RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 AMPHP49418 695 aa14.08□□□□□ -0.16
VCPIP1-201ENST00000310421 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
VCPIP1-201ENST00000310421 TRIM6-TRIM34B2RNG4 842 aa14.07□□□□□ -0.16
VCPIP1-201ENST00000310421 ROCK1Q13464 1354 aa14.07□□□□□ -0.16
VCPIP1-201ENST00000310421 NLRP13Q86W25 1043 aa14.07□□□□□ -0.16
VCPIP1-201ENST00000310421 CENPJQ9HC77 1338 aaPredicted RBP14.06□□□□□ -0.16
VCPIP1-201ENST00000310421 ANO8Q9HCE9 1232 aaPredicted RBP14.06□□□□□ -0.16
VCPIP1-201ENST00000310421 B4GALNT3Q6L9W6 998 aa14.05□□□□□ -0.16
VCPIP1-201ENST00000310421 ATP6V1DQ9Y5K8 247 aa14.05□□□□□ -0.16
VCPIP1-201ENST00000310421 KIF3BO15066 747 aa14.05□□□□□ -0.16
VCPIP1-201ENST00000310421 AMOTL1Q8IY63 956 aa14.05□□□□□ -0.16
VCPIP1-201ENST00000310421 APBB1O00213 710 aa14.04□□□□□ -0.16
VCPIP1-201ENST00000310421 GTF2E1P29083 439 aaPredicted RBP14.04□□□□□ -0.16
VCPIP1-201ENST00000310421 FHOD3Q2V2M9 1422 aa14.04□□□□□ -0.16
VCPIP1-201ENST00000310421 CEP89Q96ST8 783 aa14.04□□□□□ -0.16
VCPIP1-201ENST00000310421 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
VCPIP1-201ENST00000310421 FANCD2Q9BXW9 1451 aa14.04□□□□□ -0.16
VCPIP1-201ENST00000310421 EVC2Q86UK5 1308 aa14.04□□□□□ -0.16
VCPIP1-201ENST00000310421 TDRD9Q8NDG6 1382 aaKnown RBP14.03□□□□□ -0.16
VCPIP1-201ENST00000310421 SENP3-EIF4A1A0A087X0R7 540 aa14.02□□□□□ -0.16
VCPIP1-201ENST00000310421 C1orf141Q5JVX7 400 aa14.02□□□□□ -0.16
VCPIP1-201ENST00000310421 A0A0U1RQG5 324 aaPredicted RBP14.02□□□□□ -0.16
VCPIP1-201ENST00000310421 FRAT2O75474 233 aaPredicted RBP14.02□□□□□ -0.16
VCPIP1-201ENST00000310421 MIA2Q96PC5 1412 aa14.02□□□□□ -0.16
VCPIP1-201ENST00000310421 NOL10Q9BSC4 688 aaKnown RBP14.02□□□□□ -0.16
VCPIP1-201ENST00000310421 TPM3P06753 285 aa14.02□□□□□ -0.17
VCPIP1-201ENST00000310421 TCEAL9Q9UHQ7 104 aa14.02□□□□□ -0.17
VCPIP1-201ENST00000310421 KIF21BO75037 1637 aa14.01□□□□□ -0.17
VCPIP1-201ENST00000310421 TPM2P07951 284 aa14.01□□□□□ -0.17
VCPIP1-201ENST00000310421 WASHC2AQ641Q2 1341 aa14□□□□□ -0.17
VCPIP1-201ENST00000310421 SUPT6HQ7KZ85 1726 aaKnown RBP14□□□□□ -0.17
VCPIP1-201ENST00000310421 VGFO15240 615 aaPredicted RBP13.99□□□□□ -0.17
VCPIP1-201ENST00000310421 NEXNQ0ZGT2 675 aa13.99□□□□□ -0.17
VCPIP1-201ENST00000310421 COG3Q96JB2 828 aa13.99□□□□□ -0.17
VCPIP1-201ENST00000310421 NGEFQ8N5V2 710 aa13.99□□□□□ -0.17
VCPIP1-201ENST00000310421 TSR1Q2NL82 804 aaKnown RBP13.99□□□□□ -0.17
VCPIP1-201ENST00000310421 TRIM34Q9BYJ4 488 aa13.99□□□□□ -0.17
VCPIP1-201ENST00000310421 DDX11L8A8MPP1 907 aa13.99□□□□□ -0.17
VCPIP1-201ENST00000310421 VPS53Q5VIR6 699 aa13.99□□□□□ -0.17
VCPIP1-201ENST00000310421 PRM3Q9NNZ6 103 aa13.99□□□□□ -0.17
VCPIP1-201ENST00000310421 MYBBP1AQ9BQG0 1328 aaKnown RBP13.98□□□□□ -0.17
VCPIP1-201ENST00000310421 WWC1Q8IX03 1113 aa13.98□□□□□ -0.17
VCPIP1-201ENST00000310421 AKAP17AQ02040 695 aaKnown RBP13.98□□□□□ -0.17
VCPIP1-201ENST00000310421 TPM1P09493 284 aa13.98□□□□□ -0.17
VCPIP1-201ENST00000310421 TTC5Q8N0Z6 440 aa13.98□□□□□ -0.17
VCPIP1-201ENST00000310421 MARCH6O60337 910 aa13.97□□□□□ -0.17
VCPIP1-201ENST00000310421 GAPVD1Q14C86 1478 aa13.97□□□□□ -0.17
VCPIP1-201ENST00000310421 SPRYD3Q8NCJ5 442 aa13.96□□□□□ -0.17
VCPIP1-201ENST00000310421 HECW1Q76N89 1606 aa13.96□□□□□ -0.17
VCPIP1-201ENST00000310421 CCDC70Q6NSX1 233 aa13.96□□□□□ -0.18
VCPIP1-201ENST00000310421 MYOM3Q5VTT5 1437 aa13.95□□□□□ -0.18
VCPIP1-201ENST00000310421 SCAPERQ9BY12 1400 aa13.95□□□□□ -0.18
VCPIP1-201ENST00000310421 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.95□□□□□ -0.18
VCPIP1-201ENST00000310421 SLC4A10Q6U841 1118 aa13.95□□□□□ -0.18
VCPIP1-201ENST00000310421 H3BQV1 296 aa13.95□□□□□ -0.18
VCPIP1-201ENST00000310421 FOXD1Q16676 465 aa13.95□□□□□ -0.18
VCPIP1-201ENST00000310421 IFFO2Q5TF58 517 aa13.95□□□□□ -0.18
VCPIP1-201ENST00000310421 PTPRGP23470 1445 aa13.95□□□□□ -0.18
VCPIP1-201ENST00000310421 RUFY2Q8WXA3 655 aa13.94□□□□□ -0.18
VCPIP1-201ENST00000310421 HOOK1Q9UJC3 728 aaKnown RBP13.94□□□□□ -0.18
VCPIP1-201ENST00000310421 ATAD2BQ9ULI0 1458 aa13.94□□□□□ -0.18
VCPIP1-201ENST00000310421 RRBP1Q9P2E9 1410 aaKnown RBP13.94□□□□□ -0.18
VCPIP1-201ENST00000310421 SYNE3Q6ZMZ3 975 aa13.94□□□□□ -0.18
VCPIP1-201ENST00000310421 TOMM22Q9NS69 142 aa13.94□□□□□ -0.18
VCPIP1-201ENST00000310421 MFAP1P55081 439 aaKnown RBP13.93□□□□□ -0.18
VCPIP1-201ENST00000310421 GOLGA6L3A6NEY3 463 aa13.93□□□□□ -0.18
VCPIP1-201ENST00000310421 EVA1CP58658 441 aa13.93□□□□□ -0.18
VCPIP1-201ENST00000310421 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.93□□□□□ -0.18
VCPIP1-201ENST00000310421 SF3A1Q15459 793 aaKnown RBP13.93□□□□□ -0.18
VCPIP1-201ENST00000310421 STAC3Q96MF2 364 aa13.92□□□□□ -0.18
VCPIP1-201ENST00000310421 USP47Q96K76 1375 aa13.92□□□□□ -0.18
VCPIP1-201ENST00000310421 REC8O95072 547 aa13.92□□□□□ -0.18
VCPIP1-201ENST00000310421 TPD52L1Q16890 204 aaPredicted RBP13.92□□□□□ -0.18
VCPIP1-201ENST00000310421 ARHGAP5Q13017 1502 aa13.92□□□□□ -0.18
VCPIP1-201ENST00000310421 CPLX2Q6PUV4 134 aaKnown RBP13.92□□□□□ -0.18
VCPIP1-201ENST00000310421 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.18
VCPIP1-201ENST00000310421 E9PSI1 815 aa13.92□□□□□ -0.18
VCPIP1-201ENST00000310421 FYCO1Q9BQS8 1478 aa13.91□□□□□ -0.18
VCPIP1-201ENST00000310421 ANKRD20A12PQ8NF67 263 aa13.91□□□□□ -0.18
VCPIP1-201ENST00000310421 CTDP1Q9Y5B0 961 aaPredicted RBP13.91□□□□□ -0.18
VCPIP1-201ENST00000310421 TEFQ10587 303 aa13.91□□□□□ -0.18
VCPIP1-201ENST00000310421 DDX58O95786 925 aaKnown RBP13.9□□□□□ -0.18
VCPIP1-201ENST00000310421 DIAPH3Q9NSV4 1193 aa13.9□□□□□ -0.18
VCPIP1-201ENST00000310421 SKOR2Q2VWA4 1001 aaPredicted RBP13.9□□□□□ -0.18
VCPIP1-201ENST00000310421 CENPQQ7L2Z9 268 aaPredicted RBP13.89□□□□□ -0.19
VCPIP1-201ENST00000310421 EFCAB5A4FU69 1503 aa13.89□□□□□ -0.19
VCPIP1-201ENST00000310421 VPS37DQ86XT2 251 aa13.89□□□□□ -0.19
VCPIP1-201ENST00000310421 MEX3CQ5U5Q3 659 aaKnown RBP13.89□□□□□ -0.19
VCPIP1-201ENST00000310421 SLKQ9H2G2 1235 aaPredicted RBP13.89□□□□□ -0.19
VCPIP1-201ENST00000310421 C9orf78Q9NZ63 289 aaPredicted RBP13.88□□□□□ -0.19
VCPIP1-201ENST00000310421 AAMPQ13685 434 aa13.88□□□□□ -0.19
VCPIP1-201ENST00000310421 ERICH3Q5RHP9 1530 aa13.88□□□□□ -0.19
VCPIP1-201ENST00000310421 TRIM29Q14134 588 aa13.88□□□□□ -0.19
VCPIP1-201ENST00000310421 KANK4Q5T7N3 995 aaPredicted RBP13.88□□□□□ -0.19
VCPIP1-201ENST00000310421 ZKSCAN1P17029 563 aaPredicted RBP13.88□□□□□ -0.19
VCPIP1-201ENST00000310421 FAM184AQ8NB25 1140 aa13.88□□□□□ -0.19
VCPIP1-201ENST00000310421 CCDC47Q96A33 483 aaKnown RBP13.88□□□□□ -0.19
VCPIP1-201ENST00000310421 FGD5Q6ZNL6 1462 aa13.88□□□□□ -0.19
VCPIP1-201ENST00000310421 GOLGA6L19H0YKK7 550 aa13.87□□□□□ -0.19
VCPIP1-201ENST00000310421 IPO7O95373 1038 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms