RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 STRCP1A6NGW2 1772 aa19.5■□□□□ 0.71
SMIM4-201ENST00000307106 DEPDC5O75140 1603 aa19.48■□□□□ 0.71
SMIM4-201ENST00000307106 IQGAP1P46940 1657 aa19.48■□□□□ 0.71
SMIM4-201ENST00000307106 CFDP1Q9UEE9 299 aaPredicted RBP19.47■□□□□ 0.71
SMIM4-201ENST00000307106 TNRQ92752 1358 aa19.46■□□□□ 0.71
SMIM4-201ENST00000307106 RNF17Q9BXT8 1623 aaKnown RBP19.45■□□□□ 0.7
SMIM4-201ENST00000307106 PZPP20742 1482 aa19.44■□□□□ 0.7
SMIM4-201ENST00000307106 KDM5DQ9BY66 1539 aa19.44■□□□□ 0.7
SMIM4-201ENST00000307106 SYNMO15061 1565 aa19.44■□□□□ 0.7
SMIM4-201ENST00000307106 CCNB3Q8WWL7 1395 aa19.44■□□□□ 0.7
SMIM4-201ENST00000307106 FBXO31Q5XUX0 539 aaPredicted RBP19.43■□□□□ 0.7
SMIM4-201ENST00000307106 ANKLE2Q86XL3 938 aa19.43■□□□□ 0.7
SMIM4-201ENST00000307106 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMIM4-201ENST00000307106 MED14O60244 1454 aa19.42■□□□□ 0.7
SMIM4-201ENST00000307106 FAM135AQ9P2D6 1515 aa19.42■□□□□ 0.7
SMIM4-201ENST00000307106 UGGT1Q9NYU2 1555 aa19.42■□□□□ 0.7
SMIM4-201ENST00000307106 NPHP4O75161 1426 aaPredicted RBP19.42■□□□□ 0.7
SMIM4-201ENST00000307106 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
SMIM4-201ENST00000307106 TIAM1Q13009 1591 aa19.4■□□□□ 0.7
SMIM4-201ENST00000307106 DHX29Q7Z478 1369 aaKnown RBP19.39■□□□□ 0.69
SMIM4-201ENST00000307106 RTEL1-TNFRSF6BF6WH68 1400 aa19.39■□□□□ 0.69
SMIM4-201ENST00000307106 NLRP1Q9C000 1473 aa19.39■□□□□ 0.69
SMIM4-201ENST00000307106 CFAP65Q6ZU64 1925 aaKnown RBP19.38■□□□□ 0.69
SMIM4-201ENST00000307106 THEMISQ8N1K5 641 aaPredicted RBP19.38■□□□□ 0.69
SMIM4-201ENST00000307106 LRRC7Q96NW7 1537 aa19.38■□□□□ 0.69
SMIM4-201ENST00000307106 MBD5Q9P267 1494 aa19.38■□□□□ 0.69
SMIM4-201ENST00000307106 XIRP1Q702N8 1843 aaKnown RBP19.37■□□□□ 0.69
SMIM4-201ENST00000307106 ZC3H13Q5T200 1668 aaKnown RBP19.37■□□□□ 0.69
SMIM4-201ENST00000307106 ZNF644Q9H582 1327 aaPredicted RBP19.36■□□□□ 0.69
SMIM4-201ENST00000307106 KIF3BO15066 747 aa19.36■□□□□ 0.69
SMIM4-201ENST00000307106 MIA2Q96PC5 1412 aa19.35■□□□□ 0.69
SMIM4-201ENST00000307106 MTUS2Q5JR59 1369 aa19.34■□□□□ 0.69
SMIM4-201ENST00000307106 WASHC2CQ9Y4E1 1318 aa19.33■□□□□ 0.69
SMIM4-201ENST00000307106 RGS17Q9UGC6 210 aaPredicted RBP19.32■□□□□ 0.68
SMIM4-201ENST00000307106 UBR1Q8IWV7 1749 aa19.31■□□□□ 0.68
SMIM4-201ENST00000307106 EHBP1L1Q8N3D4 1523 aa19.3■□□□□ 0.68
SMIM4-201ENST00000307106 CCDC141Q6ZP82 1450 aa19.29■□□□□ 0.68
SMIM4-201ENST00000307106 CEP152O94986 1710 aa19.26■□□□□ 0.67
SMIM4-201ENST00000307106 SETD1AO15047 1707 aaKnown RBP19.25■□□□□ 0.67
SMIM4-201ENST00000307106 CAMSAP2Q08AD1 1489 aa19.24■□□□□ 0.67
SMIM4-201ENST00000307106 ABCC3O15438 1527 aa19.23■□□□□ 0.67
SMIM4-201ENST00000307106 CEP162Q5TB80 1403 aa19.22■□□□□ 0.67
SMIM4-201ENST00000307106 ERVK-7P63135 1459 aa19.21■□□□□ 0.67
SMIM4-201ENST00000307106 SCAF11Q99590 1463 aaKnown RBP19.21■□□□□ 0.67
SMIM4-201ENST00000307106 ARHGEF5Q12774 1597 aa19.2■□□□□ 0.66
SMIM4-201ENST00000307106 EIF2AK4Q9P2K8 1649 aaKnown RBP19.2■□□□□ 0.66
SMIM4-201ENST00000307106 POTEAQ6S8J7 498 aa19.19■□□□□ 0.66
SMIM4-201ENST00000307106 ROBO1Q9Y6N7 1651 aa19.19■□□□□ 0.66
SMIM4-201ENST00000307106 RSPH4AQ5TD94 716 aa19.18■□□□□ 0.66
SMIM4-201ENST00000307106 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
SMIM4-201ENST00000307106 MROH1Q8NDA8 1641 aa19.17■□□□□ 0.66
SMIM4-201ENST00000307106 FAM135BQ49AJ0 1406 aa19.16■□□□□ 0.66
SMIM4-201ENST00000307106 SLIT1O75093 1534 aa19.15■□□□□ 0.66
SMIM4-201ENST00000307106 NCOA2Q15596 1464 aa19.15■□□□□ 0.66
SMIM4-201ENST00000307106 ARHGAP23Q9P227 1491 aa19.15■□□□□ 0.66
SMIM4-201ENST00000307106 MAST1Q9Y2H9 1570 aa19.13■□□□□ 0.65
SMIM4-201ENST00000307106 TSPY4P0CV99 314 aa19.12■□□□□ 0.65
SMIM4-201ENST00000307106 TSPY10P0CW01 314 aa19.12■□□□□ 0.65
SMIM4-201ENST00000307106 PHLPP1O60346 1717 aa19.11■□□□□ 0.65
SMIM4-201ENST00000307106 PIK3C2BO00750 1634 aa19.11■□□□□ 0.65
SMIM4-201ENST00000307106 LTKP29376 864 aa19.11■□□□□ 0.65
SMIM4-201ENST00000307106 TXNDC2Q86VQ3 553 aa19.11■□□□□ 0.65
SMIM4-201ENST00000307106 MAP3K1Q13233 1512 aa19.08■□□□□ 0.64
SMIM4-201ENST00000307106 KDM5AP29375 1690 aaKnown RBP19.08■□□□□ 0.64
SMIM4-201ENST00000307106 LRRC9Q6ZRR7 1453 aa19.06■□□□□ 0.64
SMIM4-201ENST00000307106 EID1Q9Y6B2 187 aa19.06■□□□□ 0.64
SMIM4-201ENST00000307106 TMEM94Q12767 1356 aa19.06■□□□□ 0.64
SMIM4-201ENST00000307106 PRDM15P57071 1507 aaPredicted RBP19.03■□□□□ 0.64
SMIM4-201ENST00000307106 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
SMIM4-201ENST00000307106 TMEM2Q9UHN6 1383 aa19.01■□□□□ 0.63
SMIM4-201ENST00000307106 NWD1Q149M9 1564 aa19.01■□□□□ 0.63
SMIM4-201ENST00000307106 ARHGAP31Q2M1Z3 1444 aa19■□□□□ 0.63
SMIM4-201ENST00000307106 TET3O43151 1660 aa19■□□□□ 0.63
SMIM4-201ENST00000307106 EFCAB6Q5THR3 1501 aa19■□□□□ 0.63
SMIM4-201ENST00000307106 KCNA6P17658 529 aa18.99■□□□□ 0.63
SMIM4-201ENST00000307106 JCADQ9P266 1359 aa18.98■□□□□ 0.63
SMIM4-201ENST00000307106 PROSER2Q86WR7 435 aaPredicted RBP18.98■□□□□ 0.63
SMIM4-201ENST00000307106 RBM33Q96EV2 1170 aaKnown RBP18.98■□□□□ 0.63
SMIM4-201ENST00000307106 COL16A1Q07092 1604 aaPredicted RBP18.98■□□□□ 0.63
SMIM4-201ENST00000307106 CROCC2H7BZ55 1655 aa18.98■□□□□ 0.63
SMIM4-201ENST00000307106 CHD2O14647 1828 aaKnown RBP18.97■□□□□ 0.63
SMIM4-201ENST00000307106 NKTRP30414 1462 aaKnown RBP18.97■□□□□ 0.63
SMIM4-201ENST00000307106 MYO5BQ9ULV0 1848 aa18.96■□□□□ 0.63
SMIM4-201ENST00000307106 STAG3Q9UJ98 1225 aa18.96■□□□□ 0.63
SMIM4-201ENST00000307106 MSH6P52701 1360 aa18.94■□□□□ 0.62
SMIM4-201ENST00000307106 UPF1Q92900 1129 aaKnown RBP eCLIP18.94■□□□□ 0.62
SMIM4-201ENST00000307106 SLC26A8Q96RN1 970 aa18.94■□□□□ 0.62
SMIM4-201ENST00000307106 SHPRHQ149N8 1683 aa18.92■□□□□ 0.62
SMIM4-201ENST00000307106 LRP6O75581 1613 aa18.92■□□□□ 0.62
SMIM4-201ENST00000307106 SLAIN2Q9P270 581 aa18.91■□□□□ 0.62
SMIM4-201ENST00000307106 ERBINQ96RT1 1412 aa18.91■□□□□ 0.62
SMIM4-201ENST00000307106 ADGRB3O60242 1522 aa18.9■□□□□ 0.62
SMIM4-201ENST00000307106 TRIM52Q96A61 297 aa18.89■□□□□ 0.61
SMIM4-201ENST00000307106 KIF15Q9NS87 1388 aa18.89■□□□□ 0.61
SMIM4-201ENST00000307106 MYOM3Q5VTT5 1437 aa18.89■□□□□ 0.61
SMIM4-201ENST00000307106 IDI1Q13907 227 aa18.88■□□□□ 0.61
SMIM4-201ENST00000307106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.88■□□□□ 0.61
SMIM4-201ENST00000307106 MEX3CQ5U5Q3 659 aaKnown RBP18.87■□□□□ 0.61
SMIM4-201ENST00000307106 SPATA31A6Q5VVP1 1343 aa18.87■□□□□ 0.61
SMIM4-201ENST00000307106 ZNF772Q68DY9 489 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms