RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 NISCHQ9Y2I1 1504 aa33.55■■■□□ 2.96
TSC22D3-201ENST00000315660 CCDC180Q9P1Z9 1646 aa28.8■■■□□ 2.2
TSC22D3-201ENST00000315660 ZCCHC6Q5VYS8 1495 aaKnown RBP28.32■■■□□ 2.12
TSC22D3-201ENST00000315660 SHROOM4Q9ULL8 1493 aa28.08■■■□□ 2.09
TSC22D3-201ENST00000315660 DCAF8L2P0C7V8 631 aa27.67■■■□□ 2.02
TSC22D3-201ENST00000315660 DCAF1Q9Y4B6 1507 aa27.64■■■□□ 2.02
TSC22D3-201ENST00000315660 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
TSC22D3-201ENST00000315660 MYO15BQ96JP2 1530 aa27.02■■□□□ 1.92
TSC22D3-201ENST00000315660 ABCC9O60706 1549 aa26.79■■□□□ 1.88
TSC22D3-201ENST00000315660 SCRIBQ14160 1630 aa26.75■■□□□ 1.87
TSC22D3-201ENST00000315660 NACADO15069 1562 aa26.69■■□□□ 1.86
TSC22D3-201ENST00000315660 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
TSC22D3-201ENST00000315660 RSF1Q96T23 1441 aaPredicted RBP26.36■■□□□ 1.81
TSC22D3-201ENST00000315660 RB1CC1Q8TDY2 1594 aa26.3■■□□□ 1.8
TSC22D3-201ENST00000315660 CECR2Q9BXF3 1484 aa26.1■■□□□ 1.77
TSC22D3-201ENST00000315660 MROH2BQ7Z745 1585 aa26.01■■□□□ 1.75
TSC22D3-201ENST00000315660 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
TSC22D3-201ENST00000315660 WIZO95785 1651 aa25.83■■□□□ 1.73
TSC22D3-201ENST00000315660 BAZ1AQ9NRL2 1556 aaPredicted RBP25.81■■□□□ 1.72
TSC22D3-201ENST00000315660 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
TSC22D3-201ENST00000315660 LOC105371045A0A1W2PR82 267 aa25.62■■□□□ 1.69
TSC22D3-201ENST00000315660 TRIM41Q8WV44 630 aa25.6■■□□□ 1.69
TSC22D3-201ENST00000315660 BICRAQ9NZM4 1560 aa25.57■■□□□ 1.68
TSC22D3-201ENST00000315660 TOP2AP11388 1531 aaKnown RBP25.51■■□□□ 1.67
TSC22D3-201ENST00000315660 PABPN1Q86U42 306 aaKnown RBP eCLIP25.48■■□□□ 1.67
TSC22D3-201ENST00000315660 EIF4G1Q04637 1599 aaKnown RBP25.4■■□□□ 1.66
TSC22D3-201ENST00000315660 CCDC88BA6NC98 1476 aa25.33■■□□□ 1.65
TSC22D3-201ENST00000315660 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
TSC22D3-201ENST00000315660 FAM9AQ8IZU1 332 aaPredicted RBP25.27■■□□□ 1.64
TSC22D3-201ENST00000315660 PEG3Q9GZU2 1588 aa25.23■■□□□ 1.63
TSC22D3-201ENST00000315660 PCGF6Q9BYE7 350 aa25.21■■□□□ 1.63
TSC22D3-201ENST00000315660 HRCP23327 699 aa25.19■■□□□ 1.62
TSC22D3-201ENST00000315660 ABCC8Q09428 1581 aa25.08■■□□□ 1.61
TSC22D3-201ENST00000315660 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
TSC22D3-201ENST00000315660 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
TSC22D3-201ENST00000315660 BAZ1BQ9UIG0 1483 aaKnown RBP24.95■■□□□ 1.58
TSC22D3-201ENST00000315660 TRIM26Q12899 539 aaPredicted RBP24.93■■□□□ 1.58
TSC22D3-201ENST00000315660 SOGA1O94964 1423 aa24.77■■□□□ 1.56
TSC22D3-201ENST00000315660 WRNQ14191 1432 aaPredicted RBP eCLIP24.77■■□□□ 1.56
TSC22D3-201ENST00000315660 EEA1Q15075 1411 aa24.72■■□□□ 1.55
TSC22D3-201ENST00000315660 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
TSC22D3-201ENST00000315660 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
TSC22D3-201ENST00000315660 SYNJ1O43426 1573 aa24.65■■□□□ 1.54
TSC22D3-201ENST00000315660 RUSC2Q8N2Y8 1516 aa24.65■■□□□ 1.54
TSC22D3-201ENST00000315660 CSRNP3Q8WYN3 585 aa24.62■■□□□ 1.53
TSC22D3-201ENST00000315660 TNIKQ9UKE5 1360 aa24.55■■□□□ 1.52
TSC22D3-201ENST00000315660 PPARGC1BQ86YN6 1023 aaKnown RBP24.53■■□□□ 1.52
TSC22D3-201ENST00000315660 CEP162Q5TB80 1403 aa24.51■■□□□ 1.51
TSC22D3-201ENST00000315660 GOLGA3Q08378 1498 aa24.48■■□□□ 1.51
TSC22D3-201ENST00000315660 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
TSC22D3-201ENST00000315660 UBTFP17480 764 aaKnown RBP24.42■■□□□ 1.5
TSC22D3-201ENST00000315660 CEP164Q9UPV0 1460 aa24.4■■□□□ 1.5
TSC22D3-201ENST00000315660 KIF21BO75037 1637 aa24.38■■□□□ 1.49
TSC22D3-201ENST00000315660 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
TSC22D3-201ENST00000315660 CFTRP13569 1480 aa24.35■■□□□ 1.49
TSC22D3-201ENST00000315660 ZEB1P37275 1124 aaPredicted RBP24.31■■□□□ 1.48
TSC22D3-201ENST00000315660 CUX1P39880 1505 aa24.25■■□□□ 1.47
TSC22D3-201ENST00000315660 RAPGEF2Q9Y4G8 1499 aa24.21■■□□□ 1.47
TSC22D3-201ENST00000315660 CC2D2AQ9P2K1 1620 aa24.19■■□□□ 1.46
TSC22D3-201ENST00000315660 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
TSC22D3-201ENST00000315660 CLIP1P30622 1438 aa24.15■■□□□ 1.46
TSC22D3-201ENST00000315660 CADPSQ9ULU8 1353 aa24.13■■□□□ 1.45
TSC22D3-201ENST00000315660 PRXQ9BXM0 1461 aa24.09■■□□□ 1.45
TSC22D3-201ENST00000315660 TTBK1Q5TCY1 1321 aaPredicted RBP24.08■■□□□ 1.45
TSC22D3-201ENST00000315660 ERICH3Q5RHP9 1530 aa24.07■■□□□ 1.44
TSC22D3-201ENST00000315660 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
TSC22D3-201ENST00000315660 VPS8Q8N3P4 1428 aa24.02■■□□□ 1.44
TSC22D3-201ENST00000315660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.92■■□□□ 1.42
TSC22D3-201ENST00000315660 RANGAP1P46060 587 aaPredicted RBP23.91■■□□□ 1.42
TSC22D3-201ENST00000315660 CUX2O14529 1486 aa23.88■■□□□ 1.41
TSC22D3-201ENST00000315660 FGD5Q6ZNL6 1462 aa23.88■■□□□ 1.41
TSC22D3-201ENST00000315660 FANCD2Q9BXW9 1451 aa23.88■■□□□ 1.41
TSC22D3-201ENST00000315660 CCER1Q8TC90 406 aaPredicted RBP23.87■■□□□ 1.41
TSC22D3-201ENST00000315660 APLP2Q06481 763 aa23.86■■□□□ 1.41
TSC22D3-201ENST00000315660 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
TSC22D3-201ENST00000315660 IGF1RP08069 1367 aa23.81■■□□□ 1.4
TSC22D3-201ENST00000315660 NESP48681 1621 aa23.77■■□□□ 1.4
TSC22D3-201ENST00000315660 DNMBPQ6XZF7 1577 aa23.75■■□□□ 1.39
TSC22D3-201ENST00000315660 CARMIL1Q5VZK9 1371 aa23.7■■□□□ 1.38
TSC22D3-201ENST00000315660 TOPBP1Q92547 1522 aa23.7■■□□□ 1.38
TSC22D3-201ENST00000315660 ARHGAP35Q9NRY4 1499 aa23.68■■□□□ 1.38
TSC22D3-201ENST00000315660 LAMC3Q9Y6N6 1575 aa23.68■■□□□ 1.38
TSC22D3-201ENST00000315660 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
TSC22D3-201ENST00000315660 ABCA10Q8WWZ4 1543 aa23.63■■□□□ 1.37
TSC22D3-201ENST00000315660 RAD54L2Q9Y4B4 1467 aa23.63■■□□□ 1.37
TSC22D3-201ENST00000315660 HNRNPUL2Q1KMD3 747 aaKnown RBP23.61■■□□□ 1.37
TSC22D3-201ENST00000315660 URB2Q14146 1524 aaKnown RBP23.55■■□□□ 1.36
TSC22D3-201ENST00000315660 KANK4Q5T7N3 995 aaPredicted RBP23.55■■□□□ 1.36
TSC22D3-201ENST00000315660 DNAJC5BQ9UF47 199 aa23.54■■□□□ 1.36
TSC22D3-201ENST00000315660 PDS5BQ9NTI5 1447 aa23.52■■□□□ 1.36
TSC22D3-201ENST00000315660 CUL7Q14999 1698 aa23.46■■□□□ 1.35
TSC22D3-201ENST00000315660 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
TSC22D3-201ENST00000315660 RRBP1Q9P2E9 1410 aaKnown RBP23.42■■□□□ 1.34
TSC22D3-201ENST00000315660 KIF21AQ7Z4S6 1674 aa23.4■■□□□ 1.34
TSC22D3-201ENST00000315660 MAP3K1Q13233 1512 aa23.4■■□□□ 1.34
TSC22D3-201ENST00000315660 PELP1Q8IZL8 1130 aaKnown RBP23.39■■□□□ 1.34
TSC22D3-201ENST00000315660 SCAF1Q9H7N4 1312 aaKnown RBP23.38■■□□□ 1.33
TSC22D3-201ENST00000315660 ABCA5Q8WWZ7 1642 aa23.38■■□□□ 1.33
TSC22D3-201ENST00000315660 TIAM1Q13009 1591 aa23.37■■□□□ 1.33
TSC22D3-201ENST00000315660 FHAD1B1AJZ9 1412 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms