21.56■■□□□ 1.04
TSC22D3-201ENST00000315660 CCDC184Q52MB2 194 aa21.56■■□□□ 1.04
TSC22D3-201ENST00000315660 HNRNPUQ00839 825 aaKnown RBP eCLIP21.55■■□□□ 1.04
TSC22D3-201ENST00000315660 NEFLP07196 543 aa21.53■■□□□ 1.04
TSC22D3-201ENST00000315660 DHX29Q7Z478 1369 aaKnown RBP21.52■■□□□ 1.04
TSC22D3-201ENST00000315660 SPAG9O60271 1321 aaKnown RBP21.52■■□□□ 1.03
TSC22D3-201ENST00000315660 RTEL1-TNFRSF6BF6WH68 1400 aa21.51■■□□□ 1.03
TSC22D3-201ENST00000315660 PRAG1Q86YV5 1406 aa21.51■■□□□ 1.03
TSC22D3-201ENST00000315660 ATP10AO60312 1499 aa21.51■■□□□ 1.03
TSC22D3-201ENST00000315660 FKBP8Q14318 412 aa21.5■■□□□ 1.03
TSC22D3-201ENST00000315660 AFAP1Q8N556 730 aa21.5■■□□□ 1.03
TSC22D3-201ENST00000315660 POLR3GLQ9BT43 218 aa21.5■■□□□ 1.03
TSC22D3-201ENST00000315660 ROCK2O75116 1388 aaKnown RBP21.5■■□□□ 1.03
TSC22D3-201ENST00000315660 MRS2Q9HD23 443 aa21.49■■□□□ 1.03
TSC22D3-201ENST00000315660 ZFYVE16Q7Z3T8 1539 aa21.49■■□□□ 1.03
TSC22D3-201ENST00000315660 A2MP01023 1474 aa21.49■■□□□ 1.03
TSC22D3-201ENST00000315660 ST20-MTHFSA0A0A6YYL1 179 aa21.48■■□□□ 1.03
TSC22D3-201ENST00000315660 RGL3Q3MIN7 710 aa21.48■■□□□ 1.03
TSC22D3-201ENST00000315660 TRPM1Q7Z4N2 1603 aa21.48■■□□□ 1.03
TSC22D3-201ENST00000315660 ABCA9Q8IUA7 1624 aa21.47■■□□□ 1.03
TSC22D3-201ENST00000315660 FANCAO15360 1455 aa21.46■■□□□ 1.03
TSC22D3-201ENST00000315660 BCANQ96GW7 911 aa21.44■■□□□ 1.02
TSC22D3-201ENST00000315660 ASXL2Q76L83 1435 aa21.43■■□□□ 1.02
TSC22D3-201ENST00000315660 FAM9BQ8IZU0 186 aa21.43■■□□□ 1.02
TSC22D3-201ENST00000315660 GPRASP1Q5JY77 1395 aa21.42■■□□□ 1.02
TSC22D3-201ENST00000315660 INO80Q9ULG1 1556 aaPredicted RBP21.41■■□□□ 1.02
TSC22D3-201ENST00000315660 ATP7AQ04656 1500 aa21.41■■□□□ 1.02
TSC22D3-201ENST00000315660 NBPF1Q3BBV0 1214 aa21.4■■□□□ 1.02
TSC22D3-201ENST00000315660 ADGRL1O94910 1474 aa21.39■■□□□ 1.01
TSC22D3-201ENST00000315660 DEPDC5O75140 1603 aa21.38■■□□□ 1.01
TSC22D3-201ENST00000315660 LAMC1P11047 1609 aa21.38■■□□□ 1.01
TSC22D3-201ENST00000315660 E9PCH4 1651 aa21.38■■□□□ 1.01
TSC22D3-201ENST00000315660 SCAPERQ9BY12 1400 aa21.38■■□□□ 1.01
TSC22D3-201ENST00000315660 EIF2AK4Q9P2K8 1649 aaKnown RBP21.38■■□□□ 1.01
TSC22D3-201ENST00000315660 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
TSC22D3-201ENST00000315660 ANP32EQ9BTT0 268 aa21.37■■□□□ 1.01
TSC22D3-201ENST00000315660 PRDM15P57071 1507 aaPredicted RBP21.35■■□□□ 1.01
TSC22D3-201ENST00000315660 CNGB1Q14028 1251 aaPredicted RBP21.35■■□□□ 1.01
TSC22D3-201ENST00000315660 ZBED9Q6R2W3 1325 aa21.35■■□□□ 1.01
TSC22D3-201ENST00000315660 TRPM2O94759 1503 aa21.34■■□□□ 1.01
TSC22D3-201ENST00000315660 PTPRTO14522 1441 aa21.33■■□□□ 1
TSC22D3-201ENST00000315660 VWDEQ8N2E2 1590 aa21.32■■□□□ 1
TSC22D3-201ENST00000315660 TET3O43151 1660 aa21.32■■□□□ 1
TSC22D3-201ENST00000315660 KANK1Q14678 1352 aa21.31■■□□□ 1
TSC22D3-201ENST00000315660 MYT1LQ9UL68 1186 aa21.31■■□□□ 1
TSC22D3-201ENST00000315660 SPHKAPQ2M3C7 1700 aa21.3■■□□□ 1
TSC22D3-201ENST00000315660 NPM1P06748 294 aaKnown RBP eCLIP21.3■■□□□ 1
TSC22D3-201ENST00000315660 KIF3BO15066 747 aa21.29■■□□□ 1
TSC22D3-201ENST00000315660 COL17A1Q9UMD9 1497 aaPredicted RBP21.28■■□□□ 1
TSC22D3-201ENST00000315660 KTN1Q86UP2 1357 aaKnown RBP21.28■■□□□ 1
TSC22D3-201ENST00000315660 RNF17Q9BXT8 1623 aaKnown RBP21.28■■□□□ 1
TSC22D3-201ENST00000315660 TESK2Q96S53 571 aa21.28■■□□□ 1
TSC22D3-201ENST00000315660 CEP152O94986 1710 aa21.27■■□□□ 1
TSC22D3-201ENST00000315660 CLTCL1P53675 1640 aa21.27■□□□□ 0.99
TSC22D3-201ENST00000315660 MROH1Q8NDA8 1641 aa21.26■□□□□ 0.99
TSC22D3-201ENST00000315660 MADDQ8WXG6 1647 aa21.26■□□□□ 0.99
TSC22D3-201ENST00000315660 RALBP1Q15311 655 aa21.25■□□□□ 0.99
TSC22D3-201ENST00000315660 STAC3Q96MF2 364 aa21.25■□□□□ 0.99
TSC22D3-201ENST00000315660 DISP3Q9P2K9 1392 aa21.24■□□□□ 0.99
TSC22D3-201ENST00000315660 KIDINS220Q9ULH0 1771 aa21.24■□□□□ 0.99
TSC22D3-201ENST00000315660 TMC1Q8TDI8 760 aa21.24■□□□□ 0.99
TSC22D3-201ENST00000315660 ZNF518AQ6AHZ1 1483 aa21.24■□□□□ 0.99
TSC22D3-201ENST00000315660 PNISRQ8TF01 805 aaKnown RBP21.23■□□□□ 0.99
TSC22D3-201ENST00000315660 MYBBP1AQ9BQG0 1328 aaKnown RBP21.22■□□□□ 0.99
TSC22D3-201ENST00000315660 CD109Q6YHK3 1445 aa21.21■□□□□ 0.99
TSC22D3-201ENST00000315660 BRD4O60885 1362 aaPredicted RBP21.21■□□□□ 0.99
TSC22D3-201ENST00000315660 TMF1P82094 1093 aa21.2■□□□□ 0.98
TSC22D3-201ENST00000315660 CFAP74Q9C0B2 1584 aa21.19■□□□□ 0.98
TSC22D3-201ENST00000315660 PER1O15534 1290 aaPredicted RBP21.19■□□□□ 0.98
TSC22D3-201ENST00000315660 ERICH6BQ5W0A0 696 aa21.18■□□□□ 0.98
TSC22D3-201ENST00000315660 RBM19Q9Y4C8 960 aaKnown RBP21.18■□□□□ 0.98
TSC22D3-201ENST00000315660 NEURL4Q96JN8 1562 aa21.18■□□□□ 0.98
TSC22D3-201ENST00000315660 POGZQ7Z3K3 1410 aa21.18■□□□□ 0.98
TSC22D3-201ENST00000315660 PARD3Q8TEW0 1356 aa21.17■□□□□ 0.98
TSC22D3-201ENST00000315660 EFCAB6Q5THR3 1501 aa21.17■□□□□ 0.98
TSC22D3-201ENST00000315660 IQGAP1P46940 1657 aa21.17■□□□□ 0.98
TSC22D3-201ENST00000315660 IRX6P78412 446 aaPredicted RBP21.17■□□□□ 0.98
TSC22D3-201ENST00000315660 LRPPRCP42704 1394 aaKnown RBP21.15■□□□□ 0.98
TSC22D3-201ENST00000315660 LMTK2Q8IWU2 1503 aa21.15■□□□□ 0.98
TSC22D3-201ENST00000315660 WASHC2CQ9Y4E1 1318 aa21.15■□□□□ 0.98
TSC22D3-201ENST00000315660 MLH3Q9UHC1 1453 aa21.14■□□□□ 0.97
TSC22D3-201ENST00000315660 SCAF11Q99590 1463 aaKnown RBP21.13■□□□□ 0.97
TSC22D3-201ENST00000315660 UGGT1Q9NYU2 1555 aa21.13■□□□□ 0.97
TSC22D3-201ENST00000315660 PPRC1Q5VV67 1664 aaKnown RBP21.13■□□□□ 0.97
TSC22D3-201ENST00000315660 SMG6Q86US8 1419 aaKnown RBP21.13■□□□□ 0.97
TSC22D3-201ENST00000315660 NLRP13Q86W25 1043 aa21.12■□□□□ 0.97
TSC22D3-201ENST00000315660 PANK3Q9H999 370 aa21.12■□□□□ 0.97
TSC22D3-201ENST00000315660 HECW2Q9P2P5 1572 aa21.1■□□□□ 0.97
TSC22D3-201ENST00000315660 FRMPD1Q5SYB0 1578 aa21.1■□□□□ 0.97
TSC22D3-201ENST00000315660 KIAA1210Q9ULL0 1709 aa21.09■□□□□ 0.97
TSC22D3-201ENST00000315660 MYOM2P54296 1465 aa21.09■□□□□ 0.97
TSC22D3-201ENST00000315660 NUDCQ9Y266 331 aa21.08■□□□□ 0.96
TSC22D3-201ENST00000315660 KIF1BO60333 1816 aa21.07■□□□□ 0.96
TSC22D3-201ENST00000315660 CDCA8Q53HL2 280 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms